Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_K23
(665 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 163 3e-39
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 161 1e-38
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 155 9e-37
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 150 3e-35
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 148 1e-34
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 134 2e-30
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 119 7e-26
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 113 4e-24
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 112 6e-24
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 109 8e-23
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 107 2e-22
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 107 3e-22
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 102 9e-21
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 101 2e-20
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 99 1e-19
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 98 1e-19
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 98 2e-19
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 96 8e-19
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 96 8e-19
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 95 1e-18
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 95 2e-18
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 94 3e-18
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 94 3e-18
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 93 4e-18
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 93 4e-18
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 93 5e-18
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 93 7e-18
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 93 7e-18
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 92 1e-17
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 92 1e-17
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 91 2e-17
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 91 2e-17
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 91 2e-17
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 91 2e-17
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 91 2e-17
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 91 3e-17
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 90 4e-17
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 90 4e-17
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 90 5e-17
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 90 5e-17
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 89 7e-17
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 89 7e-17
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 89 9e-17
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 89 9e-17
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 89 9e-17
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 89 1e-16
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 89 1e-16
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 89 1e-16
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 88 2e-16
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 87 3e-16
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 87 4e-16
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 87 4e-16
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 87 4e-16
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 87 4e-16
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 87 4e-16
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 87 5e-16
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 87 5e-16
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 86 6e-16
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 86 6e-16
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 86 6e-16
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 86 6e-16
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 86 6e-16
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 86 8e-16
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 86 8e-16
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 85 1e-15
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 85 1e-15
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 85 1e-15
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 85 1e-15
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 85 1e-15
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 85 1e-15
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 85 1e-15
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 85 1e-15
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 85 2e-15
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 85 2e-15
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 85 2e-15
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 85 2e-15
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 84 3e-15
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 84 3e-15
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 84 3e-15
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 84 3e-15
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 84 3e-15
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 84 3e-15
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 84 3e-15
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 84 3e-15
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 84 3e-15
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 83 4e-15
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 83 4e-15
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 83 4e-15
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 83 4e-15
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 83 4e-15
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 83 4e-15
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 83 4e-15
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 83 6e-15
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 83 8e-15
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 83 8e-15
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 83 8e-15
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 82 1e-14
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 82 1e-14
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 82 1e-14
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 1e-14
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 1e-14
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 82 1e-14
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 82 1e-14
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 82 1e-14
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 54 1e-14
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 81 2e-14
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 81 2e-14
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 81 2e-14
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 81 2e-14
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 81 2e-14
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 81 2e-14
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 81 2e-14
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 81 2e-14
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 81 2e-14
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 81 3e-14
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 81 3e-14
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 81 3e-14
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 81 3e-14
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 81 3e-14
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 81 3e-14
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 81 3e-14
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 80 4e-14
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 80 4e-14
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 80 5e-14
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 80 5e-14
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 80 5e-14
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 80 5e-14
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 79 7e-14
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 79 7e-14
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 79 7e-14
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 79 7e-14
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 79 7e-14
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 79 1e-13
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 79 1e-13
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 79 1e-13
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 79 1e-13
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 79 1e-13
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 78 2e-13
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 78 2e-13
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 78 2e-13
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 78 2e-13
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 78 2e-13
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 78 2e-13
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 78 2e-13
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 78 2e-13
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 78 2e-13
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 78 2e-13
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 77 3e-13
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 77 3e-13
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 77 3e-13
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 77 3e-13
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 77 3e-13
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 77 3e-13
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 77 3e-13
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 77 3e-13
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 77 4e-13
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 77 4e-13
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 77 4e-13
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 77 4e-13
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 77 5e-13
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 77 5e-13
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 77 5e-13
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 76 7e-13
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 76 7e-13
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 76 7e-13
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 76 9e-13
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 76 9e-13
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 76 9e-13
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 76 9e-13
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 76 9e-13
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 76 9e-13
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 76 9e-13
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 76 9e-13
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 75 1e-12
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 75 1e-12
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 1e-12
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 75 1e-12
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 75 1e-12
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 75 1e-12
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 75 1e-12
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 75 2e-12
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 75 2e-12
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 75 2e-12
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 75 2e-12
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 75 2e-12
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 75 2e-12
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 75 2e-12
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 74 3e-12
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 74 3e-12
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 74 3e-12
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 74 4e-12
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 74 4e-12
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 74 4e-12
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 74 4e-12
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 73 5e-12
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 73 5e-12
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 5e-12
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 73 5e-12
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 73 5e-12
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 73 6e-12
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 73 6e-12
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 73 6e-12
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 73 6e-12
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 73 6e-12
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 73 6e-12
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 73 8e-12
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 73 8e-12
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 73 8e-12
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 72 1e-11
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 1e-11
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 72 1e-11
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 72 1e-11
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 72 1e-11
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 72 1e-11
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 72 1e-11
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 72 1e-11
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 72 1e-11
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 72 1e-11
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 72 1e-11
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 72 1e-11
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 72 1e-11
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 72 1e-11
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 71 2e-11
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 71 2e-11
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 71 2e-11
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 71 3e-11
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 71 3e-11
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 3e-11
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 71 3e-11
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 71 3e-11
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 71 3e-11
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 71 3e-11
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 71 3e-11
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 71 3e-11
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 71 3e-11
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 71 3e-11
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 71 3e-11
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 71 3e-11
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 70 4e-11
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 4e-11
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 70 4e-11
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 70 4e-11
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 70 4e-11
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 70 4e-11
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 70 4e-11
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 70 4e-11
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 70 6e-11
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 70 6e-11
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 70 6e-11
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 70 6e-11
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 70 6e-11
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 70 6e-11
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 70 6e-11
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 70 6e-11
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 70 6e-11
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 70 6e-11
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 70 6e-11
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 70 6e-11
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 69 8e-11
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 69 8e-11
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 69 8e-11
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 69 8e-11
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 69 8e-11
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 69 8e-11
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 69 8e-11
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 69 8e-11
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 69 8e-11
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 69 8e-11
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 69 8e-11
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 69 8e-11
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 69 1e-10
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 69 1e-10
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 69 1e-10
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 69 1e-10
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 69 1e-10
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 69 1e-10
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 69 1e-10
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 69 1e-10
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 69 1e-10
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 69 1e-10
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 69 1e-10
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 69 1e-10
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 69 1e-10
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 69 1e-10
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 69 1e-10
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 1e-10
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 69 1e-10
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 69 1e-10
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 69 1e-10
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 69 1e-10
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 69 1e-10
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 69 1e-10
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 68 2e-10
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 68 2e-10
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 68 2e-10
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 68 2e-10
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 68 2e-10
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 68 2e-10
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 68 2e-10
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 68 2e-10
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 68 2e-10
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 68 2e-10
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 68 2e-10
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 68 2e-10
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 68 2e-10
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 2e-10
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 68 2e-10
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 68 2e-10
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 68 2e-10
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 68 2e-10
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 68 2e-10
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 67 3e-10
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 67 3e-10
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 67 3e-10
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 67 3e-10
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 67 3e-10
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 67 3e-10
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 67 3e-10
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 67 3e-10
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 67 3e-10
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 67 4e-10
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 67 4e-10
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 67 4e-10
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 67 4e-10
UniRef50_Q03AA2 Cluster: Superfamily II DNA and RNA helicase; n=... 67 4e-10
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 67 4e-10
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 67 4e-10
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 67 4e-10
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 67 4e-10
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 67 4e-10
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 66 5e-10
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 66 5e-10
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 5e-10
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 66 5e-10
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 66 5e-10
UniRef50_Q5CXB0 Cluster: CG6539/Dhh1-like SF II RNA helicase; n=... 66 5e-10
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 66 5e-10
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 66 5e-10
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 66 5e-10
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 66 5e-10
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 66 5e-10
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 66 5e-10
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 66 5e-10
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 66 5e-10
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 7e-10
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 66 7e-10
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 66 7e-10
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 66 7e-10
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 66 7e-10
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 66 7e-10
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 66 7e-10
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 66 7e-10
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 66 7e-10
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 66 9e-10
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 66 9e-10
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 66 9e-10
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 66 9e-10
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 66 9e-10
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 66 9e-10
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 66 9e-10
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 66 9e-10
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 66 9e-10
UniRef50_A7U5X3 Cluster: DEAD-box helicase 18; n=7; Plasmodium|R... 66 9e-10
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 66 9e-10
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 66 9e-10
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 66 9e-10
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 66 9e-10
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 66 9e-10
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 65 1e-09
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 65 1e-09
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 65 1e-09
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 65 1e-09
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 65 1e-09
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 65 1e-09
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 65 2e-09
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 65 2e-09
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 65 2e-09
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 65 2e-09
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 65 2e-09
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 65 2e-09
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 65 2e-09
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 65 2e-09
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 65 2e-09
UniRef50_Q97PV7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 2e-09
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 64 2e-09
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 64 2e-09
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 64 2e-09
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 64 2e-09
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 64 3e-09
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 64 3e-09
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 64 3e-09
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 64 3e-09
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 64 3e-09
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 64 3e-09
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 64 3e-09
