Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_L04
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   172   3e-43
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   172   3e-43
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   157   6e-39
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    31   0.91 
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    31   0.91 
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    31   0.91 

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  172 bits (418), Expect = 3e-43
 Identities = 84/115 (73%), Positives = 96/115 (83%), Gaps = 3/115 (2%)
 Frame = +3

Query: 30  MADXTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFT 200
           MAD  E+AFQKQ  V LNRK   G  K+K +R  ++VGLGFKTPREAI+GTYIDKKCP+T
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60

Query: 201 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 365
           G+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RF KRHRNMSVH SP FR
Sbjct: 61  GDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 115



 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +1

Query: 370 VEIGDIVTIGECRPLSKTVRFNVLKV 447
           VE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 117 VEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  172 bits (418), Expect = 3e-43
 Identities = 84/115 (73%), Positives = 96/115 (83%), Gaps = 3/115 (2%)
 Frame = +3

Query: 30  MADXTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFT 200
           MAD  E+AFQKQ  V LNRK   G  K+K +R  ++VGLGFKTPREAI+GTYIDKKCP+T
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60

Query: 201 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 365
           G+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RF KRHRNMSVH SP FR
Sbjct: 61  GDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 115



 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +1

Query: 370 VEIGDIVTIGECRPLSKTVRFNVLKV 447
           VE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 117 VEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  157 bits (382), Expect = 6e-39
 Identities = 76/114 (66%), Positives = 92/114 (80%), Gaps = 2/114 (1%)
 Frame = +3

Query: 30  MADX-TEKAFQKQ-ATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 203
           MAD  TE++F+KQ A V + RK    +K  R ++ +GLGF+ P EAI+GTYIDKKCP+TG
Sbjct: 1   MADQQTERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTG 60

Query: 204 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 365
           +V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RF KRHRNMSVH SP FR
Sbjct: 61  DVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 114



 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +1

Query: 370 VEIGDIVTIGECRPLSKTVRFNVLKV 447
           VE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 116 VEHGDIVTIGECRPLSKTVRFNVLKV 141


>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
           protein.
          Length = 1188

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 210 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHL 350
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
           isoform B protein.
          Length = 1188

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 210 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHL 350
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
           isoform A protein.
          Length = 1188

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 210 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFXKRHRNMSVHL 350
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,711,903
Number of Sequences: 53049
Number of extensions: 438642
Number of successful extensions: 963
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)