Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_L04
(511 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 190 2e-47
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 185 4e-46
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 157 1e-37
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 152 5e-36
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 149 4e-35
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 134 1e-30
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 130 1e-29
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 126 2e-28
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 122 5e-27
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 111 1e-23
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 99 5e-20
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 88 9e-17
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 75 1e-12
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 66 3e-10
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 66 4e-10
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 66 4e-10
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 65 8e-10
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 65 1e-09
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 61 1e-08
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 60 4e-08
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 52 6e-06
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 51 1e-05
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 48 9e-05
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 48 1e-04
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 43 0.004
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 38 0.13
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.23
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 36 0.40
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 34 1.6
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 34 2.2
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 33 2.8
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 33 2.8
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 33 2.8
UniRef50_A5KAX0 Cluster: Cation-transporting ATPase; n=1; Plasmo... 33 3.8
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 33 3.8
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 32 6.6
UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 32 6.6
UniRef50_Q2RMQ4 Cluster: 2-polyprenylphenol 6-hydroxylase; n=4; ... 32 8.7
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 8.7
UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA methyl... 32 8.7
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 32 8.7
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 32 8.7
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 190 bits (463), Expect = 2e-47
Identities = 91/108 (84%), Positives = 96/108 (88%)
Frame = +3
Query: 42 TEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRG 221
TEKAFQKQ VFL K K K +R +K+VGLGFKTPREAIEGTYIDKKCPFTGNVSIRG
Sbjct: 48 TEKAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIRG 106
Query: 222 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 365
RILTGVVQKMKMQRTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 107 RILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFR 154
Score = 60.1 bits (139), Expect = 3e-08
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 4/47 (8%)
Frame = +3
Query: 30 MADXTEKAFQKQATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRE 158
MAD TE++FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 1 MADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
Score = 55.6 bits (128), Expect = 6e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +1
Query: 370 VEIGDIVTIGECRPLSKTVRFNVLKV 447
VEIGD+VT+GECRPLSKTVRFNVLKV
Sbjct: 156 VEIGDVVTVGECRPLSKTVRFNVLKV 181
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 185 bits (451), Expect = 4e-46
Identities = 89/118 (75%), Positives = 101/118 (85%), Gaps = 6/118 (5%)
Frame = +3
Query: 30 MADX-TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 191
MAD TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 192 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 365
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +1
Query: 370 VEIGDIVTIGECRPLSKTVRFNVLKV 447
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 157 bits (382), Expect = 1e-37
Identities = 73/113 (64%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Frame = +3
Query: 42 TEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRG 221