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 64 3e-09
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 64 3e-09
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 3e-09
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 64 4e-09
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 4e-09
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 64 4e-09
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 64 4e-09
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 63 5e-09
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 63 5e-09
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 5e-09
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 5e-09
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 63 5e-09
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 63 5e-09
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_Q8IBA2 Cluster: Putative uncharacterized protein MAL8P1... 63 5e-09
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 63 5e-09
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 63 5e-09
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 63 5e-09
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 63 5e-09
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 63 5e-09
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 63 5e-09
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 63 5e-09
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 63 7e-09
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 63 7e-09
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 63 7e-09
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 63 7e-09
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 63 7e-09
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 63 7e-09
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 7e-09
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 63 7e-09
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 51 7e-09
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 51 7e-09
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 62 9e-09
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 9e-09
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 62 9e-09
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 62 9e-09
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 9e-09
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 62 9e-09
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 62 9e-09
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 62 9e-09
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 62 9e-09
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 62 9e-09
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 62 9e-09
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 62 9e-09
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 62 9e-09
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 62 9e-09
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 9e-09
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 62 9e-09
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 62 1e-08
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 62 1e-08
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 62 1e-08
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 62 1e-08
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 62 1e-08
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 62 1e-08
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 62 1e-08
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 62 1e-08
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 62 2e-08
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 62 2e-08
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 62 2e-08
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 62 2e-08
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 62 2e-08
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 2e-08
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 2e-08
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 62 2e-08
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q2GSJ4 Cluster: Putative uncharacterized protein; n=2; ... 62 2e-08
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 2e-08
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 62 2e-08
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 2e-08
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 61 2e-08
UniRef50_A4RUB4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 61 2e-08
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 163 bits (396), Expect = 3e-39
Identities = 80/168 (47%), Positives = 114/168 (67%), Gaps = 1/168 (0%)
Frame = +3
Query: 165 SLPHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFD 344
++ HD+ RT+DV + EN++F S+LL + GL SGF+KPSPIQ +PLG+CGFD
Sbjct: 4 TIAHDLDAKERTKDVILDENISFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFD 63
Query: 345 LLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLN 521
L++++KSGTGKT+VFS IALE +N + LQV+IL PTREI QI DV++ +G H GL
Sbjct: 64 LIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLK 123
Query: 522 VEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+E +GG + + + HI VG+PGR+KHL+ + + V+LF
Sbjct: 124 IESFIGGRPLEDDL-KKSSKCHIAVGAPGRVKHLLKMGALTTNLVKLF 170
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 161 bits (392), Expect = 1e-38
Identities = 79/168 (47%), Positives = 114/168 (67%), Gaps = 1/168 (0%)
Frame = +3
Query: 165 SLPHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFD 344
++ H++ RT D++I E+VTF+ M LS+ L GL++ GF KPSPIQ +PLG+CGFD
Sbjct: 4 NIAHNLSAKERTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFD 63
Query: 345 LLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLN 521
L++ AKSGTGKT VF IIALE +++ + +QV+IL PTREI QI +VI +G GL
Sbjct: 64 LIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLK 123
Query: 522 VEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
VE +GG+++ + HI +G+PGR+KHLI ++ + V+LF
Sbjct: 124 VESFIGGVAM-DIDRKKLSNCHIAIGAPGRVKHLIDKGYLKMDHVRLF 170
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 155 bits (376), Expect = 9e-37
Identities = 81/171 (47%), Positives = 111/171 (64%), Gaps = 1/171 (0%)
Frame = +3
Query: 156 AVMSLPHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKC 335
A + H++++ TRT DV I V F+S+LLS+ L GL +SGFQ+PSPIQL +PLG+C
Sbjct: 3 ASVKAAHELQSRTRTDDVLISGGVEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRC 62
Query: 336 GFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHX 512
G DL+++AKSGTGKT VF+ IAL+ L L N QV++L PTREI QI V+ IGS
Sbjct: 63 GLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAME 122
Query: 513 GLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
GL +GG +++ HI +GSPGR+K LI + +S ++LF
Sbjct: 123 GLECHVFIGGRPISQD-KQHLKKCHIAIGSPGRIKQLIEMGALMVSSIRLF 172
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 150 bits (363), Expect = 3e-35
Identities = 80/166 (48%), Positives = 105/166 (63%), Gaps = 2/166 (1%)
Frame = +3
Query: 174 HDIRNS-TRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLL 350
HDI TRT DV + E F S+LLS L GL ++GF++PSP+QL +PLG+CG DL+
Sbjct: 45 HDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLI 104
Query: 351 LEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVE 527
++AKSGTGKT VFS IAL+ L L N Q++IL PTREI QI VI IG GL
Sbjct: 105 VQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECH 164
Query: 528 XVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+GG +++ HI VGSPGR+K LI +++N ++LF
Sbjct: 165 VFIGGTPLSQD-KTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLF 209
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 148 bits (359), Expect = 1e-34
Identities = 77/159 (48%), Positives = 102/159 (64%), Gaps = 1/159 (0%)
Frame = +3
Query: 192 TRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 371
TRT DV + E F S+LLS L GL ++GF++PSP+QL +PLG+CG DL+++AKSGT
Sbjct: 51 TRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110
Query: 372 GKTVVFSIIALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLS 548
GKT VFS IAL+ L L N Q++IL PTREI QI VI IG GL +GG
Sbjct: 111 GKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTP 170
Query: 549 VNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+++ HI VGSPGR+K LI +++N ++LF
Sbjct: 171 LSQD-KTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLF 208
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 134 bits (323), Expect = 2e-30
Identities = 68/143 (47%), Positives = 94/143 (65%), Gaps = 1/143 (0%)
Frame = +3
Query: 240 MLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL 419
M S+ L GL GFQ+PSPIQL +PLG+CGFDL++ AKSGTGKT+VF II+LE +++
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDI 60
Query: 420 N-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVV 596
+ + +QV+IL PTREI QI V +G L VE +GGL++ E I V
Sbjct: 61 DISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAI-ENDKKKVNNCQIAV 119
Query: 597 GSPGRLKHLIVXNHINLSDVQLF 665
G+PGR++HLI + + +V+LF
Sbjct: 120 GAPGRIRHLIDKGFLKVENVRLF 142
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 119 bits (286), Expect = 7e-26
Identities = 64/157 (40%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
RT DV+ ++ F+ M LSE L GL + F PSPIQ +PL K G DLL++AKSGTG
Sbjct: 12 RTADVEFDLSLQFSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSGTG 71
Query: 375 KTVVFSIIALEKLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV 551
KT+VF+++ E N + Q + + PTREI QI DV+ +IG + +GGL +
Sbjct: 72 KTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGLDI 131
Query: 552 NEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
++ VVG+PGR+ HLI N +N S +++
Sbjct: 132 SQD-RKNLQSCSAVVGTPGRINHLIKSNVLNTSQIKI 167
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 113 bits (272), Expect = 4e-24
Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
+T DV + TF L L G+ +GF+KPSPIQ +P+ G D+L AK+GTG
Sbjct: 36 QTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTG 95
Query: 375 KTVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV 551
KT F I LEK+ N +Q +I+ PTRE+ Q V++ +G H G++ GG ++
Sbjct: 96 KTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGK-HCGISCMVTTGGTNL 154
Query: 552 NEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+ I VHI+VG+PGR+ L +LSD LF
Sbjct: 155 RDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLF 192
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 112 bits (270), Expect = 6e-24
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
R + + N TF S+++ + TL L +S F +PSP+Q +P+G G D+L++AKSGTG
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 375 KTVVFSIIALEKLNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV 551
KT+VFS++A+E L+ + +Q +I+TPTREI QI + ++++ G +GG +
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 552 N-EXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
I IV+G+PGR+ L+ +N+S V F
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFF 168
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 109 bits (261), Expect = 8e-23
Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Frame = +3
Query: 171 PHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLL 350
P D+R +T DV + F L L G+ ++GF++PSPIQ +P+ G D+L
Sbjct: 20 PKDLR--PQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDIL 77
Query: 351 LEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVE 527
AK+GTGKT F I L ++N + + +Q +IL PTRE+ Q V K +G+H L V
Sbjct: 78 ARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVM 137
Query: 528 XVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHL 623
GG ++ + I VHI+VG+PGR+ L
Sbjct: 138 ITTGGTTLRDDILRLQQPVHILVGTPGRILDL 169
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 107 bits (257), Expect = 2e-22
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = +3
Query: 186 NSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 365
N RT DV + F L L G+ G++KPSPIQ +P+ G D+L AK+
Sbjct: 76 NRVRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKN 135
Query: 366 GTGKTVVFSIIALEKLNL-NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGG 542
GTGK+ + I LE+++L + +Q ++L PTRE+ Q+ + QI H G+ V GG
Sbjct: 136 GTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGG 195
Query: 543 LSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
++ + I VH+V+ +PGR+ L+ + VQ+
Sbjct: 196 TNLRDDIMRLDETVHVVIATPGRILDLMKKGVAKVDKVQI 235
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 107 bits (256), Expect = 3e-22
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
+ F+ + L+ L L GF P+PIQ +P+ G D L +A++GTGKT FS+ L
Sbjct: 26 IQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL 85
Query: 405 EKLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
KLNL+ Q +++ PTRE+ Q+ IK +G + GL V + GG S+ + +
Sbjct: 86 NKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSG 145
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQLF 665
HIVVG+PGR+K LI + ++L + F
Sbjct: 146 AHIVVGTPGRVKDLITRDRLHLDECHTF 173
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 102 bits (244), Expect = 9e-21
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Frame = +3
Query: 201 RDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 380
R V + +N F+++ LS L + GF+ +PIQ +PL G D++ +AK+G+GKT
Sbjct: 40 RGVPVSQN-EFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKT 98
Query: 381 VVFSIIALEKLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNE 557
FS+ L K+NL+ L Q +IL PTRE+ Q+ I+++G GL V + GG S E
Sbjct: 99 AAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGRE 158
Query: 558 XIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
V IVVG+PGRL + N I+LS V+
Sbjct: 159 QADALENGVQIVVGTPGRLADFVGRNRIDLSAVK 192
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 101 bits (242), Expect = 2e-20
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 2/168 (1%)
Frame = +3
Query: 165 SLPHDIRNS-TRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGF 341
++ H++ N RT DV+ + F+++ L + GL + F+ P+ IQ +P+ G
Sbjct: 4 AIAHNLANGQNRTSDVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGM 63
Query: 342 DLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGL 518
DLL+++KSGTGKT+++ + AL+ +L+ +V+++ PTRE+ Q+ D+ + +G
Sbjct: 64 DLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSF 123
Query: 519 NVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
V MGG V H+ +G+PGRL L +N+S V+L
Sbjct: 124 KVSSFMGGTDVTRD-REKLRNCHVAIGTPGRLLQLHEKGVLNMSMVKL 170
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 98.7 bits (235), Expect = 1e-19
Identities = 62/162 (38%), Positives = 97/162 (59%), Gaps = 6/162 (3%)
Frame = +3
Query: 195 RTRDVQI--VENV-TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 365
+T+D+Q +E V TF + LS+ L G+ S GF++PS IQ + G D+L +A+S
Sbjct: 43 QTQDLQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQS 102
Query: 366 GTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEX--VM 536
GTGKT F+I AL++++ N QV+IL P RE+ QI DV+K IG + LN+E +
Sbjct: 103 GTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQY---LNIEAFCCI 159
Query: 537 GGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
GG S E VHI++ +PGRL ++ +++ + ++L
Sbjct: 160 GGTSTQETREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRL 201
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 98.3 bits (234), Expect = 1e-19
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
D N T D VTFT + +++ L L SG+ P+PIQ +P G DLLL
Sbjct: 28 DTNNEAATTDATDENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLS 87
Query: 357 AKSGTGKTVVFSIIALEKL----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNV 524
A++G+GKT F I L++L + + + +ILTPTRE+ Q+ D ++ GL
Sbjct: 88 AQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFC 147
Query: 525 EXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
++GG N I V ++V +PGRL I ++LS +++
Sbjct: 148 VPLVGGAPYNGQITALKKGVQVIVATPGRLLDHINAGRVDLSSLEI 193
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 97.9 bits (233), Expect = 2e-19
Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
+TF + LSE L L GF++PSPIQ +P G D++ +A++GTGKT F + +
Sbjct: 6 LTFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIV 65
Query: 405 EKL-NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
E+L +Q ++LTPTRE+ Q+ + I +IG H + + GG S+ I
Sbjct: 66 ERLVPGQRAVQALVLTPTRELAIQVAEEITKIG-RHARVKTIAIYGGQSIERQIRSLRFG 124
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQL 662
V +V+G+PGR+ + + ++LS V++
Sbjct: 125 VDVVIGTPGRILDHLGRSTLDLSQVRM 151
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 95.9 bits (228), Expect = 8e-19
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Frame = +3
Query: 219 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 398
E TF +SE L + GF++P+PIQ +P G D+ +A++GTGKT F I
Sbjct: 3 ETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIP 62
Query: 399 ALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
+E+L+ +N +Q ++L+PTRE+ Q + ++ + GLNV + GG + +
Sbjct: 63 IIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALK 122
Query: 576 XXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
V +V+G+PGR+ I ++L V +F
Sbjct: 123 GTVQVVIGTPGRVIDHIKRGTLHLDSVTMF 152
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 95.9 bits (228), Expect = 8e-19
Identities = 52/151 (34%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFS 392
VE + F + LS+ L + + GF+KP+ IQ+ +PL ++++ +A++G+GKT F+
Sbjct: 3 VEYMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFA 62
Query: 393 IIALEKLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
I +E +N NNG++ +ILTPTRE+ Q+ D I+ + + L + + GG ++ I
Sbjct: 63 IPLIELVNENNGIEAIILTPTRELAIQVADEIESL-KGNKNLKIAKIYGGKAIYPQI-KA 120
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+IVVG+PGR+ I +NL +V+ F
Sbjct: 121 LKNANIVVGTPGRILDHINRGTLNLKNVKYF 151
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 95.1 bits (226), Expect = 1e-18
Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
+ F + + E +I GF++PSPIQ +P G D++ +A++GTGKT F I +
Sbjct: 6 IKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVV 65
Query: 405 EKLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
EK++ +Q +ILTPTRE+ Q+ I+++ S H + + GG S+ I V
Sbjct: 66 EKVSTGRHVQALILTPTRELAIQVSGEIQKL-SKHKKIRTLPIYGGQSIVHQIKALKQGV 124
Query: 585 HIVVGSPGR-LKHL----IVXNHIN 644
+V+G+PGR + HL ++ +H+N
Sbjct: 125 QVVIGTPGRIIDHLRRKTLILDHVN 149
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 94.7 bits (225), Expect = 2e-18
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + +S+ T+ L S GF++P+PIQ +P G D+L +A++GTGKT F I +EK
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 411 LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHI 590
+ G+Q +IL PTRE+ Q+ + +++ S G+ V V GG+ + I I
Sbjct: 64 VVGKQGVQSLILAPTRELAMQVAEQLREF-SRGQGVQVVTVFGGMPIERQIKALKKGPQI 122
Query: 591 VVGSPGR-LKHL 623
VVG+PGR + HL
Sbjct: 123 VVGTPGRVIDHL 134
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 93.9 bits (223), Expect = 3e-18
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Frame = +3
Query: 171 PHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLL 350
P D+R +T DV + F L L G+ G++ PS IQ +P+ G D+L
Sbjct: 66 PKDLR--IKTLDVTSTKGNEFEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDIL 122
Query: 351 LEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVE 527
AK+GTGK+ + I LE+L+L + +Q M++ PTRE+ Q+ + Q+ H G V
Sbjct: 123 ARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVM 182
Query: 528 XVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLI 626
GG ++ + + H+V+ +PGR+ LI
Sbjct: 183 ATTGGTNLRDDVMRLDDTGHVVIATPGRILDLI 215
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 93.9 bits (223), Expect = 3e-18
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
R + + + F S+ + E L + G+Q P+PIQ +PL G DLL A++GTG
Sbjct: 72 RNQTTDHTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTG 131
Query: 375 KTVVFSIIALEKLNL------NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVM 536
KT F+I L+ LN ++ +I+TPTRE+ QI + K G H GL +
Sbjct: 132 KTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYG-RHTGLTSTVIF 190
Query: 537 GGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
GG++ N + I++ +PGRL L+ H++L +++ F
Sbjct: 191 GGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFF 233
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 93.5 bits (222), Expect = 4e-18
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + LS + + S G+ + +PIQ +P+ G DL +A++GTGKT F I A+E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 411 LNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
++++ N Q +IL PTRE+ Q+C +K++ GL V V GG S+ I H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 588 IVVGSPGRL 614
IVVG+PGR+
Sbjct: 123 IVVGTPGRI 131
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 93.5 bits (222), Expect = 4e-18
Identities = 50/143 (34%), Positives = 78/143 (54%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F SM L L + GF+KP+PIQ+ +P+ G DL+ +A++GTGKT F I L +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 411 LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHI 590
+ GLQ ++L PTRE+ Q+ + I + S + V + GG S+ + I
Sbjct: 66 VIKGEGLQALVLCPTRELAVQVTEEISSL-SRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 591 VVGSPGRLKHLIVXNHINLSDVQ 659
+VG+PGRL + I+LS ++
Sbjct: 125 IVGTPGRLMDHMNRGTISLSPLK 147
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 93.1 bits (221), Expect = 5e-18
Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALE 407
F + L+E L +I GF+ P+ +Q +P L + DL+ A++GTGKT F ++
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 408 KLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
K++ NN Q +IL+PTRE+ QI + +K + G+NV V GG S+ E
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 585 HIVVGSPGRLKHLIVXNHINLSDV 656
I+V +PGR++ +I +++S +
Sbjct: 124 QIIVATPGRMQDMINRRLVDISQI 147
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 92.7 bits (220), Expect = 7e-18
Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
FT M + L L GF+KP+ IQ +P G D++ +A++GTGKT F+I L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 411 LNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
L+ + N +Q +++ PTRE+ QI D + +G + + ++GG+S + V+
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCS-KIALILGGVSYEKQKAALNSGVN 121
Query: 588 IVVGSPGRLKHLIVXNHINLSDVQLF 665
IVV +PGRL+ L+ N I+LS ++ F
Sbjct: 122 IVVATPGRLEDLLAQNKIDLSHIKTF 147
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 92.7 bits (220), Expect = 7e-18
Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 2/154 (1%)
Frame = +3
Query: 210 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 389
+IV+N F M L E L G+ + GF+KPS IQ + G+D++ +A+SGTGKT F
Sbjct: 30 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATF 87
Query: 390 SIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV-NEXI 563
+I L++L + Q ++L PTRE+ QI VI +G + G +GG +V NE
Sbjct: 88 AISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGD-YMGATCHACIGGTNVRNEMQ 146
Query: 564 XXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
HIVVG+PGR+ ++ +++ +++F
Sbjct: 147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMF 180
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 91.9 bits (218), Expect = 1e-17
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
N++F + +S+ + L GF P+ IQ +P G D++ ++++GTGKT FS+
Sbjct: 2 NLSFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPI 61
Query: 402 LEKLN-LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
LE+L+ +Q ++LTPTRE+ Q+ D + Q + GL + GG S++ +
Sbjct: 62 LERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVG-NSGLRTLAIYGGQSIDRQMLQLKR 120
Query: 579 XVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
VHIVVG+PGR+ L+ ++ L V+ F
Sbjct: 121 GVHIVVGTPGRVIDLLERGNLKLDQVKWF 149
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 91.9 bits (218), Expect = 1e-17
Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 9/144 (6%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
+ +F + L E L ++GF PSP+QL VPLG+ G D++ +AKSGTGKT+ F +IA
Sbjct: 36 SASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTMTFVVIA 95
Query: 402 LEKLNL-NNGLQVMILTPTREIXXQ----ICDVIKQI----GSHHXGLNVEXVMGGLSVN 554
LE+++ Q + L PTRE Q ++I++ G G+ ++GGL V
Sbjct: 96 LERVDAGRRRTQALALAPTRECAVQTHECFVEMIEKFKDMDGDARGGIETCLLVGGLPVK 155
Query: 555 EXIXXXXXXVHIVVGSPGRLKHLI 626
E H+VVG+PGR + ++
Sbjct: 156 EDRARLASQPHVVVGTPGRTRQML 179
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F SM LS+ + G++ G++ P+PIQ +P+ G D++ A++G+GKT F I EK
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 411 L---NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L G + +IL+PTRE+ Q IK+IG GL ++GG S++
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIG-RFTGLKSSVILGGDSMDNQFSAIHGN 158
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
I+V +PGR H+ + +NL ++
Sbjct: 159 PDIIVATPGRFLHICIEMDMNLKSIE 184
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 91.5 bits (217), Expect = 2e-17
Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
+T V E V F S+ L E L ++S GF + IQ +P G D+L EA++GTG
Sbjct: 5 KTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTG 64
Query: 375 KTVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV 551
KT F + AL K++ + Q+M+L PTRE+ Q+ + I+ G GL V + GG S
Sbjct: 65 KTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSY 124
Query: 552 NEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+VVG+PGRL + + L ++++
Sbjct: 125 GPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRV 161
>UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-box
corepressor DP103 alpha; n=2; Dictyostelium
discoideum|Rep: Similar to Mus musculus (Mouse).
DEAD-box corepressor DP103 alpha - Dictyostelium
discoideum (Slime mold)
Length = 837
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
RT D++I +N+TF+ +LL + L GL G+Q+PSPIQL +PLG G DL+ +AKSGTG
Sbjct: 33 RTNDIEIEDNITFSELLLQKEVLKGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSGTG 92
Query: 375 KTVVFSIIALE 407
KT+VF +IALE
Sbjct: 93 KTIVFGVIALE 103
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Frame = +3
Query: 435 VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV---------- 584
V+I+ PTREI QI DVIK I + + E +GGL+ N +
Sbjct: 152 VLIIAPTREIAVQIKDVIKSISKYCKRIKCEVFIGGLNSNNNKDENNNNILNNEDVNRLN 211
Query: 585 --HIVVGSPGRLKHLIVXNHINLSDVQL 662
I+VG+PG++K LI H+ +++
Sbjct: 212 GTQIIVGTPGKIKSLIENLHLRTDTLKM 239
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 91.1 bits (216), Expect = 2e-17
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Frame = +3
Query: 198 TRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 377
TR + + ++ F M LSE L G+ P+P+Q G DL++ +K+GTGK
Sbjct: 20 TRPAEYIADIGFDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGK 79
Query: 378 TVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN 554
T F + LEK+ + ++ +IL PTRE+ Q+ D +K + + H GL + + GG S+
Sbjct: 80 TAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKML-AKHKGLKIAAIYGGASMK 138
Query: 555 EXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+ I+VG+PGR V +HIN +++L
Sbjct: 139 QQEDALEEGTPIIVGTPGR-----VFDHINRGNLKL 169
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 91.1 bits (216), Expect = 2e-17
Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
Frame = +3
Query: 198 TRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 377
T DVQ N TF S+++ + TL +K +Q +P+G G D+L++AKSGTGK
Sbjct: 15 TLDVQ--SNCTFESLMIGQKTL--------EKLKSVQAKAIPVGLLGRDMLVQAKSGTGK 64
Query: 378 TVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN 554
T+VFS++A+E L+L + +Q +I+TPTREI QI + ++++ G GG+
Sbjct: 65 TLVFSVLAVENLDLKAHYIQKVIITPTREISTQIKETVRKLTP--AGARTSVYTGGIGHK 122
Query: 555 -EXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
I IV+G+PGR+ LI +++S V F
Sbjct: 123 LNVIDLKKTRPQIVIGTPGRVAQLIRMGAMDISHVDFF 160
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 90.6 bits (215), Expect = 3e-17
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
+TF ++ L E L L G+ P+PIQ +P+ G DLL A++GTGKT FSI L
Sbjct: 1 MTFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPIL 60
Query: 405 EKL---NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
+KL + G++ ++LTPTRE+ QI + + G + GL + GG+
Sbjct: 61 QKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYG-RYTGLKHAVIFGGVGQKPQTDALR 119
Query: 576 XXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+ I+V +PGRL LI I+LS + F
Sbjct: 120 SGIQILVATPGRLLDLISQGFISLSSLDFF 149
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 90.2 bits (214), Expect = 4e-17
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
++F M L L L + F P+PIQL +P G D+L EA++GTGKT F + AL
Sbjct: 8 LSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPAL 67
Query: 405 EKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
K++ + QV+++TPTRE+ Q+ + ++ + G+ V V GG +
Sbjct: 68 AKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQG 127
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQL 662
IVVG+PGRL L+ N + L +++
Sbjct: 128 TAIVVGTPGRLIDLLNKNVLQLDGLKV 154
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 90.2 bits (214), Expect = 4e-17
Identities = 56/159 (35%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Frame = +3
Query: 204 DVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 383
D +I + F + +S+ TL GL S F K + IQ +P+ G D+L AK+G+GKT+
Sbjct: 34 DPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTL 93
Query: 384 VFSIIALEKLNLN-----NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLS 548
F + +EKL +GL +I++PTRE+ QI +V+ +IGS H + V+GG
Sbjct: 94 AFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGS-HTSFSAGLVIGGKD 152
Query: 549 VNEXIXXXXXXVHIVVGSPGR-LKHLIVXNHINLSDVQL 662
V + ++I++G+PGR L+HL +N S++Q+
Sbjct: 153 VKFEL-ERISRINILIGTPGRILQHLDQAVGLNTSNLQM 190
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 89.8 bits (213), Expect = 5e-17
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +3
Query: 342 DLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGL 518
DL+++AKSGTGKT VFS+IALE ++L N QV+IL PTREI QI D I+ IG GL
Sbjct: 5 DLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEGL 64
Query: 519 NVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+GG HI VG+PGR+K LI + ++LF
Sbjct: 65 RSHVFIGGTLFGPD-RQKLKKCHIAVGTPGRIKQLIEYEVLKTGTIRLF 112
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 89.8 bits (213), Expect = 5e-17
Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + LS+ + + G++ PSPIQ +P G D+L +A++GTGKT F++ L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 411 LNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
LN QV++L PTRE+ Q+ + ++ + G V V GG S + + VH
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 588 IVVGSPGRLKHLIVXNHINLSDVQ 659
++VG+PGR+ + ++LS+++
Sbjct: 137 VIVGTPGRVIDHLERGTLDLSELK 160
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 89.4 bits (212), Expect = 7e-17
Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
V+FT L + L+ GF +P+PIQ +PL G DL+ +A++GTGKT F + L
Sbjct: 55 VSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLL 114
Query: 405 EKLNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
++ + +Q ++L PTRE+ Q+ D + S G NV V GG S +
Sbjct: 115 NNIDFSKKCVQALVLAPTRELAQQVGDALATY-SGDDGRNVLVVYGGSSYQAQVGGLRRG 173
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
+VVG+PGRL LI + L ++
Sbjct: 174 ARVVVGTPGRLLDLIRQGSLKLDQLK 199
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 89.4 bits (212), Expect = 7e-17
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
V FT + L+ + + GF++ +PIQ +PL G DL+ +A++GTGKT F I +
Sbjct: 2 VKFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMV 61
Query: 405 EKLN-LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
E + + G+Q +++ PTRE+ Q+ + + +IG G+ + GG +
Sbjct: 62 EAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVR-GIRSVAIYGGQDFRSQVKALEEL 120
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQL 662
HIVVG+PGRL + ++ SD+++
Sbjct: 121 PHIVVGTPGRLLEHMRREYVRTSDIRI 147
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 89.0 bits (211), Expect = 9e-17
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F SM LS L G++ G++ P+PIQ +PL G D++ A++G+GKT F I EK
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 411 LNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L + G + +IL+PTRE+ Q IK++G GL ++GG ++
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELG-RFTGLKATIILGGDNMENQFSAIHGN 156
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
I++ +PGR H+ + + L++++
Sbjct: 157 PDILIATPGRFLHICIEMDLQLNNIE 182
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 89.0 bits (211), Expect = 9e-17
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALE 407
F + LS+ L GL GF+ P+ IQ +P L K D + A++GTGKT F + L+
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 408 KLNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
+++N+ +Q +IL PTRE+ QIC ++Q+ H LNV V GG ++ I
Sbjct: 75 LIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGA 134
Query: 585 HIVVGSPGRLKHLIVXNHINL 647
I+V +PGRL L+ + L
Sbjct: 135 QIIVATPGRLMDLMKRREVKL 155
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 89.0 bits (211), Expect = 9e-17
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F +M LS L ++ G++ P+PIQ +PL G D++ AK+G+GKT F I EK
Sbjct: 40 FQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIPLFEK 99
Query: 411 L---NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L + +G + ++LTPTRE+ Q IKQ+G L V+GG S++
Sbjct: 100 LKQREIKSGARALVLTPTRELAIQTFKFIKQLGK-FTDLKTILVLGGDSMDSQFAAIHTL 158
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
I+V +PGR HL V + LS VQ
Sbjct: 159 PDIIVATPGRFLHLCVEMDLKLSSVQ 184
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 88.6 bits (210), Expect = 1e-16
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F + L L L G++ PSPIQ +P G DLL EA++GTGKT F++ L+
Sbjct: 45 SFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLD 104
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
+L+L QV++L PTRE+ Q+ + ++ + G +V V GG S+ +
Sbjct: 105 RLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARGA 164
Query: 585 HIVVGSPGRLKHLIVXNHINLSDV 656
H++VG+PGR+ I +NL +
Sbjct: 165 HVIVGTPGRVMDHIERKSLNLDSL 188
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 88.6 bits (210), Expect = 1e-16
Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
FT + L++ L L G+ P+PIQ +PL G DLL A++GTGKT F++ L +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 411 LNLN------NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
L + G + ++L+PTRE+ QI + + G H GL V + GG+ +
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGK-HMGLTVATIFGGVKYGPQMKAL 185
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
V +VV +PGRL + +L+ V++F
Sbjct: 186 AAGVDVVVATPGRLMDHLGEKSAHLNGVEIF 216
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 88.6 bits (210), Expect = 1e-16
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
Frame = +3
Query: 210 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 389
Q+ EN F S+ LS L GL S G+ KPSPIQ +P+ G D++ A +G+GKT F
Sbjct: 228 QMYEN--FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAF 285
Query: 390 SIIALEKLNLN----NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNE 557
I +E+L +V++L PTRE+ Q+ DV KQI G+ +GGL++ +
Sbjct: 286 MIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQ 345
Query: 558 XIXXXXXXVHIVVGSPGR-LKHLIVXNHINLSDVQL 662
IV+ +PGR + H+ N+ V++
Sbjct: 346 QEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEI 381
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 88.2 bits (209), Expect = 2e-16
Identities = 46/145 (31%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF + LS+ L + S GF++ +PIQ +P G D++ +A++GTGKT F + L+
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
K++ + +Q +++ PTRE+ Q+ + + +IG H + + + GG +N I
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKR-VRILPIYGGQDINRQIRALKKHP 121
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQ 659
HI+VG+PGR+ I + L +V+
Sbjct: 122 HIIVGTPGRILDHINRKTLRLQNVE 146
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 87.4 bits (207), Expect = 3e-16
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
+ N+ F + L E L + GF++PS IQ +P+ G D++ +A++GTGKT F
Sbjct: 1 MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGC 60
Query: 396 IALEKLNLN---NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIX 566
+ + + + +IL PTRE+ Q+ + + ++G H L+V + GG ++ I
Sbjct: 61 AIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEK-LSVLPIYGGQPIDRQIR 119
Query: 567 XXXXXVHIVVGSPGRLKHLIVXNHINLSDV 656
V IVVG+PGR+ LI + L+D+
Sbjct: 120 ALKNGVDIVVGTPGRVLDLIRRKSLPLNDI 149
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 87.0 bits (206), Expect = 4e-16
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 21 DTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAM 80
Query: 357 AKSGTGKTVVFSIIALEKL---NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVE 527
A++G+GKT F I E+L G + +IL+PTRE+ Q K++G L
Sbjct: 81 ARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELGK-FTKLKTA 139
Query: 528 XVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
++GG S+++ I++G+PGRL H+I ++ L +V+
Sbjct: 140 LILGGDSMDDQFAALHENPDIIIGTPGRLMHVIKEMNLKLQNVE 183
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 87.0 bits (206), Expect = 4e-16
Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + L+ L L +G+ KP+PIQ +PL G DLL A++GTGKT F++ L +
Sbjct: 9 FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHR 68
Query: 411 LNL------NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
L NG +V++L PTRE+ QI D + S H + V + GG+S +
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQIADGFESF-SRHQPVRVTTIFGGVSQVHQVKAL 127
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
V I+V +PGRL LI +LS ++
Sbjct: 128 EEGVDIIVAAPGRLLDLIEQGLCDLSQLE 156
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 87.0 bits (206), Expect = 4e-16
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 3/161 (1%)
Frame = +3
Query: 189 STRTRDVQIVENVT-FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 365
S+ RD + + +T F M LS+ L ++ F P+P+Q +P G D+L A++
Sbjct: 14 SSHKRDPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQT 73
Query: 366 GTGKTVVFSIIALEKLNLNN--GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMG 539
GTGKT+ F I ALE L G+QV+IL PTRE+ Q+ V +Q+ + VMG
Sbjct: 74 GTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKL-KSAALVMG 132
Query: 540 GLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
G S I +VV +PGRL+ + ++LS V++
Sbjct: 133 GTSERNQIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEM 173
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 87.0 bits (206), Expect = 4e-16
Identities = 43/145 (29%), Positives = 74/145 (51%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F L + + +G+ +P+ +Q +P+ G DL++ +K+G+GKT + I +
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 411 LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHI 590
G++ +IL PTRE+ Q+ V + +G G+ V GG+S+N+ I +I
Sbjct: 64 TAKEKGIRALILLPTRELAVQVAKVSEALGK-RSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 591 VVGSPGRLKHLIVXNHINLSDVQLF 665
+VG+PGR LI +N V F
Sbjct: 123 IVGTPGRTLDLIDRGILNFDKVSYF 147
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 87.0 bits (206), Expect = 4e-16
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Frame = +3
Query: 249 SEFTLXGLISS-----GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL 413
SEF + G I+ GF+ +PIQ +P+ G D++ EA++GTGKT F+I LE L
Sbjct: 7 SEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLENL 66
Query: 414 NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIV 593
Q +I+ PTRE+ Q+ + IK+IG + + V V GG S+ I VH++
Sbjct: 67 EAERVPQALIICPTRELCLQVSEEIKRIGK-YMKVKVLAVYGGQSIGNQIAQLRRGVHVI 125
Query: 594 VGSPGRLKHLIVXNHINLSDV 656
V +PGRL I ++L +
Sbjct: 126 VATPGRLIDHIERGTVDLGGI 146
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 86.6 bits (205), Expect = 5e-16
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 134 DTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVAM 193
Query: 357 AKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVE 527
A++G+GKT F I EKL ++ G + ++L+PTRE+ Q K++G GL +
Sbjct: 194 ARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGK-FTGLKMA 252
Query: 528 XVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
++GG + + I++ +PGRL H+ V ++ L V+
Sbjct: 253 LILGGDRMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLQSVE 296
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 86.6 bits (205), Expect = 5e-16
Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + LSE L L G++ PSPIQ +PL D+L +A++GTGKT F++ L +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 411 LNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
+++ Q ++L PTRE+ Q+ + ++ ++ G +V + GG S + VH
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
Query: 588 IVVGSPGRLKHLIVXNHINLSDVQ 659
+VVG+PGR+ + ++LS ++
Sbjct: 129 VVVGTPGRVIDHLEKGSLDLSRIK 152
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 86.2 bits (204), Expect = 6e-16
Identities = 43/123 (34%), Positives = 68/123 (55%)
Frame = +3
Query: 246 LSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 425
L +F L G+ +GF PSP+Q +P+ G DL+ +A++GTGKT F+I L LN N
Sbjct: 52 LKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTLNRNK 111
Query: 426 GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSP 605
++ +I+TPTRE+ QI + I ++G + + GG S+ ++ +P
Sbjct: 112 DIEALIITPTRELAMQISEEILKLG-RFGRIKTICMYGGQSIKRQCDLLEKKPKAMIATP 170
Query: 606 GRL 614
GRL
Sbjct: 171 GRL 173
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 86.2 bits (204), Expect = 6e-16
Identities = 49/129 (37%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F SE L L G+ PSPIQ P G DL+ +A++GTGKT F++ LE+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 411 LNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
L QV++L PTRE+ Q+ D K + H L V V GG I V
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVD 192
Query: 588 IVVGSPGRL 614
+VVG+PGR+
Sbjct: 193 VVVGTPGRV 201
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 86.2 bits (204), Expect = 6e-16
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + +SE L S +P+P+QL +P D++ +A++GTGKT+ F + LE+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 411 LNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
+N+ +Q +I+TPTRE+ QI K++ + G+N+ GG V + + +H
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKL-AEVKGINILAAYGGQDVEQQLRKLKGSIH 123
Query: 588 IVVGSPGRLKHLIVXNHINLSDVQL 662
I++G+PGRL + INL + +
Sbjct: 124 IIIGTPGRLLDHLRRKTINLGKLSM 148
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 86.2 bits (204), Expect = 6e-16
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLL-EAKSGTGKTVVFSIIALE 407
F M LS+ L + G++ P+PIQ +PL G + ++ +A++GTGKT F I +E
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
+L+ N +Q ++LTPTRE+ Q+C+ I + + LN+ V GG+S+ I V
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKR-LNLLPVYGGVSIGNQIRALKRRV 122
Query: 585 HIVVGSPGRL 614
+VVG+PGR+
Sbjct: 123 DLVVGTPGRI 132
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 86.2 bits (204), Expect = 6e-16
Identities = 46/146 (31%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF + LS+ + + GF++ +PIQ +PL D++ +A++GTGKT F I +E
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 408 KLNL-NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
K+N+ N+ +Q +++ PTRE+ Q+ + + +IG+ + V + GG + I
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKR-VRVLPIYGGQDIERQIRALKKHP 121
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQL 662
H++VG+PGR + +HIN ++L
Sbjct: 122 HVIVGTPGR-----IIDHINRGTLRL 142
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 85.8 bits (203), Expect = 8e-16
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