+E+AFQKQ +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPFTG VSIRG
Sbjct: 9 SERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRG 68
Query: 222 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFRAR-GD 377
+ILTG V KM RTIVIRR YLHY+PKYNR+ KRH+N+ VH+SP FR + GD
Sbjct: 69 KILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGD 121
Score = 51.2 bits (117), Expect = 1e-05
Identities = 20/26 (76%), Positives = 26/26 (100%)
Frame = +1
Query: 370 VEIGDIVTIGECRPLSKTVRFNVLKV 447
V++GDIVT+G+CRP+SKTVRFNV+KV
Sbjct: 117 VQVGDIVTVGQCRPISKTVRFNVVKV 142
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 152 bits (368), Expect = 5e-36
Identities = 69/108 (63%), Positives = 84/108 (77%)
Frame = +3
Query: 42 TEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRG 221
+E+AFQKQ +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF G VSIRG
Sbjct: 9 SERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRG 65
Query: 222 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 365
RILTG V KM RTI+IRR+YLH++PKYNR+ KRH+N++ H+SP FR
Sbjct: 66 RILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR 113
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 379 GDIVTIGECRPLSKTVRFNVLKV 447
GD+VT+G+CRPLSKTVRFNVL+V
Sbjct: 117 GDVVTVGQCRPLSKTVRFNVLRV 139
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 149 bits (361), Expect = 4e-35
Identities = 68/109 (62%), Positives = 84/109 (77%), Gaps = 3/109 (2%)
Frame = +3
Query: 45 EKAFQKQATVFLNRKGGMKRKD---MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSI 215
++AFQKQ +F N K + +K +R+ K VGLGFK P++AIEG YIDKKCPFTGNVS+
Sbjct: 36 QRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNVSV 95
Query: 216 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCF 362
RG IL G+V KM RTI+IRRDYLHY+ KYNR+ KRHRN+ VH+SP F
Sbjct: 96 RGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAF 144
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +1
Query: 358 ASGHVEIGDIVTIGECRPLSKTVRFNVLKV 447
A G V+ GDIV G+CRPLSKTVRFNVLKV
Sbjct: 143 AFGPVKEGDIVVCGQCRPLSKTVRFNVLKV 172
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 134 bits (323), Expect = 1e-30
Identities = 63/114 (55%), Positives = 83/114 (72%), Gaps = 6/114 (5%)
Frame = +3
Query: 54 FQKQATVFLNRKG----GMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRG 221
+QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGNVSIRG
Sbjct: 11 YQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRG 70
Query: 222 RILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFRAR-GD 377
RIL GVV KM+RT+V+RR+YLHY+ KY R+ KRH N SVH SP + GD
Sbjct: 71 RILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPALDVKEGD 124
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1
Query: 370 VEIGDIVTIGECRPLSKTVRFNVLKV 447
V+ GD VT+GECRPLSKTVRFNVLKV
Sbjct: 120 VKEGDTVTVGECRPLSKTVRFNVLKV 145
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 130 bits (315), Expect = 1e-29
Identities = 74/146 (50%), Positives = 90/146 (61%), Gaps = 30/146 (20%)
Frame = +3
Query: 30 MADXTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCP 194
MA+ TEKAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 195 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 311
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 312 ---RFXKRHRNMSVHLSPCFRAR-GD 377
R+ KRH N+ H+SPCFR + GD
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFRVKEGD 146
Score = 45.6 bits (103), Expect = 7e-04
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +1
Query: 370 VEIGDIVTIGECRPLSKTVRFNVLKV 447
V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 142 VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 126 bits (305), Expect = 2e-28
Identities = 55/94 (58%), Positives = 71/94 (75%)
Frame = +3
Query: 81 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 260
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 261 RTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCF 362
RTI+IRR+YLH++ KY R+ KRH++++VH SP F
Sbjct: 65 RTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAF 98
Score = 41.9 bits (94), Expect = 0.008
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1
Query: 379 GDIVTIGECRPLSKTVRFNVLKV 447
GD V IG+CRPLSKT+R+NVL+V
Sbjct: 103 GDEVVIGQCRPLSKTIRYNVLEV 125
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 122 bits (294), Expect = 5e-27
Identities = 53/95 (55%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Frame = +3
Query: 96 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 275
+ +K KN+G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 276 RRDYLHYLPKYNRFXKRHRNMSVHLSPCFRAR-GD 377