++ + M LS L ++ + +PSPIQ +PL G D+L +A++GTGKT F I
Sbjct: 3 DINYADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPI 62
Query: 402 LEKLN---LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
+E+L + Q +ILTPTRE+ Q+ D I ++ +H +NV V GG + +
Sbjct: 63 IERLEHGPNSRNPQALILTPTRELAVQVRDEIAKL-THGQRINVVAVYGGKPLRSQMEKL 121
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINL 647
HIVVG+PGR+ L+ + L
Sbjct: 122 KRAPHIVVGTPGRVIDLMTRRALQL 146
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 85.8 bits (203), Expect = 8e-16
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
+TF LS + + GF++ +PIQ +PLG D++ +A++GTGKT F I +
Sbjct: 3 ITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLV 62
Query: 405 EKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
EK+N + +Q +++ PTRE+ Q+ + + +IG V + GG + I
Sbjct: 63 EKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRA-KVLPIYGGQDIGRQIRALKKN 121
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDV 656
+I+VG+PGRL I I L++V
Sbjct: 122 PNIIVGTPGRLLDHINRRTIRLNNV 146
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 85.4 bits (202), Expect = 1e-15
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Frame = +3
Query: 252 EFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN--- 422
+FTL L G+++P+PIQ +PL G DLL EA++GTGKT F++ +EKL+ N
Sbjct: 16 QFTLKNL---GYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPID 72
Query: 423 --NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVV 596
++ ++L PTRE+ Q+ D + G G+ V V GG+ V I I+V
Sbjct: 73 GYRPVRALVLAPTRELAIQVADNTLEYG-RDLGMRVISVYGGVPVENQIKRLKRGTDILV 131
Query: 597 GSPGRLKHLIVXNHINLSDVQ 659
+PGRL L+ I+L ++
Sbjct: 132 ATPGRLLDLLRQKAISLEKLE 152
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 85.4 bits (202), Expect = 1e-15
Identities = 46/145 (31%), Positives = 81/145 (55%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F + + + L + F++P+ IQ +PL G D++ A +G+GKT+ F ++
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 408 KLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
K+ NG++ ++LTPTRE+ Q+ + +K+ S H L V + GG+++N I
Sbjct: 63 KIEKGNGIRALVLTPTRELAEQVQNSLKEF-SRHKQLRVAPIYGGVAINPQI-RQLERAD 120
Query: 588 IVVGSPGRLKHLIVXNHINLSDVQL 662
+VV +PGRL I I+L DV++
Sbjct: 121 VVVATPGRLLDHIERGTIDLGDVEI 145
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 85.0 bits (201), Expect = 1e-15
Identities = 48/132 (36%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Frame = +3
Query: 270 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMIL 446
L +G+++P+PIQ +PL G+D+L +A +GTGKT F+I +EKL ++ ++L
Sbjct: 15 LEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVL 74
Query: 447 TPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXI-XXXXXXVHIVVGSPGRLKHL 623
TPTRE+ Q+ + I + + + L+ GG SV + + V I++G+PGR+K L
Sbjct: 75 TPTRELAIQVKEQIYML-TKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGRIKDL 133
Query: 624 IVXNHINLSDVQ 659
I +NLS V+
Sbjct: 134 IDRKALNLSKVE 145
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 85.0 bits (201), Expect = 1e-15
Identities = 43/140 (30%), Positives = 75/140 (53%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
FT L + + +GF++PSP+Q +PL G D++ +A++GTGKT F + +
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 411 LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHI 590
+ + ++ +++ PTRE+ Q+ D + + G GL V GG + + I I
Sbjct: 63 MKADGSVEGLVIVPTRELAMQVSDELFRFGK-LSGLKTATVYGGTAYGKQI-ERIKQASI 120
Query: 591 VVGSPGRLKHLIVXNHINLS 650
VV +PGRL+ L++ I L+
Sbjct: 121 VVATPGRLQDLLMSGKIKLN 140
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 85.0 bits (201), Expect = 1e-15
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
+E +F+ + LS + + G+++P+PIQ +PL G D+ +A +GTGKT F I
Sbjct: 1 MEIPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGI 60
Query: 396 IALEKLN-LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
A+E N +Q ++L P+RE+ Q+ + ++ H G+++ V GG + I
Sbjct: 61 PAIELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKAL 120
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
V I++G+PGR+ I + L V L
Sbjct: 121 SRGVQIIIGTPGRVIDHIKRKTLLLDAVSL 150
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 85.0 bits (201), Expect = 1e-15
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 1/134 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF +M L E L G+ + GF+KPS IQ + G D++ +++SGTGKT FSI L+
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
L++ Q +IL PTRE+ QI + +G + + +GG +V E I
Sbjct: 99 CLDIQVRETQALILAPTRELAVQIQKGLLALGD-YMNVQCHACIGGTNVGEDIRKLDYGQ 157
Query: 585 HIVVGSPGRLKHLI 626
H+V G+PGR+ +I
Sbjct: 158 HVVAGTPGRVFDMI 171
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 85.0 bits (201), Expect = 1e-15
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 80 DTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAM 139
Query: 357 AKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVE 527
A++G+GKT F + E+L ++ G + +IL+PTRE+ Q K++G GL
Sbjct: 140 ARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGK-FTGLKTA 198
Query: 528 XVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
++GG + + I++ +PGRL H+ V + L V+
Sbjct: 199 LILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVE 242
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 85.0 bits (201), Expect = 1e-15
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 3/147 (2%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F + LS+ L + GF++P+PIQ +PL G D++ A++G+GKT F + LE
Sbjct: 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162
Query: 408 KLNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
KL +++ G + +IL+P+RE+ Q V+K S L + ++GG S+ E
Sbjct: 163 KLKVHSAKVGARAVILSPSRELALQTLKVVKDF-SAGTDLRLAMLVGGDSLEEQFKMMMS 221
Query: 579 XVHIVVGSPGRLKHLIVXNHINLSDVQ 659
I++ +PGR HL V ++L+ V+
Sbjct: 222 NPDIIIATPGRFLHLKVEMELSLASVE 248
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 84.6 bits (200), Expect = 2e-15
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F ++ L L + G++ P+PIQ +P G DLL +A++GTGKT F++ +EK
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 411 LNLNNGL--QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
L N L +V+++TPTRE+ Q+ + K S + GG I V
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKV 172
Query: 585 HIVVGSPGRL 614
+VVG+PGR+
Sbjct: 173 DVVVGTPGRI 182
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 84.6 bits (200), Expect = 2e-15
Identities = 49/133 (36%), Positives = 75/133 (56%), Gaps = 2/133 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F S+ LSE + + S G+++ + IQ +P G DL+ +AK+GTGKT F + L K
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 411 LNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
L L++ +QV+IL PTRE+ Q+ I+ + + + + GG+ + H
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
Query: 588 IVVGSPGR-LKHL 623
IVVG+PGR LKHL
Sbjct: 126 IVVGTPGRILKHL 138
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 84.6 bits (200), Expect = 2e-15
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 1/146 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + LS L L S G++ PSPIQ + D++ +A++GTGKT F + L+K
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 411 LNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
+NLN N Q++IL PTRE+ Q+ + ++ G +V + GG S + + VH
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
Query: 588 IVVGSPGRLKHLIVXNHINLSDVQLF 665
+VG+PGR+ I + L +++ F
Sbjct: 134 AIVGTPGRVMDHIEKKTLKLDNLKSF 159
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 84.6 bits (200), Expect = 2e-15
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
Query: 411 LNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV- 584
+ NG + V+++ TRE+ QI ++ + + V GGLS+ +
Sbjct: 106 IEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP 165
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQLF 665
H+VVG+PGR+ L+ +L +V+ F
Sbjct: 166 HVVVGTPGRILALVRNRSFSLKNVKHF 192
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 84.2 bits (199), Expect = 3e-15
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF + L L L G++KPSPIQ +P G D+L A++G+GKT FS+ L+
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
L+ Q+++L PTRE+ Q+ + + H G+NV + GG + +
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 585 HIVVGSPGRLKHLIVXNHINLS 650
IVVG+PGRL + ++LS
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLS 148
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 83.8 bits (198), Expect = 3e-15
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F + L E L + GF +PSPIQ +P G D++ +A++GTGKT F + L+
Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65
Query: 408 KLNL-NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
+++ + +Q ++L PTRE+ Q+ + + + H G+ + V GG +
Sbjct: 66 RIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGA 125
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQL 662
+VVG+PGR + +HIN +QL
Sbjct: 126 QVVVGTPGR-----ILDHINRGTLQL 146
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 83.8 bits (198), Expect = 3e-15
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
+TF + L L + + KP+PIQ +P D+L A +GTGKT F + AL
Sbjct: 1 MTFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPAL 60
Query: 405 EKL----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
+ L + +V+IL PTRE+ QI V+KQ+G+ H V GG + ++ +
Sbjct: 61 QFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGA-HCPFESNVVTGGFASDKQLEIL 119
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+ I+V +PGRL +++ I+LSD++L
Sbjct: 120 QSKIDILVATPGRLLNIMSKEFIDLSDIEL 149
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 83.8 bits (198), Expect = 3e-15
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF L+E L L S G+ PS +Q +P G +L++ +K+G+GKT F+I E
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
+N++ N +Q +I+ PTRE+ Q+ D I IG + + G S+ + I V
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIG-RLKKVRCSAIFGKQSIKDQIAELKQRV 122
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQ 659
HIVV +PGR+ I I L +V+
Sbjct: 123 HIVVATPGRILDHINRGSIKLENVK 147
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 83.8 bits (198), Expect = 3e-15
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Frame = +3
Query: 165 SLPHDIRNSTRTRDVQIVENVT--FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCG 338
S P D N + T F SM L++ L ++ GF P+PIQ +P+ G
Sbjct: 208 SFPMDENNEQEEETTSKKKKKTGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDG 267
Query: 339 FDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIXXQICDVIKQIGSHH 509
D++ A++G+GKT F I ++KL ++ G++ +IL+PTRE+ Q V+K S
Sbjct: 268 HDIVGMARTGSGKTGAFVIPMIQKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDF-SQG 326
Query: 510 XGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
L ++GG S+ + I++ +PGRL H ++ ++LS VQ
Sbjct: 327 TQLRTILIVGGDSMEDQFTDLARNPDIIIATPGRLMHHLLETGMSLSKVQ 376
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 83.8 bits (198), Expect = 3e-15
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 411 L--NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV-NEXIXXXXXX 581
L + NN V+++ TRE+ QI ++ + + V GG+++ +
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGT 162
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQLF 665
HIVVG+PGR+ LI +NL ++ F
Sbjct: 163 PHIVVGTPGRILALIRNKKLNLKLLKHF 190
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 83.8 bits (198), Expect = 3e-15
Identities = 54/134 (40%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
Frame = +3
Query: 285 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL-----EKLNLNNGLQ----- 434
F+KPSPIQ H P G DL+ AK+G+GKT+ F I A+ + + G +
Sbjct: 134 FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPT 193
Query: 435 VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRL 614
++L+PTRE+ QI DV+++ G GL V GG S I V IV+G+PGRL
Sbjct: 194 CLVLSPTRELAVQISDVLREAG-EPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRL 252
Query: 615 KHLIVXNHINLSDV 656
+ LI N + LSDV
Sbjct: 253 RDLIESNVLRLSDV 266
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 83.8 bits (198), Expect = 3e-15
Identities = 53/150 (35%), Positives = 89/150 (59%), Gaps = 6/150 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
FT + L E T GL +S F+ + +Q +PL G D+L AK+G+GKT+ F + LEK
Sbjct: 55 FTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEK 114
Query: 411 L-----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
L +GL +I++PTRE+ QI +V+++IG +H + V+GG S+ E
Sbjct: 115 LYHAKWTEYDGLGALIISPTRELAVQIFEVLRKIGRNHF-FSAGLVIGGKSLKEE-AERL 172
Query: 576 XXVHIVVGSPGR-LKHLIVXNHINLSDVQL 662
++I+V +PGR L+HL + +++++Q+
Sbjct: 173 GRMNILVCTPGRMLQHLDQTANFDVNNLQI 202
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 83.8 bits (198), Expect = 3e-15
Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F SM L++ L + GF+ P+PIQ +PL G D++ A++G+GKT F I +E
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 411 LN---LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L N+ + +IL+P RE+ Q V+K S L ++GG+S+ E
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDF-SKGTDLRSVAIVGGVSLEEQFSLLSGK 189
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
IVV +PGR HL V + LS ++
Sbjct: 190 PDIVVATPGRFLHLKVEMKLELSSIE 215
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 83.4 bits (197), Expect = 4e-15
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 1/143 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + +SE L +G + +PIQ +P+ G D++ +AK+GTGKT+ F + LEK
Sbjct: 7 FLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEK 66
Query: 411 LNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
++ + +Q +I+ PTRE+ QI IK++ +NV + GG V + + H
Sbjct: 67 IDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTH 126
Query: 588 IVVGSPGRLKHLIVXNHINLSDV 656
IVV +PGRL I I+LS++
Sbjct: 127 IVVATPGRLLDHIRRETIDLSNL 149
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 83.4 bits (197), Expect = 4e-15
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
++F+S+ LS + G+ PSPIQ +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 405 EKLNLNN-----GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXX 569
E L+ N ++ ++LTPTRE+ Q+ + ++ G + L V GG+ +N I
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGK-YLPLRSAVVFGGVPINPQIQK 119
Query: 570 XXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
V ++V +PGRL L+ N + + +++
Sbjct: 120 LRHGVDVLVATPGRLLDLVQQNVVKFNQLEI 150
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 83.4 bits (197), Expect = 4e-15
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F S+ L +F L S G++ +PIQ +PL G D++ A++GTGKT F++ L
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 411 LNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
+++ Q ++L PTRE+ Q+ + + G GL + + GG + + + H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 588 IVVGSPGRLKHLIVXNHINLSDV 656
IVV +PGRL I I+L+ +
Sbjct: 131 IVVATPGRLLDHIERRSIDLTGI 153
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 83.4 bits (197), Expect = 4e-15
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLH--GVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
F M L L G+ S GF+ PS IQ G ++ +A+SGTGKT FSI L
Sbjct: 93 FDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSIGVL 152
Query: 405 EKLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLS-VNEXIXXXXX 578
K++++ Q ++L PTRE+ QI +V K+IGS GL++ +GG V +
Sbjct: 153 SKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRVVDAQARAAS 212
Query: 579 XVHIVVGSPGRLKHLIVXNHINLSDVQL 662
HI + +PGR LIV H+ + + ++
Sbjct: 213 HPHICICTPGRALDLIVSGHLRVQNFKM 240
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 83.4 bits (197), Expect = 4e-15
Identities = 56/146 (38%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGF-DLLLEAKSGTGKTVVFSIIAL 404
+F ++ LS+ L L GF P+PIQ +P+ G D++ +A++GTGKT F I L
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 405 EKLNLNN-GLQVMILTPTREIXXQICDVIKQI-GSHHXGLNVEXVMGGLSVNEXIXXXXX 578
E ++ ++ Q +IL PTRE+ Q+ + I I GS LNV V GG S++ I
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKR--LNVFPVYGGQSIDRQIRELRR 120
Query: 579 XVHIVVGSPGRLKHLIVXNHINLSDV 656
V IVVG+PGR+ I I L +V
Sbjct: 121 GVQIVVGTPGRILDHISRRTIKLENV 146
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 83.4 bits (197), Expect = 4e-15
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 411 LNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV- 584
L G + V+++ TRE+ QI ++ + + V GGLS+ +
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQLF 665
HIVVG+PGR+ L +NL ++ F
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHF 193
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 83.4 bits (197), Expect = 4e-15
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Frame = +3
Query: 246 LSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 425
L E L G+ S GF+ PS IQ + G D+ +A+SGTGKT F++ AL+ +++
Sbjct: 45 LKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQ 104
Query: 426 GL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGS 602
+ Q+++L TREI Q + +G G V + GG + HIVVG+
Sbjct: 105 DVTQILVLASTREIAAQNAARFEDLGC-FMGARVALLSGGSPIAADKVALEKKPHIVVGT 163
Query: 603 PGRLKHLIVXNHINLSDVQLF 665
PGR++H+I N +++ +++LF
Sbjct: 164 PGRVEHMININELSMDNIKLF 184
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 83.0 bits (196), Expect = 6e-15
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 6/138 (4%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F + LS TL GL G+ KP+ IQ + LG G D+L A++G+GKT+ F I LE
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILE 111
Query: 408 KLNLN-----NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
+L +GL +++TPTRE+ QI + ++++G HH + ++GG + +
Sbjct: 112 RLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHE-FSAGLIIGGKDL-KFERNR 169
Query: 573 XXXVHIVVGSPGR-LKHL 623
+IV+G+PGR L+H+
Sbjct: 170 MDQCNIVIGTPGRILQHM 187
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 82.6 bits (195), Expect = 8e-15
Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
+TF + L++ L L G++KPSPIQ +P G D+L A++GTGKT F+ L
Sbjct: 1 MTFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPIL 60
Query: 405 EKLN----LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
++L ++ +ILTPTRE+ QI + + G H L + GG+ +
Sbjct: 61 QRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGK-HLPLRSAVIFGGVGQQPQVDKL 119
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
V I+V +PGRL L ++LS +++F
Sbjct: 120 KKGVDILVATPGRLLDLQGQGFVDLSRLEIF 150
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 82.6 bits (195), Expect = 8e-15
Identities = 47/133 (35%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+ + +S TL GL + G+ + + IQ +P G D++ +A++G+GKT+ + I LE
Sbjct: 73 FSDLPISRRTLEGLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTLAYVIPILEN 132
Query: 411 LNLNN-----GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
+ +N GL +ILTPTRE+ Q+ DVIK+IG H L+ ++GG +
Sbjct: 133 IYRDNYCSIDGLLSLILTPTRELASQVFDVIKEIGKFHSTLSAGCIVGGKDIKSE-SSRI 191
Query: 576 XXVHIVVGSPGRL 614
++I+V +PGRL
Sbjct: 192 NMLNILVATPGRL 204
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 82.6 bits (195), Expect = 8e-15
Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Frame = +3
Query: 198 TRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 377
+ DV+ E + + S+ L L + G+ PSP+Q+ +P G +LL+ +K+GTGK
Sbjct: 99 SEDVRETEGIGWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGK 158
Query: 378 TVVFSIIALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN 554
T + + L +N + +Q +IL P RE+ QI +K++ S G+ V+GG S+
Sbjct: 159 TASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRM-SEGTGVISAPVVGGTSMQ 217
Query: 555 EXIXXXXXXVHIVVGSPGRLKHLI 626
+ I VH++VG+PGR+ L+
Sbjct: 218 DDIIRVSNGVHVMVGTPGRIVDLV 241
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/146 (28%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F SM L++ TL G++ G++ P+PIQ +P G D++ A++G+GKT + + + +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 411 LNLNN--GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
L ++ G++ +I+ PTRE+ Q V ++G L ++GG +++
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGK-LTNLKASLIIGGSKLSDQFDNLSSGP 133
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQL 662
I+V +PGRL ++ +I+L+ V++
Sbjct: 134 DIIVATPGRLTFILEGANISLNRVEM 159
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 82.2 bits (194), Expect = 1e-14
Identities = 48/142 (33%), Positives = 77/142 (54%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+++ LS + L F+KP+ IQ +P G DLL A +G+GKT+ + + LEK
Sbjct: 3 FSTLSLSSELIHAL-PKDFKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLLEK 61
Query: 411 LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHI 590
L +N + +IL P RE+ Q+ + I Q+G GLN + GG+ + + HI
Sbjct: 62 LGVNPEQKALILVPIRELATQVSEAINQVG-QALGLNAVCLCGGVDKEQQLQALATNPHI 120
Query: 591 VVGSPGRLKHLIVXNHINLSDV 656
+V + GRL L N ++LS++
Sbjct: 121 LVATTGRLVDL-ANNGLDLSNI 141
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 82.2 bits (194), Expect = 1e-14
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
FT + L L +G++ P+PIQL +P+ G DLL A++GTGKT FS+ L+
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 411 LNLN------NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
L+ + + +ILTPTRE+ QI + I+ S H + + GG+ N +
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAY-SKHLNMKHAVIFGGVGQNPQVRAL 124
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
V I++ +PGRL L H+ L V++F
Sbjct: 125 QGGVDILIATPGRLMDLHGQKHLKLDRVEIF 155
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/144 (29%), Positives = 77/144 (53%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F S L + GL G++ + +Q VP+ + G D++ +A++G+GKT F + LE+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 411 LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHI 590
+ LQ ++L PTRE+ Q+ + + + GL++ V GG + + V I
Sbjct: 67 CQPSGKLQALVLAPTRELANQVAQEFELL-QGNAGLSIVTVYGGTDLEKQAKTLAKGVDI 125
Query: 591 VVGSPGRLKHLIVXNHINLSDVQL 662
+VG+PGR+ + HI+L+ ++
Sbjct: 126 IVGTPGRVMDMNERGHIDLNSPKM 149
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 81.8 bits (193), Expect = 1e-14
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F S + L + G+Q +P+Q +P + G D+L A++GTGKT F++ L+K
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 411 LN------LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
++ ++ + +ILTPTRE+ Q+ D I S H ++V + GG+ +
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAY-SKHMNISVLTIYGGMKMATQAQKL 121
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
I+V +PGRL IV +++LS+V+
Sbjct: 122 KQGADIIVATPGRLLEHIVACNLSLSNVE 150
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 81.8 bits (193), Expect = 1e-14
Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Frame = +3
Query: 282 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN--GLQVMILTPT 455
GF +P+PIQ +P G D++ +++G+GKT F I L+KL + G++ ++++PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 456 REIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXN 635
RE+ Q V+K++G GL ++GG + E I++ +PGRL H+IV
Sbjct: 103 RELALQTFKVVKELG-RFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEM 161
Query: 636 HINLSDVQ 659
+ LS VQ
Sbjct: 162 DLRLSYVQ 169
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 81.8 bits (193), Expect = 1e-14
Identities = 51/162 (31%), Positives = 90/162 (55%), Gaps = 6/162 (3%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
R +++ E F+ +S+ TL GL+ +GF P+ IQ G+P+ G D+L AK+G+G
Sbjct: 40 RCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSG 99
Query: 375 KTVVFSIIALE-----KLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMG 539
KT+ F I +E K +GL ++++PTRE+ Q +V+ +IG+ H L+ ++G
Sbjct: 100 KTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKH-DLSAGLIIG 158
Query: 540 GLSVNEXIXXXXXXVHIVVGSPGR-LKHLIVXNHINLSDVQL 662
G + +IVV +PGR L+H+ + + + +Q+
Sbjct: 159 GKDLKNE-QKRIMKTNIVVCTPGRLLQHMDETPNFDCTSLQI 199
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 81.8 bits (193), Expect = 1e-14
Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Frame = +3
Query: 213 IVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS 392
+ + +TF + L EF L + GF+ PSPIQ +P G D+L A++G+GKT F+
Sbjct: 1 MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFA 60
Query: 393 IIALEKLN-LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXX 569
+ L +++ Q++++ PTRE+ Q+ D + + G + + GG + +
Sbjct: 61 LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRA 120
Query: 570 XXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
+VVG+PGR+ I +NLS+++
Sbjct: 121 LKQGAQVVVGTPGRILDHIRRGTLNLSELR 150
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 54.0 bits (124), Expect(2) = 1e-14
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF S+ LS + L ++G+ KP+P+Q +P G G DLL+ + +G+GKT F + A+E
Sbjct: 44 TFASLGLSPEIVSALQAAGYVKPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFMLPAIE 103
Query: 408 K 410
+
Sbjct: 104 R 104
Score = 48.0 bits (109), Expect(2) = 1e-14
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = +3
Query: 435 VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRL 614
+++LTPTRE+ Q+ G H L ++GG++ + + I+V +PGRL
Sbjct: 140 LLVLTPTRELAMQVTTAASTYGKHLRRLRTVSILGGVAYGQQLMLLAKNPEILVATPGRL 199
Query: 615 KHLIVXNHINLSDVQL 662
+ I+LS++++
Sbjct: 200 LDHLERGRIDLSELKM 215
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 81.4 bits (192), Expect = 2e-14
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 401
TF + +S + G++ P P+Q +P LG+ D++ A++GTGKT F +
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENN-DVVALAQTGTGKTAAFGLPL 61
Query: 402 LEKLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
L+++++ N + Q +IL PTRE+ QI + + GL V V GG S++ I
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKR 121
Query: 579 XVHIVVGSPGRLKHLIVXNHINLSDV 656
VHI+V +PGRL L+ ++LS V
Sbjct: 122 GVHIIVATPGRLLDLMERKTVSLSTV 147
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/111 (34%), Positives = 65/111 (58%)
Frame = +3
Query: 282 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 461
GF+ P+PIQ +PL G +L+ +A +GTGKT + + L+++ QV+I+TPTRE
Sbjct: 21 GFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGKKAQVLIVTPTRE 80
Query: 462 IXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRL 614
+ Q+ D + ++G + + V GG ++ I V ++VG+PGR+
Sbjct: 81 LALQVADEVAKLGK-YLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRI 130
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 81.4 bits (192), Expect = 2e-14
Identities = 44/145 (30%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
T+ SM L + + +G++KPSPIQ + + G +++ ++++G+GKT FSI L
Sbjct: 21 TWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSIGTLA 80
Query: 408 KLNL-NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
+L L + +++I++PTRE+ Q + +K +G+ N +GG S+ + +
Sbjct: 81 RLRLTSKTTELIIVSPTRELAIQTENTLKSLGA-----NTRACVGGNSLGADVKALQKGI 135
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQ 659
H V G+PGR+ L+ ++I VQ
Sbjct: 136 HCVSGTPGRILQLLKEHNIQAEKVQ 160
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 81.4 bits (192), Expect = 2e-14
Identities = 44/149 (29%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
+E + F + +S + GF++ SPIQ +P D+ +A++GTGKT F I
Sbjct: 1 MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGI 60
Query: 396 IALEKLNL-NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
LE ++ +N LQ +IL PTRE+ Q+ + ++++ + ++V V GG ++ I
Sbjct: 61 PLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKAL 120
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
V I++G+PGR+ I ++L++++
Sbjct: 121 QKGVQIIIGTPGRVMDHIDRGTLSLNNIK 149
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F LL L ++ SGF+ PS +Q +P G D++ +AKSG GKT VF + L++
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 411 LNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN-EXIXXXXXXV 584
+ + G + ++L TRE+ QIC+ + ++ V GG+++
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECP 167
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQLF 665
HIVVG+PGR+ L ++L +V+ F
Sbjct: 168 HIVVGTPGRVLALAREKDLSLKNVRHF 194
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 81.4 bits (192), Expect = 2e-14
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F +M L+ L + GF+ P+PIQ VPL G D++ A++G+GKT F I +E+
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 411 LNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L ++ G + +I++P+RE+ Q V+K+ G L ++GG S+ E
Sbjct: 140 LKTHSAKVGARGVIMSPSRELALQTLKVVKEFG-RGTDLRTILLVGGDSLEEQFNSMTTN 198
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
I++ +PGR HL V ++LS VQ
Sbjct: 199 PDIIIATPGRFLHLKVEMGLDLSSVQ 224
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 81.0 bits (191), Expect = 2e-14
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 6/150 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+ + LS+ L L G+ P+PIQ +P G DLL A++GTGKT F + ++++
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 411 L-NLNNGL-----QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
L +N + ++++L PTRE+ QI K G+ GL V+ ++GG SVN+
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGA-LAGLKVQSIVGGTSVNKDRNKL 122
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
I++ +PGRL LI NL V++
Sbjct: 123 HRGTDILIATPGRLLDLIDQKAFNLGSVEV 152
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 81.0 bits (191), Expect = 2e-14
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
R+ DV + TF + L L GL + F P+ IQ +P+ DL++++KSGTG
Sbjct: 15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTG 74
Query: 375 KTVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV 551
KT+++ I ++ N N N MI+ PTRE+ Q+ D + +GG V
Sbjct: 75 KTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDV 134
Query: 552 NEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+ +++G+PGRL HL ++S ++L
Sbjct: 135 AKD-RKRMNESRVIIGTPGRLLHLYENRVFDVSKLRL 170
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 81.0 bits (191), Expect = 2e-14
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF + LS L + G++KP+PIQ +PL G DL A +G+GKT F++ LE
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 408 KLNLNN----GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
+L +V+ILTPTRE+ QI +I+ + + + ++GGLSV E
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNL-AQFTDIKCGLIVGGLSVREQEVVLR 286
Query: 576 XXVHIVVGSPGR-LKHLIVXNHINLSDV 656
IVV +PGR + HL ++L D+
Sbjct: 287 SMPDIVVATPGRMIDHLRNSMSVDLDDL 314
>UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1;
Ureaplasma parvum|Rep: ATP-dependent RNA helicase -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 443
Score = 80.6 bits (190), Expect = 3e-14
Identities = 45/135 (33%), Positives = 76/135 (56%)
Frame = +3
Query: 252 EFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL 431
++ L LI+ +P+PIQL +PL +++ A +GTGKT+ F + L L+L+ L
Sbjct: 9 KWILDSLINQKIFEPTPIQLKTMPLIAKRENIIGVAPTGTGKTLAFVLPILNNLDLSQKL 68
Query: 432 QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGR 611
QV+I+TPTRE+ QI I H L V+ ++GG S+++ I +++ +P R
Sbjct: 69 QVIIITPTRELARQIFSKIIVFKKHQPLLQVKMLIGGESIDQQINSQLNKSQLLIATPTR 128
Query: 612 LKHLIVXNHINLSDV 656
LK ++ ++L V
Sbjct: 129 LKQILTRQILDLHHV 143
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/150 (27%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
++ + F+ + LS ++ GF++ SPIQ +P+ G D++ A++GTGKT F+I
Sbjct: 6 MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAI 65
Query: 396 IALEKLNL-NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
+E L + + LQ +IL PTRE+ Q+ + +++ + V + GG + +
Sbjct: 66 PTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRAL 125
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
IV+ +PGR+ + I+L ++++
Sbjct: 126 RKNPQIVIATPGRMMDHMRRGSIHLDEIKI 155
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 80.6 bits (190), Expect = 3e-14
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
V + TF + L L L + G++ PS IQ +P G D+L +A++GTGKT F++
Sbjct: 6 VASPTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFAL 65
Query: 396 IALEKLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
L +L+L QV++L PTRE+ Q+ Q G GL V + GG E +
Sbjct: 66 PLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGL 125
Query: 573 XXXVHIVVGSPGR-LKHL 623
++VG+PGR + HL
Sbjct: 126 RRGAQVIVGTPGRVIDHL 143
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 80.6 bits (190), Expect = 3e-14
Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Frame = +3
Query: 204 DVQIVENVT-FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 380
D+ E+V F + L L L + G+++P+PIQ VP G DLL +A +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 381 VVFSIIALEKL----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLS 548
F++ L +L ++G Q ++L PTRE+ Q+ + I + G G V V GG
Sbjct: 109 AAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYG-RDLGARVLPVYGGAP 167
Query: 549 VNEXIXXXXXXVHIVVGSPGR-LKHL 623
+ + V +VV +PGR L H+
Sbjct: 168 IGRQVRALVQGVDVVVATPGRALDHM 193
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 80.6 bits (190), Expect = 3e-14
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Frame = +3
Query: 270 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMIL 446
L S G + SPIQ +P G D++ +A++G+GKT+ F I ALEK+ +N+ Q ++L
Sbjct: 19 LDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIML 78
Query: 447 TPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLI 626
PTRE+ Q+ + + V + GG + I HI+VG+PGR+ +
Sbjct: 79 CPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKHSPHIIVGTPGRVMDHV 138
Query: 627 VXNHINLSDVQL 662
I+L +V+L
Sbjct: 139 EKRRIDLRNVKL 150
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 80.6 bits (190), Expect = 3e-14
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F SM L + G+ G++ P+PIQ +PL G D++ AK+G+GKT F I EK
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 411 LNL---NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L G + +IL+PTRE+ Q IK++G L V+GG S++
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELG-RFMELKSILVLGGDSMDSQFSAIHTC 159
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
++V +PGR HL V + L+ ++
Sbjct: 160 PDVIVATPGRFLHLCVEMDLKLNSIE 185
>UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase mak5 - Schizosaccharomyces pombe (Fission
yeast)
Length = 648
Score = 80.6 bits (190), Expect = 3e-14
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Frame = +3
Query: 246 LSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN- 422
LS L L +GF KP PIQ +P GFD++ +A +G+GKT+ F I LE N
Sbjct: 129 LSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNV 188
Query: 423 --NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVV 596
+Q +++ PTRE+ QIC + I + V + GGL+V + H+VV
Sbjct: 189 DAKYVQALVVAPTRELAHQICQHFELI-KPSPNIRVMSITGGLAVQKQQRLLNKHPHVVV 247
Query: 597 GSPGRLKHLIVXNHI 641
+PGRL +I N++
Sbjct: 248 ATPGRLWSVINENNL 262
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 80.2 bits (189), Expect = 4e-14
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
+V+F ++ L + L G+ KP+PIQ +P G DL A++GTGKT F++ +
Sbjct: 5 SVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPS 64
Query: 402 LEKLNLN------NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXI 563
+ L N G +++IL+PTRE+ QI + H ++V V GG+ + +
Sbjct: 65 IHYLATNPQARPQRGCRMLILSPTRELASQIARACNDY-TRHLRMSVNAVFGGVPIGRQM 123
Query: 564 XXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
I+V +PGRL LI + L DV++F
Sbjct: 124 RMLDRGTDILVATPGRLLDLIDQRALVLKDVEVF 157
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 80.2 bits (189), Expect = 4e-14
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Frame = +3
Query: 204 DVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 383
D + + VTF S+ L E L + GF+ P+PIQ +P D++ A++GTGKT
Sbjct: 38 DEEDTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTA 97
Query: 384 VFSIIALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEX 560
F + L ++ + +Q ++L PTRE+ Q I+ + L+V V GG
Sbjct: 98 AFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQ 157
Query: 561 IXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
I +VVG+PGR+ LI ++LS V++
Sbjct: 158 IGALKRGAQVVVGTPGRVIDLIEKGALDLSHVRM 191
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 79.8 bits (188), Expect = 5e-14
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Frame = +3
Query: 204 DVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 383