RRDYLH++ KY RF KRH+N+ H SPCFR + GD
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFRVQEGD 110
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 340 PCICRLASGHVEIGDIVTIGECRPLSKTVRFNVLKV 447
PC C V+ GD+VTIG+CRPLSKT+RFNVL++
Sbjct: 97 PCHCSPCF-RVQEGDLVTIGQCRPLSKTIRFNVLRI 131
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 111 bits (266), Expect = 1e-23
Identities = 53/121 (43%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Frame = +3
Query: 48 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 227
K F +Q V + + R GFK P A YIDKKCPFTG+V++RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 228 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFRAR---GDW*YCNDR 398
GVV+KMK ++TIV+ +Y+HY KY R+ +RH N SVH+SPCF GD C +
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVHYSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGET 127
Query: 399 R 401
R
Sbjct: 128 R 128
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 99.1 bits (236), Expect = 5e-20
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = +3
Query: 81 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 260
N +G K R KN+GLGFKTPREAI+G Y+DKKCPFTG VSIRGRIL + + +MQ
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 261 RTIVIRRDYLHYL 299
TI++ RDYLH++
Sbjct: 91 STIIVARDYLHFV 103
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 88.2 bits (209), Expect = 9e-17
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +3
Query: 177 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLS 353
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLS 81
Score = 46.4 bits (105), Expect = 4e-04
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +1
Query: 373 EIGDIVTIGECRPLSKTVRFNVLKV 447
++GDIV I ECRP+SKTVRFNV+KV
Sbjct: 87 KVGDIVIIAECRPISKTVRFNVIKV 111
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 74.5 bits (175), Expect = 1e-12
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +3
Query: 108 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 287
+ R K++GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 288 LHYLPKYNRFXKRHRNMSVHLSPCFRAR-GD 377
Y KY R+ +R + H PC A+ GD
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPCIDAQEGD 90
Score = 32.7 bits (71), Expect = 5.0
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 379 GDIVTIGECRPLSKTVRFNVLKV 447
GD V I ECRPLSKT F V++V
Sbjct: 89 GDKVRIAECRPLSKTKSFVVIEV 111
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 66.5 bits (155), Expect = 3e-10
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 123 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 302
+++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 303 KYNRFXKRHRNMSVHLSPCFRAR-GD 377
KY R+ KR + H C A+ GD
Sbjct: 59 KYQRYEKRRSKIHAHNPACISAKVGD 84
Score = 37.1 bits (82), Expect = 0.23
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1
Query: 373 EIGDIVTIGECRPLSKTVRFNVLK 444
++GDIVTI ECRP+SKT F V+K
Sbjct: 81 KVGDIVTIVECRPISKTKSFVVVK 104
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 66.1 bits (154), Expect = 4e-10
Identities = 23/60 (38%), Positives = 42/60 (70%)
Frame = +3
Query: 180 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPC 359
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+ K+ R+ KR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Score = 37.1 bits (82), Expect = 0.23
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 364 GHVEIGDIVTIGECRPLSKTVRFNVLK 444
G V +GD V I ECRPLSKT+ F V++
Sbjct: 80 GDVNVGDSVRIMECRPLSKTITFCVIE 106
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 66.1 bits (154), Expect = 4e-10
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +3
Query: 123 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 302
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 303 KYNRFXKRHRNMSVHLSPCFRAR-GDW 380
KY R+ ++ RN+ HL C + GD+
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIKVNVGDY 114
Score = 31.9 bits (69), Expect = 8.7
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 370 VEIGDIVTIGECRPLSKTVRFNVL 441
V +GD V IGE RPL+K + F VL
Sbjct: 109 VNVGDYVVIGETRPLAKFISFVVL 132
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 65.3 bits (152), Expect = 8e-10
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 123 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 302
+N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 303 KYNRFXKRHRNMSVHLSPCFRAR-GD 377
KY R + + VH+ C + + GD
Sbjct: 60 KYERKATKIKKYHVHVPDCIKIKPGD 85
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +3
Query: 129 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 308