D E F ++ + L + + G+++PSPIQ +P+ G D++ +A++GTGKT
Sbjct: 16 DPMTQETGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTA 75
Query: 384 VFSIIALEKLN-LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEX 560
F++ L +++ Q++IL PTRE+ Q+ + S G+ V V GG +
Sbjct: 76 AFALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQ 135
Query: 561 IXXXXXXVHIVVGSPGRL 614
+ I+V +PGRL
Sbjct: 136 LKALRQGAQILVATPGRL 153
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 79.8 bits (188), Expect = 5e-14
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 5/166 (3%)
Frame = +3
Query: 180 IRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEA 359
++++ + + + E TF + LS L + GF +P+PIQ +PL G D+L A
Sbjct: 175 LQSNRKLKKIVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASA 234
Query: 360 KSGTGKTVVFSIIALEKLNLNN----GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVE 527
+G+GKT F + LE+L + ++V+IL PTRE+ Q C + + + +
Sbjct: 235 STGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQ-CQSVMENLAQFSNITSC 293
Query: 528 XVMGGLSVNEXIXXXXXXVHIVVGSPGRL-KHLIVXNHINLSDVQL 662
++GGLS +V+ +PGRL HL+ + I L D+++
Sbjct: 294 LIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEI 339
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 79.8 bits (188), Expect = 5e-14
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F SM L E G+ G++ P+PIQ +PL G D+ A++G+GKT F + +++
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 411 LNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L ++ G++ +IL+PTR++ Q +Q+G L + ++GG S+
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGK-FTDLKISLIVGGDSMESQFEELAEN 169
Query: 582 VHIVVGSPGRL-KHLIVXNHINLSDVQ 659
I++ +PGRL HL +NL V+
Sbjct: 170 PDIIIATPGRLVHHLAEVEDLNLRTVE 196
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 79.8 bits (188), Expect = 5e-14
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Frame = +3
Query: 210 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 389
Q EN++F M LS L + + GF++P+PIQ +P+G G D+ A +GTGKT F
Sbjct: 213 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAF 272
Query: 390 SIIALEKLNLNNG----LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNE 557
++ LE+L +V++L PTRE+ Q+ V +Q+ + + +GGL V
Sbjct: 273 ALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQL-AQFCNITTCLAVGGLDVKS 331
Query: 558 XIXXXXXXVHIVVGSPGRL-KHLIVXNHINLSDVQL 662
I++ +PGRL HL +LS +++
Sbjct: 332 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEV 367
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 79.4 bits (187), Expect = 7e-14
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
+VTF + LS L + G+ P+PIQ +P G D++ A++GTGKT F++
Sbjct: 4 DVTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPL 63
Query: 402 LEKLN---------LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN 554
L +L + ++ +I+ PTRE+ QI + +++ G + L V GG+++
Sbjct: 64 LYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGK-YLALRTAVVFGGINIE 122
Query: 555 EXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
I V I+V +PGRL L+ +N S ++
Sbjct: 123 PQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEI 158
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 79.4 bits (187), Expect = 7e-14
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = +3
Query: 276 SSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTP 452
+SGFQKP+P+Q L G D++ E+ +GTGKT+ +++ LE++ Q +IL P
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAP 80
Query: 453 TREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVX 632
+RE+ QI VI Q L ++GG +V + + HI+VG+PGR+ LI
Sbjct: 81 SRELVMQIFQVI-QDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKA 139
Query: 633 NHINLSDVQ 659
+ + +V+
Sbjct: 140 KKLKMHEVK 148
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 79.4 bits (187), Expect = 7e-14
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
++F+S+ LS + G+ PSPIQ +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 405 EKLNLNN-----GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXX 569
E L+ N ++ ++LTPTRE+ Q+ + ++ G + L V GG+ +N I
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGK-YLPLRSAVVFGGVPINPQIQK 119
Query: 570 XXXXVHIVVGSPGRLKHL 623
V ++V +PGRL L
Sbjct: 120 LRHGVDVLVATPGRLLDL 137
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 79.4 bits (187), Expect = 7e-14
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 6/150 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 407
FT + LS+ T GL +G+ + IQ + L G D+L A++G+GKT+ F I LE
Sbjct: 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEI 119
Query: 408 ----KLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
K ++GL ++++PTRE+ QI +V+++IGS+H + V+GG V +
Sbjct: 120 LYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHT-FSAGLVIGGKDVKQE-KDRL 177
Query: 576 XXVHIVVGSPGR-LKHLIVXNHINLSDVQL 662
++I++ +PGR L+H+ + S+VQ+
Sbjct: 178 SRINILIATPGRLLQHMDQTLGFDTSNVQV 207
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 79.4 bits (187), Expect = 7e-14
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F +M L+ L + GF P+PIQ +PL D++ A++G+GKT F I +E+
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 411 LNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L ++ G + +I++P+RE+ Q V+K++G L ++GG S+ E
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGK-GTDLKTVLLVGGDSLEEQFGLMAAN 206
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
I++ +PGR HL V +NLS V+
Sbjct: 207 PDIIIATPGRFLHLKVEMSLNLSSVR 232
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 79.0 bits (186), Expect = 1e-13
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 407
F S L+ L +GF +P+ IQ +P G D+L A++GTGKT F I L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 408 ----KLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
K + + + +++ PTRE+ QI +V K+IG+ + L + GG+ I
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGA-YTRLRTVCITGGVEQEAQIAAAD 121
Query: 576 XXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+ I+V +PGR+ LI HI ++ V++
Sbjct: 122 YGIDILVATPGRMFDLIYQKHIKITRVKI 150
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 79.0 bits (186), Expect = 1e-13
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+ + LS L + F +P+PIQ + G D++ A++GTGKT+ F + ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 411 LNL---NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L+ G++ +ILTPTRE+ QI + + QI + G+ +GGL+ +
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQI-ARGTGIRAAVAVGGLNERSQLRDIRGG 122
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQL 662
+IVV +PGRL + INL+ V++
Sbjct: 123 ANIVVATPGRLYDFMSRGLINLTTVRM 149
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 79.0 bits (186), Expect = 1e-13
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
++F S+ LS L + G+++P+PIQ +P G DL+ A++GTGKT F++ L
Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
Query: 405 EKL-------NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXI 563
+ L ++ +ILTPTRE+ QI + ++ S + + V GG+S+N +
Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDY-SKYLNIRSLVVFGGVSINPQM 119
Query: 564 XXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
V ++V +PGRL L N + L V++
Sbjct: 120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEI 152
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 78.6 bits (185), Expect = 1e-13
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF + L E + L +G P PIQ +P G D+L ++G+GKT+ F + L
Sbjct: 62 TFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLA 121
Query: 408 KL----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
L + + +ILTPTRE+ Q+ D ++ G GL ++ V GG S+ I
Sbjct: 122 TLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGD-VLGLKMKVVCGGTSMGNQIYALE 180
Query: 576 XXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
V ++V +PGRL+ +I +L +VQ+
Sbjct: 181 RGVDVLVATPGRLRDIINRGACSLENVQI 209
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F S+ L + G++ P+PIQ +PL G D++ A++G+GKT F I LEK
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 411 LNLN---NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L + G++ +IL+PTR++ Q K++G L V ++GG S+ +
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGK-FTDLRVSLLVGGDSMEDQFEELTKG 148
Query: 582 VHIVVGSPGRLKHLI 626
+++ +PGRL HL+
Sbjct: 149 PDVIIATPGRLMHLL 163
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF + + L + G++ P+ IQ +P G D++ A++GTGKT F+I L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 408 KLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
K+++ + + Q ++L PTRE+ Q+ + + G++ LNV + GG S +
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 585 HIVVGSPGRLKHLIVXNHINLSDV 656
+VVG+PGR+ + ++LS V
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRV 157
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGF-DLLLEAKSGTGKTVVFSIIALE 407
F S LS + + GF P+PIQ +P+ G D + A +GTGKT F I +E
Sbjct: 46 FESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIE 105
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
++ Q ++L+PTRE+ Q+ + + +G G+ V + GG S I
Sbjct: 106 NIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKK-GVRVVTIYGGASYRTQIDGIKRGA 164
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQ 659
HIVV +PGRL + I L V+
Sbjct: 165 HIVVATPGRLVDFLEQKMIKLQSVK 189
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 285 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTRE 461
F+K P+Q +PL + D+L+EA +GTGKT+ + I ALE ++ N +QV+I PTRE
Sbjct: 17 FEKMMPVQEQAIPLLRERKDVLVEAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRE 76
Query: 462 IXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHI 641
+ QI VI Q+ S G+ +GG+ + I+VG+PGRL LI +
Sbjct: 77 LVMQIHQVI-QLFSQGSGIKSGAFIGGVELKRQHERLKKKPQIIVGTPGRLVELIDSKKM 135
Query: 642 NLSDVQL 662
+ V+L
Sbjct: 136 KMHKVKL 142
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/148 (27%), Positives = 75/148 (50%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
+ +F + LS L L +GF+ P+PIQ +P G D++ A +GTGKT F +
Sbjct: 1 MSTTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLL 60
Query: 396 IALEKLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
+++L G + ++L PTRE+ QI + +++ G H + ++GG+ + +
Sbjct: 61 PLIDRLAGKPGTRALVLAPTRELALQIGEELERFG-HARRVRGAVIIGGVGMAQQAEALR 119
Query: 576 XXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
IV+ +PGRL + + L ++
Sbjct: 120 QKREIVIATPGRLVDHLEQGNARLDGIE 147
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 78.2 bits (184), Expect = 2e-13
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
+++F + LS L + G+ +PS IQ +P G D++ A++GTGKT F++
Sbjct: 4 SMSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPL 63
Query: 402 LEKLN-----LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIX 566
LE L+ +N ++ ++LTPTRE+ Q+ + +K G H L V GG+ +N +
Sbjct: 64 LEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYG-QHLSLKSTVVFGGVKINPQMM 122
Query: 567 XXXXXVHIVVGSPGRLKHL 623
I++ +PGR+ L
Sbjct: 123 ALRRGADILIATPGRMMDL 141
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 78.2 bits (184), Expect = 2e-13
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Frame = +3
Query: 282 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL--------EKLNLNNGLQV 437
GF++PSPIQ + P G D + A +G+GKT+ F + AL EK +V
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRV 170
Query: 438 MILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLK 617
++L+PTRE+ QI DV+ + G+ G++ + GG S I V IV+G+PGR+K
Sbjct: 171 LVLSPTRELAQQIADVLCEAGA-PCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMK 229
Query: 618 HLIVXNHINLSDV 656
LI L+DV
Sbjct: 230 DLIEMGICRLNDV 242
Score = 37.9 bits (84), Expect = 0.22
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +3
Query: 459 EIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNH 638
++ I DV+ + G+ G++ + GG S I V IV+G+PGR+K LI
Sbjct: 241 DVSFVIADVLCEAGAP-CGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGI 299
Query: 639 INLSDV 656
L+DV
Sbjct: 300 CRLNDV 305
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 78.2 bits (184), Expect = 2e-13
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IA 401
+ F L E L SG++ P+PIQ+ +P+G G D+L A +G+GKT F + +
Sbjct: 203 IDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI 262
Query: 402 LEKLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
+ L + +ILTPTRE+ QI K++ S + ++GGL + +
Sbjct: 263 MRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQH 322
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQL 662
V +++ +PGRL +I + + L V++
Sbjct: 323 VKVIIATPGRLLDIIKQSSVELCGVKI 349
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 77.8 bits (183), Expect = 2e-13
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
++F + L L + +G+ +P+PIQ +P +L A++GTGKT F + L
Sbjct: 1 MSFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL 60
Query: 405 EKLNLN----NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
+KL N G +V+I++PTRE+ QI D IK+ S + +N + GG+S
Sbjct: 61 DKLTKNRSEGRGPRVLIVSPTRELATQITDSIKKY-SRYLRINSITITGGISYGLQNRMF 119
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+ I+V +PGRL L IN +++
Sbjct: 120 SKPIDILVATPGRLLDLYQQKKINFKGLEV 149
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 77.8 bits (183), Expect = 2e-13
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
+TF + LS+ L L + F + + IQ +PL G ++ ++ +GTGKT F + L
Sbjct: 1 MTFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPIL 60
Query: 405 EKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
EK+ N +Q +I+ PTRE+ QI + I+ GS L + ++GG + + I
Sbjct: 61 EKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS 120
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
IVVG+PGR+ + + L DV+
Sbjct: 121 -QIVVGTPGRVNDHLNRKTLKLDDVR 145
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/146 (28%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+ + L++ + +I G++ P+PIQ + +P G D+L +A++GTGKT F++ +
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 411 LNL---NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
++L + QV++L PTRE+ Q+ + + + L+V + GG I
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
V +VVG+ GR+ I + L +++
Sbjct: 129 VKVVVGTTGRVMDHIEKGTLQLDNLR 154
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
V +F + LSE + G+++P+P+Q+ + G D+++ +K+GTGKT F+I
Sbjct: 17 VSQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAI 76
Query: 396 IALEKL-NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
LE++ + +++ PTRE+ Q+ + H L+V V GG S+ E +
Sbjct: 77 PILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHR-DLSVVAVYGGASMGEQLQKL 135
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
I+VG+PGR+ I + L + +
Sbjct: 136 EAGAEIIVGTPGRIYDHIRRRTLKLDETMV 165
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 77.8 bits (183), Expect = 2e-13
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Frame = +3
Query: 240 MLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL 419
M LSE L + + P+PIQ +P G DL+ A++GTGKT F++ L +L+L
Sbjct: 1 MQLSEAIQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDL 60
Query: 420 NNGL------QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
+ QV++L+PTRE+ QI G + + + GG+ N +
Sbjct: 61 DRSRADACAPQVLVLSPTRELAVQIAQSFNVYG-RNVKFRLTTIFGGVGQNPQVRALKRG 119
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQLF 665
VH+ + +PGRL L+ +++LS + F
Sbjct: 120 VHVAIATPGRLLDLMDQGYVDLSQAKTF 147
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Frame = +3
Query: 282 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK-LNLNNGLQVMILTPTR 458
G+++P+ IQ+ +P+ G D++ A++G+GKT F+I L+K L L +IL PTR
Sbjct: 60 GWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTR 119
Query: 459 EIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRL 614
E+ QI + + +GS GL+V ++GGL + HI+VGSPGR+
Sbjct: 120 ELSLQIKEQLISLGS-EIGLDVCLILGGLDMVSQALQLSKKPHIIVGSPGRI 170
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 77.8 bits (183), Expect = 2e-13
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Frame = +3
Query: 183 RNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAK 362
R S + + + F +M L+ L + GF P+PIQ +P+ D++ A+
Sbjct: 77 RKSANLKGRTVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMAR 136
Query: 363 SGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXV 533
+G+GKT F I +EKL ++ G + +IL+P+RE+ Q V+K++G L +
Sbjct: 137 TGSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTLKVVKELGK-GTDLKSVLL 195
Query: 534 MGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
+GG S+ E IV+ +PGR HL V +++LS ++
Sbjct: 196 VGGDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSSIK 237
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 77.4 bits (182), Expect = 3e-13
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
NVTF L + + G+ +P+PIQ +P+ G D++ A++GTGKT FS+
Sbjct: 19 NVTFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPI 78
Query: 402 LEKL---------NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN 554
L +L + ++ +ILTPTRE+ Q+ + + L V GG+ +N
Sbjct: 79 LNRLMPLATENTSPARHPVRALILTPTRELADQVAANVHTY-AKFTPLRSTVVYGGVDIN 137
Query: 555 EXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
I V +V+ +PGRL + INL VQ+
Sbjct: 138 PQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQV 173
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 77.4 bits (182), Expect = 3e-13
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Frame = +3
Query: 219 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 398
E++TF + L+ L L S G++ P+PIQ + G D+L A++GTGKT FS+
Sbjct: 3 ESLTFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLP 62
Query: 399 ALEKLN-LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
L +++ N Q ++L PTRE+ Q+ + + +V + GG + +
Sbjct: 63 LLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALK 122
Query: 576 XXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
++VG+PGR+ + ++LSD++
Sbjct: 123 QNPQVIVGTPGRVMDHLRRGTLDLSDLK 150
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
+ ++F + L L + + G++ PSPIQ +P G LL A++GTGKT F++
Sbjct: 21 MSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFAL 80
Query: 396 IALEKLNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
L +++ N Q+++L PTRE+ Q+ + S +V + GG + I
Sbjct: 81 PLLSRIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGL 140
Query: 573 XXXVHIVVGSPGR-LKHL 623
++VG+PGR L HL
Sbjct: 141 KRGAQVIVGTPGRMLDHL 158
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 77.4 bits (182), Expect = 3e-13
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Frame = +3
Query: 153 IAVMSLPHDIRNSTRTRDVQIV--ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPL 326
I + L H++ + T V E TF + + T+ L ++G + IQ + +P+
Sbjct: 84 IEMSELTHNLMDGTELAATAPVSPEAPTFAELGARQETVDALAAAGITRAFAIQEYALPI 143
Query: 327 GKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGL-QVMILTPTREIXXQICDVIK 491
G DL+ +A +GTGKT+ F + LE++ +G Q +++ PTRE+ Q+ ++
Sbjct: 144 ALRGVDLIGQAPTGTGKTLGFGVPLLEQVLAPAEGGDGTPQALVVVPTRELGIQVAKDLQ 203
Query: 492 QIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
GS G+ V + GG++ I V I+VG+PGRL L H+ L V+
Sbjct: 204 AAGSTR-GVRVLPIYGGVAYEPQIEALRSGVEILVGTPGRLLDLAKQKHLKLDRVR 258
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 77.4 bits (182), Expect = 3e-13
Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
Frame = +3
Query: 219 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 398
EN+ F + L L GL G++ PS IQ +PL D+L +K+GTGKT+ F I
Sbjct: 13 ENLKFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIP 72
Query: 399 ALEKL-NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
L+ + + + G++ +IL PTRE+ QI +++++ + +N++ V G V+ I
Sbjct: 73 ILQNIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQ-VTG---VDSKIDKNN 128
Query: 576 XXVHIVVGSPGRLKHLIVXNHIN 644
+I++G+PG++ + N +N
Sbjct: 129 IDFNILLGTPGKIYDCLCKNEVN 151
>UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 900
Score = 77.4 bits (182), Expect = 3e-13
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
DI S E FT + +S+ T GL + +P+Q + L G D+L
Sbjct: 53 DIAESNEANTSTEHEYSKFTELPISQRTQMGLERGHYTILTPVQKGTLHLALAGLDVLGA 112
Query: 357 AKSGTGKTVVFSIIALEKL-----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLN 521
AK+G+GKT+ F I LE+L + + G+ ++L+PTRE+ QI V++ +G H L+
Sbjct: 113 AKTGSGKTLCFVIPVLERLYRERWSSDMGVGALLLSPTRELALQIFKVMQLVGYKHV-LS 171
Query: 522 VEXVMGGLSVNEXIXXXXXXVHIVVGSPGR-LKHLIVXNHINLSDVQLF 665
+ GG V E + I+VG+PGR L HL + L ++QLF
Sbjct: 172 AALLTGGRDVQEE-RKRLHAISIIVGTPGRVLHHLQDDAELVLDNLQLF 219
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 77.4 bits (182), Expect = 3e-13
Identities = 45/144 (31%), Positives = 77/144 (53%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+ M LS+ L + + GF+KPS IQ +P G ++++++KSGTGKT+ ++ L
Sbjct: 53 FSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTIAYTCGVLGN 112
Query: 411 LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHI 590
+ QVM++TPTRE+ Q+ +VI + G+ V + + + I +
Sbjct: 113 TKIGERTQVMVVTPTRELSTQVTEVISGLAG-PLGIKVFSALKN-KITDSIGE-----EV 165
Query: 591 VVGSPGRLKHLIVXNHINLSDVQL 662
VVGSPG + L+ +N V++
Sbjct: 166 VVGSPGTILKLMELGKLNYKGVKM 189
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 77.4 bits (182), Expect = 3e-13
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+FT+M LS L L S F P+PIQ +PL G D+L A +G+GKT F + LE
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282
Query: 408 KLNLNN------GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVE--XVMGGLSVNEXI 563
+L + +V++L PTRE+ Q C+ + + + GL+V ++GGLS+N
Sbjct: 283 RLCYRDRGKGGAACRVLVLCPTRELAVQ-CEAVGKALAEKGGLDVRFALLVGGLSLNAQA 341
Query: 564 XXXXXXVHIVVGSPGRL-KHLIVXNHINLS 650
I++ +PGRL HL LS
Sbjct: 342 HTLRTLPDILIATPGRLIDHLTNTPSFTLS 371
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 77.0 bits (181), Expect = 4e-13
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIA 401
+TF+ + L+ L L + PS IQ +P + +++ A++GTGKT F +
Sbjct: 1 MTFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPV 60
Query: 402 LEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
L+++N + QV++L PTRE+ Q+ + + ++ E V GG + E I
Sbjct: 61 LQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLET 120
Query: 579 XVHIVVGSPGRLKHLIVXNHINLSDVQ 659
HI+V +PGRL LI +NLS+++
Sbjct: 121 PKHILVATPGRLLDLIARKAVNLSNLK 147
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 77.0 bits (181), Expect = 4e-13
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
NV+F M LS L +G+ P+PIQ +P+ G D+ A +GTGKT F +
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 402 LEKLNLN----NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXX 569
LE++ + +V++L PTRE+ Q+ V +++ S L V GGL +
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKL-STFIQLEVCLCAGGLDLKAQEAA 265
Query: 570 XXXXVHIVVGSPGRL-KHLIVXNHINLSDVQLF 665
+VV +PGRL HL NLS++++F
Sbjct: 266 LRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVF 298
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 77.0 bits (181), Expect = 4e-13
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Frame = +3
Query: 201 RDVQIVE-NVT-FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
+D+QI NV+ F + L E L + +GF+ P+ +Q + G L+ +AK+GTG
Sbjct: 63 KDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTG 122
Query: 375 KTVVFSIIALEKLNL-NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGG--- 542
KT VF + L +N +N ++ +++T TRE+ Q D ++G + VE GG
Sbjct: 123 KTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEP 182
Query: 543 LSVNEXIXXXXXXVHIVVGSPGRLKHLI 626
+SVN IVVG+PGRLK LI
Sbjct: 183 VSVN-IQTIETVKPQIVVGTPGRLKDLI 209
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 77.0 bits (181), Expect = 4e-13
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 14/147 (9%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI---- 395
+F M + L GL + G + P+PIQ+ G+P G DL+ A +G+GKT+VF +
Sbjct: 178 SFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIM 237
Query: 396 IALEK-----LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXV-----MGGL 545
ALE+ N G +I+ P+RE+ Q ++I+ H + + MGGL
Sbjct: 238 FALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGL 297
Query: 546 SVNEXIXXXXXXVHIVVGSPGRLKHLI 626
V+E + VHIVV +PGRL ++
Sbjct: 298 PVSEALDVISRGVHIVVATPGRLMDML 324
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 76.6 bits (180), Expect = 5e-13
Identities = 44/152 (28%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
++F S + + L G++K +PIQ +P+ + G D+ A++GTGKT FS+ +
Sbjct: 1 MSFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLI 60
Query: 405 EKLNLNNG-------LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXI 563
++L L +G + +I PTRE+ QI D IK + + L+V + GG ++
Sbjct: 61 QQL-LESGKSASRKTARALIFAPTRELAEQIADNIKAY-TKYTNLSVAAIFGGRKMSSQE 118
Query: 564 XXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
V I+V +PGRL+ I ++++++++
Sbjct: 119 RMLENGVDILVATPGRLEEHIESGNVSVANIE 150
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 76.6 bits (180), Expect = 5e-13
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 5/140 (3%)
Frame = +3
Query: 210 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 389
+I E +F+ LS+ TL GL + KP+ IQ + G D+L AK+G+GKT+ F
Sbjct: 57 KIEETSSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAF 116
Query: 390 SIIALEKLNLN-----NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN 554
I EKL N +GL +I+TPTRE+ QI + + +IG H ++GG ++
Sbjct: 117 LIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAKIGKLH-DFTTGLIIGGQNL- 174
Query: 555 EXIXXXXXXVHIVVGSPGRL 614
+ ++I++ +PGRL
Sbjct: 175 KAEKNRLHQLNIIICTPGRL 194
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 76.6 bits (180), Expect = 5e-13
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +3
Query: 171 PHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLL 350
P D+R +T DV + F L L G+ G++KPSPIQ +P+ G D+L
Sbjct: 80 PKDLR--IKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDIL 137
Query: 351 LEAKSGTGKTVVFSIIALEKLNL-NNGLQVMILTPTREIXXQICDV 485
AK+GTGK+ + I LE+L+L + +Q M++ PTRE+ Q+ +
Sbjct: 138 ARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 76.2 bits (179), Expect = 7e-13
Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
++F S+ LSE + + ++G+ +P+P+Q +P G DL++ A++GTGKT F++ L
Sbjct: 1 MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
Query: 405 EKL--------NLNNG---LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV 551
E+L + +G +V++LTPTRE+ Q+ D K + + + GG+ +
Sbjct: 61 ERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFK-VYARDLNFISACIFGGVGM 119
Query: 552 NEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
N + V ++V PGRL L ++LS V++
Sbjct: 120 NPQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEI 156
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 76.2 bits (179), Expect = 7e-13
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF + L L+ ++ P+PIQ +P G D+L A++GTGKT ++ L
Sbjct: 3 TFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILN 62
Query: 408 KLNLNNGLQV------MILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXX 569
+L N+ + ++L PTRE+ QI D G H L + GG+ +
Sbjct: 63 QLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYG-RHLKLRSVLIYGGVGQGNQVKA 121
Query: 570 XXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
HI+V +PGRL L+ HI L+ +++F
Sbjct: 122 LKRGAHILVATPGRLLDLMNQGHIKLNQLEVF 153
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 76.2 bits (179), Expect = 7e-13
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F +M L+ L + GF P+PIQ +PL D++ A++G+GKT F I +E+
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIER 151
Query: 411 LNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L ++ G + +I++P+RE+ Q V+K+ G L ++GG S+ +
Sbjct: 152 LRAHSARVGARALIMSPSRELALQTLKVVKEFGK-GTDLKTVLLVGGDSLEDQFGFMTTN 210
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
I++ +PGR HL V ++LS ++
Sbjct: 211 PDIIIATPGRFLHLKVEMSLDLSSIK 236
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 75.8 bits (178), Expect = 9e-13
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
++F S+ LS+F L S G+++P+ IQ +P G DL+ A++G+GKT F + L
Sbjct: 1 MSFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLL 60
Query: 405 EKLNL-----NNGLQVMILTPTREIXXQICDVIKQIGSH-HXGLNVEXVMGGLSVNEXIX 566
EKL+ NN ++L PTRE+ Q+ + + + + + GG ++N +
Sbjct: 61 EKLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQ 120
Query: 567 XXXXXVHIVVGSPGRLKHLIVXNHINL 647
IVV +PGRL L+ N ++L
Sbjct: 121 SLSKGCDIVVATPGRLLDLMRKNALDL 147
>UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter
caesariensis|Rep: RNA helicase DbpA - Neptuniibacter
caesariensis
Length = 191
Score = 75.8 bits (178), Expect = 9e-13
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Frame = +3
Query: 204 DVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 383
D V + +F + L + L L G+++ + IQ +P DL+ +AK+G+GKT
Sbjct: 29 DEPYVSDSSFAKLALPKSVLSNLDQLGYKEMTAIQQQALPEVLAEKDLIAKAKTGSGKTA 88
Query: 384 VFSIIALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEX 560
F I L KL N Q ++L PTRE+ + + ++++ L + + GG +
Sbjct: 89 AFGIGLLLKLRPRNFATQALVLCPTRELATHVANELRKLARFTENLKILTLCGGQPIGPQ 148
Query: 561 IXXXXXXVHIVVGSPGRLK-HL 623
I H+VV +PGR+K HL
Sbjct: 149 IGSLEHGAHVVVRTPGRIKDHL 170
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 75.8 bits (178), Expect = 9e-13
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFSIIALE 407
F LSE L + G++KP+ IQ +P DL+ +A++GTGKT F I LE
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 408 KLNL--NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
+++ N ++ +I+TPTRE+ QI + +K + + + + GG S+ +
Sbjct: 80 RIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKR-VKITTLYGGQSLEKQFKDLEKG 138
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
V IVVG+PGR+ + + ++LS V+
Sbjct: 139 VDIVVGTPGRIIDHLNRDTLDLSHVE 164
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 75.8 bits (178), Expect = 9e-13
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Frame = +3
Query: 219 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 398
++ F+ + L++ + G+ +P+PIQ VP G D+ A++GTGKT F++
Sbjct: 131 QDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALP 190
Query: 399 ALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
L KL + L+ ++L PTRE+ Q+ + ++ S + L V GG+ +
Sbjct: 191 ILHKLGAHERRLRCLVLEPTRELALQVEEAFQKY-SKYTDLTATVVYGGVGYGKQREDLQ 249
Query: 576 XXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
V +V +PGRL I + L+DV++
Sbjct: 250 RGVDVVAATPGRLLDHIEQGTMTLADVEI 278
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 75.8 bits (178), Expect = 9e-13
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Frame = +3
Query: 192 TRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 371
T +++ E+ TF + L E + L G P IQ +P G G D+L A++G+
Sbjct: 136 TAAEQIEVAES-TFAELGLPEELVAALERRGMTAPFAIQSRTLPDGIAGRDILGRARTGS 194
Query: 372 GKTVVFSIIALEKL------NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXV 533
GKT+ F + L +L + + ++L PTRE+ Q+ D ++ +G L + V
Sbjct: 195 GKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPLGD-SLDLRLSVV 253
Query: 534 MGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+GG+ I + +++ +PGRL LI + ++L++V +
Sbjct: 254 VGGVPYGRQIAALQRGIDVLIATPGRLVDLIDRDAVSLAEVDV 296
>UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 750
Score = 75.8 bits (178), Expect = 9e-13
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + LS+ T+ GL S + + IQ +P CG D+L AK+G+GKT+ F I LEK
Sbjct: 72 FDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAKTGSGKTLAFLIPVLEK 131
Query: 411 L-----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
L +G+ +I++PTRE+ Q+ DV+K +G +H + ++GG
Sbjct: 132 LYRLRWGPEDGVGSIIISPTRELTGQLFDVLKSVGKYH-SFSAGLLIGGRKDVGMEKEHV 190
Query: 576 XXVHIVVGSPGR-LKHLIVXNHINLSDVQL 662
++I+V +PGR L+H+ + + S +Q+
Sbjct: 191 NELNILVCTPGRLLQHMDETPNFDCSQLQV 220
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 75.8 bits (178), Expect = 9e-13
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
D + + I+ N TF S+ LS+ T + GF + + IQ +P G D+L
Sbjct: 138 DKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGA 197
Query: 357 AKSGTGKTVVFSIIALE-----KLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLN 521
A++G+GKT+ F I A+E K NG V+++ PTRE+ Q V K++ +H
Sbjct: 198 ARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYH-SQT 256
Query: 522 VEXVMGGLSVNEXIXXXXXXVHIVVGSPGRL 614
V V+GG V+++V +PGRL
Sbjct: 257 VGKVIGGEKRKTEAEILAKGVNLLVATPGRL 287
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 75.8 bits (178), Expect = 9e-13
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 401
+F+ + L + + GL++ F+KPS IQ +P L +++ +++SGTGKT F +
Sbjct: 97 SFSELGLPQGIIDGLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTI 156
Query: 402 LEKLNLN--NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
L +++ N N Q + L P+RE+ QI VI+ IG GL V+ + G E
Sbjct: 157 LSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQFCTGLVVDAAIPGAISRE----TG 212
Query: 576 XXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
++VVG+PG + LI ++S ++L
Sbjct: 213 VKANVVVGTPGTVMDLIRRRQFDVSQLKL 241
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/138 (28%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
+ +F+S+ L L L G+ + +P+Q +P G D+ +AK+G+GKT F I
Sbjct: 1 MSTTSFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGI 60
Query: 396 IALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
L+++ +++ Q ++L PTRE+ Q+ ++++ + + + GG + + +
Sbjct: 61 GLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSL 120
Query: 573 XXXVHIVVGSPGRLK-HL 623
HIVVG+PGR++ HL
Sbjct: 121 VHAPHIVVGTPGRIQDHL 138
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 75.4 bits (177), Expect = 1e-12
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+++ + + + L +G P IQ+ +P G D+L A +G+GKT+ F + L +
Sbjct: 231 FSALGVPDEIVAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSR 290
Query: 411 LNL----NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
L+ +N + +IL+PTRE+ QI D + + S GL+ + GG+S
Sbjct: 291 LSATPREDNRPRALILSPTRELAMQIADALSSLASS-MGLSTILIAGGMSYGPQTKAFKR 349
Query: 579 XVHIVVGSPGRLKHLIVXNHINLSDV 656
V +VV +PGRL L+ +LS V
Sbjct: 350 GVDLVVATPGRLVDLLETGDADLSGV 375
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 75.4 bits (177), Expect = 1e-12
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + L E + + G+++P+PIQ +P G DLL A++GTGKT FS+ + K
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 411 LNLN------NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
N + +ILTPTRE+ QI I S GL + V GG+ +
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDY-SDGLGLKTKVVYGGVGRQAQVDSI 122
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+ I+V +PGRL LI IN +++F
Sbjct: 123 ELGLDILVATPGRLLDLIETGDINFKALEVF 153
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 75.4 bits (177), Expect = 1e-12
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
VE +F + + L S G + P PIQ +P G D+L K+G+GKT+ F
Sbjct: 369 VEGKSFLDLGIGSNISRQLASMGAESPFPIQAATIPDVLAGKDVLGRGKTGSGKTIAFGA 428
Query: 396 IALEKLNLNNG---------LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLS 548
+E+L NNG + +IL PTRE+ QI I+ I + GL ++GG+
Sbjct: 429 PLVERLMENNGGKDRQMGRKPRALILAPTRELAQQIDRTIQPI-ARSVGLFTTTIVGGVP 487
Query: 549 VNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+ + V +++ +PGR++ LI ++LS V++
Sbjct: 488 QYKQVAALTRGVDVIIATPGRVEDLIEQGRLDLSQVKV 525
>UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Aspergillus terreus (strain NIH 2624)
Length = 729
Score = 75.4 bits (177), Expect = 1e-12
Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Frame = +3
Query: 195 RTRDVQIVENV-TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 371
R D+ + E+ FT + LSE TL GL +S ++ + IQ V G D+L AK+G+
Sbjct: 35 RVEDLDLKESFKAFTDLPLSEPTLSGLSASHYKTLTDIQSRAVSHALKGRDILGAAKTGS 94
Query: 372 GKTVVFSIIALEKLNL-----NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVM 536
GKT+ F I LE L ++GL +IL+PTRE+ QI +V++++G +H + V+
Sbjct: 95 GKTLAFLIPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRKVGRYHH-FSAGLVI 153
Query: 537 GGLSVNE 557
GG S+ E
Sbjct: 154 GGKSLKE 160
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 75.4 bits (177), Expect = 1e-12
Identities = 43/142 (30%), Positives = 74/142 (52%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + + + L L GF+K PIQ +P+ G D++ +A +GTGKT +SI L++
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 411 LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHI 590