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 309 NRFXKRHRNMSVHLSPC 359
+RF KR + H C
Sbjct: 59 DRFMKRRSRVPAHAPDC 75
Score = 32.7 bits (71), Expect = 5.0
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 376 IGDIVTIGECRPLSKT 423
+GD VTI ECRPLSKT
Sbjct: 80 VGDTVTIAECRPLSKT 95
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 180 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPC 359
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+ +R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 360 FRAR-GD 377
+ GD
Sbjct: 84 ISVKEGD 90
Score = 35.9 bits (79), Expect = 0.53
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 370 VEIGDIVTIGECRPLSKTVRFNVLKV 447
V+ GD+V IGE P+SKTV+F VL V
Sbjct: 86 VKEGDVVVIGETMPISKTVKFTVLGV 111
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 59.7 bits (138), Expect = 4e-08
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 123 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 302
KN+G+ P ++ D CP+ G++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 303 KYNRFXKRHRNMSVHLSPCFRAR-GD 377
KYNR+ +R + M V + C + GD
Sbjct: 61 KYNRYERRRKRMRVRVPECIEVKPGD 86
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 52.4 bits (120), Expect = 6e-06
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 180 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPC 359
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+ R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 360 FRAR-GD 377
+ GD
Sbjct: 81 IPVKPGD 87
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 51.2 bits (117), Expect = 1e-05
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +3
Query: 123 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 299
+++G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 300 PKYNRFXKRHRNMSVHLSPCFRAR-GD 377
KY R + + + PC A+ GD
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCMEAKIGD 84
Score = 33.9 bits (74), Expect = 2.2
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 373 EIGDIVTIGECRPLSKTVRFNVLK 444
+IGDI+TI ECRPL+K F V++
Sbjct: 81 KIGDIITIAECRPLNKGSSFVVIE 104
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 48.4 bits (110), Expect = 9e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 123 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 299
+ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 300 PKYNRFXKRHRNMSVHL 350
K+ R+ + + H+
Sbjct: 60 TKFKRYARGRSRIHAHV 76
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 180 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPC 359
DKKCP G++ +RG G V K +T+ I ++LPKY R+ R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 360 FR 365
+
Sbjct: 76 LK 77
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 370 VEIGDIVTIGECRPLSKTVRFNVLKV 447
V IG IVT+GEC+PLSKTVRF + KV
Sbjct: 46 VHIGHIVTVGECQPLSKTVRFIMFKV 71
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 37.9 bits (84), Expect = 0.13
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 219 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFRARGD 377
GR L G V+Q KM +T+ ++ DY ++ PK F + VH S F GD
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENFCVTGD 77
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 37.1 bits (82), Expect = 0.23
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = -3
Query: 362 EARRQMHGHIPVPFXEPIVFG*VVKVIXXXXXXXXXXXXXXXAGEDAAADRNVASEGTLL 183
E+ R + +I V F ++F V++VI G+D +D N SE T
Sbjct: 88 ESWRDVGSNILVSFFVSVIFWNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFF 147
Query: 182 VNVGTLNRLSGSFE 141
VNV T N FE
Sbjct: 148 VNVRTFNGSFWGFE 161
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 36.3 bits (80), Expect = 0.40
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 373 EIGDIVTIGECRPLSKTVRFNVLKV 447
E+GD V I ECRP+SKT F +++V
Sbjct: 67 EVGDFVKIAECRPISKTKHFRLVEV 91
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 34.3 bits (75), Expect = 1.6
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 222 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVH 347
+I+TG V M +TI + D L PKY++F ++ R H
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAH 45
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 84 RKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTG 236
R G +R+D + H N G RE + GT+ K TG S G +TG
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTG 89
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 33.5 bits (73), Expect = 2.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 376 IGDIVTIGECRPLSKTVRFNVLKV 447
+GD VTI CRP S T RF ++K+
Sbjct: 51 VGDAVTIQPCRPRSATKRFEIIKI 74
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 33.5 bits (73), Expect = 2.8
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +1
Query: 373 EIGDIVTIGECRPLSKTVRFNVLKV 447
+IGD+V I E RPLSKT R+ V+++
Sbjct: 52 KIGDVVEIEETRPLSKTKRWRVVRI 76
Score = 31.9 bits (69), Expect = 8.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 228 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVH 347
LTG+V KM +T+V+ + L P Y ++ KR + H
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAH 45
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 33.5 bits (73), Expect = 2.8
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 364 GHVEIGDIVTIGECRPLSKTVRFNVLKV 447
G GD+V I ECRP+SKT + V KV
Sbjct: 55 GGAAAGDLVEIEECRPISKTKSWRVAKV 82
>UniRef50_A5KAX0 Cluster: Cation-transporting ATPase; n=1;
Plasmodium vivax|Rep: Cation-transporting ATPase -
Plasmodium vivax
Length = 1914
Score = 33.1 bits (72), Expect = 3.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 322 NGTGICPCICRLASGHVEIGDIVTIGECRPLSKTVRFNV 438
N T PC C L +G V + + + GE RP+ KT N+
Sbjct: 491 NSTMTMPCDCVLLTGQVLVDESLLTGESRPMKKTCISNL 529
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 33.1 bits (72), Expect = 3.8
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 376 IGDIVTIGECRPLSKTVRFNVLKV 447
+GDIV I E RPLSKT R+ V+K+
Sbjct: 64 VGDIVMIRETRPLSKTKRWVVVKI 87
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 32.3 bits (70), Expect = 6.6
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 210 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVH 347
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVH 49
>UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 342
Score = 32.3 bits (70), Expect = 6.6
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 45 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 224
EK Q + +N K+ +H + G+ + +E+I+ + DKK FTG + + G
Sbjct: 9 EKIIFSQLSTLINGLDCSKQSLEQHKEQEGIVYVKDKESIQSSSTDKKISFTGKI-LNGG 67
Query: 225 IL 230
IL
Sbjct: 68 IL 69
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 32.3 bits (70), Expect = 6.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 364 GHVEIGDIVTIGECRPLSKTVRFNVLKV 447
G +GD+V I ECRPLSK R+ + +
Sbjct: 57 GRANLGDVVRIIECRPLSKLKRWRLADI 84
>UniRef50_Q2RMQ4 Cluster: 2-polyprenylphenol 6-hydroxylase; n=4;
Rhodospirillaceae|Rep: 2-polyprenylphenol 6-hydroxylase
- Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 519
Score = 31.9 bits (69), Expect = 8.7
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -3
Query: 479 LKDFFEPLPFETFKTLNLTVLDKGLHSPIVTISPISTCPEARRQMHGHIPVPFXEPIVFG 300
L+D P PFE + T LD+ L S P+ + Q+H I P E
Sbjct: 92 LQDSLPPFPFEDVRRTVETELDRPLESAFSVFDPVPVAAASIAQVHFAITAPDAEGHTRE 151
Query: 299 *VVKVI 282
VKV+
Sbjct: 152 VAVKVL 157
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 31.9 bits (69), Expect = 8.7
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 82 TGKVA*RGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 201
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
>UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase); n=2;
Sulfolobus|Rep: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase) - Sulfolobus
solfataricus
Length = 378
Score = 31.9 bits (69), Expect = 8.7
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +3
Query: 72 VFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDK----KCPFTGNV-SIRGRILTG 236
+F+ + G ++ D +K++ + PR + T++++ KCP G + SI G + G
Sbjct: 221 LFVRVENGARKADDNINKHLKYFGECPRCGFQ-TFVEENCKTKCPVCGEIFSIIGPLYIG 279
Query: 237 VVQKMKMQRTIVIRRDYLHYLPKYNRFXK 323
+ M+ + I+ +YL +NR K
Sbjct: 280 PLYSMEFLKRIMDLYSNFNYLTSFNRIQK 308
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 31.9 bits (69), Expect = 8.7
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 361 SGHVEIGDIVTIGECRPLSKTVRFNVLKV 447
S V++GD++ ECRPLSK F++ KV
Sbjct: 53 SNAVKVGDMIEAIECRPLSKRKSFSLHKV 81
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 31.9 bits (69), Expect = 8.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 222 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVH 347
R+LTG V KM +T+ + D P Y +F +R + + H
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAH 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,569,630
Number of Sequences: 1657284
Number of extensions: 9024036
Number of successful extensions: 21815
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 21193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21805
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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