+ G+Q +I+ PTRE+ QI + +K+ + + + + GG S+ + I
Sbjct: 64 IKEGGGIQGLIVAPTRELAVQITEEVKKF-AKYTKVRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 591 VVGSPGRLKHLIVXNHINLSDV 656
+V +PGRL I I++ V
Sbjct: 123 LVATPGRLIDHIKRGSISIDRV 144
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 75.4 bits (177), Expect = 1e-12
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F S LS+ L + GF++P+PIQ +PL D++ A++G+GKT F + +E
Sbjct: 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVE 197
Query: 408 KLNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
KL ++ G + +IL+P+RE+ Q +V K + L + GG S+ E
Sbjct: 198 KLKSHSGKIGARAVILSPSRELAMQTFNVFKDF-ARGTELRSVLLTGGDSLEEQFGMMMT 256
Query: 579 XVHIVVGSPGRLKHLIVXNHINLSDVQ 659
+++ +PGR HL V +++L V+
Sbjct: 257 NPDVIIATPGRFLHLKVEMNLDLKSVE 283
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 74.9 bits (176), Expect = 2e-12
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Frame = +3
Query: 192 TRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 371
T+ + ++ + S+ LSE L +G+ K + IQ +PL G D++ +A++G+
Sbjct: 70 TKGTTSSFLTDIEYKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGS 129
Query: 372 GKTVVFSIIALEKLN-----LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVM 536
GKT+ F I +E LN NG +I++PTRE+ Q DV+++I +H ++
Sbjct: 130 GKTLAFLIPIVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKILAHSERTRT-LII 188
Query: 537 GGLSVNEXIXXXXXXVHIVVGSPGR-LKHLI 626
GG S + IVV +PGR L H+I
Sbjct: 189 GGSSKKKEEEALKKGASIVVATPGRLLDHII 219
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 74.9 bits (176), Expect = 2e-12
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + + L + G+ + +PIQ +P G G D+ A++GTGKTV F I +
Sbjct: 3 FEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVIHN 62
Query: 411 LNLNNGLQ---VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
+ L G+Q ++L PTRE+ QI + K++ H G+ ++GG
Sbjct: 63 I-LTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLEGL 121
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQLF 665
I+V +PGRL +I I++S+V+ F
Sbjct: 122 NGIIVATPGRLIDMIKSGSIDISNVEFF 149
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+S+ L L L GF +P+PIQ +P G D++ A +G+GKT F + L +
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 411 L--NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
L + +++TPTRE+ QI + + + + H ++ V GG+S+ V
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDL-AVHTPISAAAVFGGVSIRPQEHAFRRGV 121
Query: 585 HIVVGSPGRL 614
+++G+PGRL
Sbjct: 122 DVLIGTPGRL 131
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 74.9 bits (176), Expect = 2e-12
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Frame = +3
Query: 219 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 398
+NV F + L + L + ++G++KP+PIQ + + G D L+ AK+GTGKT F+I
Sbjct: 3 KNVQFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIP 62
Query: 399 ALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
AL+ L QV+ILTP RE+ QI ++G V V GG ++ +
Sbjct: 63 ALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKLS-GVKKSL 121
Query: 576 XXVHIVVGSPGRL 614
++ +PGRL
Sbjct: 122 HGAQVISATPGRL 134
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 74.9 bits (176), Expect = 2e-12
Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 9/171 (5%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
DIR+ +T I+ N F+S+ L + L + G++ P+PIQ +P G DLL
Sbjct: 17 DIRSERKTT---IMSN-PFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAA 72
Query: 357 AKSGTGKTVVFSIIALEKLN---------LNNGLQVMILTPTREIXXQICDVIKQIGSHH 509
A++GTGKT F + +LE+L + +++++LTPTRE+ QI D Q +
Sbjct: 73 AQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQI-DQNVQSYIKN 131
Query: 510 XGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
L + GG+++++ IVV + GRL + +I+L+ V++
Sbjct: 132 LPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEI 182
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 74.9 bits (176), Expect = 2e-12
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + LS + GL + P+PIQ +P G G D+L A++GTGKT F + L+
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 411 LNLNNGLQV-------MILTPTREIXXQICDVIKQI--GSHHXGLNVEXVMGGLSVNEXI 563
L + G + +IL PTRE+ QIC+ ++ GSH L ++ ++GG+++ I
Sbjct: 133 L-MKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSH---LKLQVIVGGVAIGPQI 188
Query: 564 XXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
++V +PGRL L+ + LS+ +
Sbjct: 189 KRAERGADLIVATPGRLIDLLDRKALRLSETR 220
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 74.9 bits (176), Expect = 2e-12
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F ++ LS L + G+ + + +Q +PL G D++ A++GTGKT F++ LE+
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 411 LNLNNG----LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
L+ L+ +++TPTRE+ Q+C I++ S L V GG ++N
Sbjct: 84 LSKQPNDKPLLRALVMTPTRELAIQVCANIQKY-SQFLPLKTLAVYGGANMNPQRKGVEQ 142
Query: 579 XVHIVVGSPGRLKHLIVXNHINLSDV 656
V I+V +PGRL +I H++LS V
Sbjct: 143 GVDILVATPGRLFDIIGQFHLDLSSV 168
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 74.9 bits (176), Expect = 2e-12
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F + ++ L + +GF +P+PIQ G P+ G DL+ A++G+GKT+ + + A+
Sbjct: 97 SFHDVGFPDYVLQEIEKAGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTIAYLLPAIV 156
Query: 408 KLNL------NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXX 569
+N +G V++L PTRE+ QI + G+ N + GG+ +
Sbjct: 157 HVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKNT-CIYGGVPKGPQVRD 215
Query: 570 XXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
V IV+ +PGRL ++ NH NL V +
Sbjct: 216 LQKGVEIVIATPGRLIDMLESNHTNLRRVTI 246
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 74.5 bits (175), Expect = 2e-12
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
FT L E + L + +P+PIQ +PL G D++ ++K+G+GKT F+I E
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 411 LNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
+ L Q ++L PTRE+ Q+ D I +G + V V GG ++ H
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVG-RMKRVKVPVVFGGFPFDKQALTLKQKSH 124
Query: 588 IVVGSPGRL 614
IVVG+PGR+
Sbjct: 125 IVVGTPGRV 133
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 74.5 bits (175), Expect = 2e-12
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Frame = +3
Query: 252 EFTLXGLISS-GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----- 413
+FT+ IS GF+ P+ IQ +P+ G DLL A +GTGKT+ F A++ +
Sbjct: 25 DFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAVQHILDRDE 84
Query: 414 NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIV 593
+V+IL P+RE+ QI +V++Q+ + H + ++GG I+
Sbjct: 85 QSTTAPKVLILAPSRELARQIFNVVEQL-TKHTRIQSHLIIGGTPYGMQQQQLSEPCDIL 143
Query: 594 VGSPGRLKHLIVXNHINLSDVQLF 665
V +PGRL L ++L+DV F
Sbjct: 144 VATPGRLVELDEKQWLDLTDVSYF 167
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
++F S + G+ + G+++P+PIQ +P G D++ A++GTGKT +++ +
Sbjct: 1 MSFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPII 60
Query: 405 EK-LNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
+K L+ G ++ +++ PTRE+ QI D + +G + + GG+++++ I
Sbjct: 61 QKMLSTPRGRVRTLVIAPTRELACQISDSFRSLG-QRARIRECSIYGGVNMDQQIRRLRS 119
Query: 579 XVHIVVGSPGRLKHLIVXNHINLSDVQ 659
V +VV PGRL I I++ V+
Sbjct: 120 GVDVVVACPGRLLDHIWRGTIDVCGVE 146
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 74.5 bits (175), Expect = 2e-12
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Frame = +3
Query: 216 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
+E +F + + L +G P PIQ +P+ G D++ +AK+GTGKT+ F I
Sbjct: 34 IEEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTLGFGI 93
Query: 396 IAL-----------EKLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGG 542
AL +KL + Q +++ PTRE+ Q+ ++ + + + GG
Sbjct: 94 PALQRVVGRDDPGFDKLAVPGAPQALVIVPTRELAVQVAKDLEN-AARKRNARIATIYGG 152
Query: 543 LSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+ + V IVVG+PGRL L H++L +V++
Sbjct: 153 RAYEPQVDSLQKGVEIVVGTPGRLIDLYKQKHLSLKNVKI 192
>UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP4 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 859
Score = 74.5 bits (175), Expect = 2e-12
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
Frame = +3
Query: 219 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 398
E F+ + +S T GL SS F P+PIQ +P D+L AK+G+GKT+ F I
Sbjct: 58 EITLFSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIP 117
Query: 399 ALEKLNLN-----NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXI 563
LE+L L +GL ++++PTRE+ Q ++ IG +H + V+GG + E
Sbjct: 118 LLERLYLEKWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYH-NFSAGLVIGGKPLKEE- 175
Query: 564 XXXXXXVHIVVGSPGR-LKHL 623
++I++ +PGR L+HL
Sbjct: 176 QERLGRMNILIATPGRLLQHL 196
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = +3
Query: 342 DLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGL 518
D++ AK+GTGKT F + L+ +++NN +Q +IL PTRE+ QI + H +
Sbjct: 43 DIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAEHTSQV 102
Query: 519 NVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
++ + GG+ + I HI+V +PGRL L+ I++ + F
Sbjct: 103 SIATLCGGIPIKPQIERLKEATHIIVATPGRLADLVKREAIDIKSISYF 151
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 74.1 bits (174), Expect = 3e-12
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 407
F+ L + L L ++KP PIQ+ +P CG D+L A++G+GKT+ + + A+
Sbjct: 390 FSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETGSGKTMAYLLPAIRH 449
Query: 408 -----KLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
KL N G+ V+I+ PTRE+ QI V G+ + V GG + E +
Sbjct: 450 VLYQPKLRENEGMIVLIIAPTRELASQI-GVESSKLCKLVGIRTKAVYGGSPIGEQLNAL 508
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
V IV G+PGRL ++ ++ +++++
Sbjct: 509 KRGVEIVCGTPGRLIEVLTISNGKVTNLR 537
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 74.1 bits (174), Expect = 3e-12
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
+VTF S+ LS + L S +KP+ IQ V G D + AK+G+GKT+ F++
Sbjct: 151 DVTFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPI 210
Query: 402 LEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
+E++ + G+ ++LTPTRE+ Q+ + IG GL ++GG+ + +
Sbjct: 211 VERIARDPFGVWAVVLTPTRELAYQLSEQFLVIGK-PLGLTTATIVGGMDMMKQAQELEA 269
Query: 579 XVHIVVGSPGRLKHLI 626
HI+V +PGRL L+
Sbjct: 270 RPHIIVATPGRLCDLL 285
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 73.7 bits (173), Expect = 4e-12
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
+ TF L+ L + G+ P+PIQ +P+ G D++ A++GTGKT FS+
Sbjct: 10 DATFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPI 69
Query: 402 LEKL---------NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN 554
+++L + ++ +ILTPTRE+ Q+ + + H L V GG+ +N
Sbjct: 70 IQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAY-AKHTPLRSAVVFGGVDMN 128
Query: 555 EXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+ V I++ +PGRL + NL VQ+
Sbjct: 129 PQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQI 164
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 73.7 bits (173), Expect = 4e-12
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Frame = +3
Query: 219 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 398
E +F M LS L GL S GF KP+PIQ +P+ G D++ A +G+GKT F +
Sbjct: 291 EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVP 350
Query: 399 ALEKLNLN----NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIX 566
LE+L +V+ILTPTRE+ Q V ++ S H + +GGLS+
Sbjct: 351 ILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLAS-HTDIKFCLAVGGLSLKVQEA 409
Query: 567 XXXXXVHIVVGSPGR 611
+V+ +PGR
Sbjct: 410 ELRLRPDVVIATPGR 424
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 73.7 bits (173), Expect = 4e-12
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F M LS L GL S GF KP+PIQ +P+ G D++ A +G+GKT F + LE
Sbjct: 277 SFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILE 336
Query: 408 KLNLN----NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
+L +V++LTPTRE+ Q V ++ S H + +GGLS+
Sbjct: 337 RLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLAS-HTDIKFCLAVGGLSLKVQEGELR 395
Query: 576 XXVHIVVGSPGR 611
+V+ +PGR
Sbjct: 396 LRPDVVIATPGR 407
>UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;
Coelomata|Rep: ATP-dependent RNA helicase DDX18 - Homo
sapiens (Human)
Length = 670
Score = 73.7 bits (173), Expect = 4e-12
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Frame = +3
Query: 219 ENVTFTSM--LLSEFTLXGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVF 389
E+ +F S+ L++E TL + GF + IQ + PL + G DLL AK+G+GKT+ F
Sbjct: 175 EDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLE-GRDLLAAAKTGSGKTLAF 233
Query: 390 SIIALE---KLNL--NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN 554
I A+E KL NG V+IL+PTRE+ Q V+K++ +HH +MGG + +
Sbjct: 234 LIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVH-TYGLIMGGSNRS 292
Query: 555 EXIXXXXXXVHIVVGSPGRL 614
++I+V +PGRL
Sbjct: 293 AEAQKLGNGINIIVATPGRL 312
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 73.3 bits (172), Expect = 5e-12
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
+TF + L T+ + SG+ P+PIQ +P G D++ A++GTGKT F + +
Sbjct: 24 LTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPII 83
Query: 405 EKLNLNN-----GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXX 569
E L + + ++LTPTRE+ Q+ + + + + L + V GG+S+ +
Sbjct: 84 ELLRAEDKPKRYQVHSLVLTPTRELAAQV-EASAKAYTKYLALRSDAVFGGVSIRPQVKR 142
Query: 570 XXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
V I+V +PGRL LI I ++++
Sbjct: 143 LQGGVDILVATPGRLLDLINQKMIRFDNLKV 173
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 73.3 bits (172), Expect = 5e-12
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Frame = +3
Query: 210 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 389
Q+ E V + + LS + + G+ + +P+Q +P D++ +A +GTGKT F
Sbjct: 7 QVNEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAF 66
Query: 390 SIIALEKLNL-NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIX 566
I +E ++ ++ +Q ++L PTRE+ QI D ++ + G+ + GG + + I
Sbjct: 67 GIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQIT 126
Query: 567 XXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
IVV +PGRL + + L V+
Sbjct: 127 TLKKHPQIVVATPGRLMDHMKRRTVKLDKVE 157
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 73.3 bits (172), Expect = 5e-12
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIA 401
+TF + L+ L + GF+ PS IQ +P L D++ A++GTGKT F
Sbjct: 1 MTFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPL 60
Query: 402 LEKLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
L+ ++ ++ Q +I+ PTRE+ QI + +K H G+ V V GG ++ E
Sbjct: 61 LQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISR 120
Query: 579 XVHIVVGSPGRLKHLIVXNHINLS 650
IVV +PGR++ ++ ++++
Sbjct: 121 GAQIVVATPGRMQDMMRRRMVDIT 144
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 73.3 bits (172), Expect = 5e-12
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Frame = +3
Query: 183 RNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAK 362
R++ T D V F+S+ L + L GL GFQ+ +P+Q +P D++ AK
Sbjct: 7 RDTRITTDDVKGSGVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAK 66
Query: 363 SGTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIXXQICDVIKQIGSHHXGL--NVEXV 533
+GTGKT F I L+ +N + +Q ++L TRE+ Q V K + + + +
Sbjct: 67 NGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCA 126
Query: 534 MGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
+GG+S+ E +V+ +PGRL+ LI +N D +
Sbjct: 127 IGGVSIAEDRERAREKPLVVLATPGRLQQLIDEEILNFRDCSI 169
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 73.3 bits (172), Expect = 5e-12
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF S+ L + + G++ P+ IQ +P G D++ A++G+GKT F + L+
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 408 KL-NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
+L +IL PTRE+ QI I +G G+ V ++GGL N
Sbjct: 112 RLLQRTQRFYALILAPTRELCLQISQQILAMGGT-LGVTVVTLVGGLDHNTQAIALAKKP 170
Query: 585 HIVVGSPGR-LKHLIVXNHINLSDVQL 662
H+VVGSPGR + HL +L V++
Sbjct: 171 HVVVGSPGRVVDHLQQTKGFSLKSVKV 197
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 72.9 bits (171), Expect = 6e-12
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF +M LS L + S F P+PIQ +P+ G D+ A +GTGKT + + LE
Sbjct: 155 TFYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLE 214
Query: 408 KL---NLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
+L L+ + +V++L PTRE+ Q+ V KQ+ S + V +GGL V
Sbjct: 215 RLLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQL-SQFTSVEVGLSVGGLDVKVQESVLR 273
Query: 576 XXVHIVVGSPGRL-KHLIVXNHINLSDVQL 662
IV+ +PGRL HL +L +++
Sbjct: 274 KNPDIVIATPGRLIDHLANTPTFSLDTIEV 303
>UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15032, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 574
Score = 72.9 bits (171), Expect = 6e-12
Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Frame = +3
Query: 219 ENVTFTSM--LLSEFTLXGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVF 389
E+ +F S+ L+SE TL G+ GF+ + IQ + PL + G D+L AK+G+GKT+ F
Sbjct: 57 EDTSFASLAELVSENTLKGVKELGFEHMTEIQHKTIRPLLE-GRDVLAAAKTGSGKTLAF 115
Query: 390 SIIALE-----KLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN 554
I +E K NG V+IL+PTRE+ Q V+K++ +HH +MGG + +
Sbjct: 116 LIPCIELIYKLKFMPRNGTGVIILSPTRELAMQTYGVMKELMTHHVH-TYGLIMGGSNRS 174
Query: 555 EXIXXXXXXVHIVVGSPGRL 614
++I+V +PGRL
Sbjct: 175 AEAQKLANGINILVATPGRL 194
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 72.9 bits (171), Expect = 6e-12
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 15/159 (9%)
Frame = +3
Query: 225 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
++F + L + L +Q+P+PIQL +P+ G D++ A++GTGKT F++ L
Sbjct: 1 MSFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLL 60
Query: 405 EKL-----NL----------NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMG 539
+L NL + + ++L PTRE+ Q+ I+Q ++ + V G
Sbjct: 61 HQLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQY-AYGSSVTSVMVYG 119
Query: 540 GLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDV 656
G+S+ E I HI+V +PGRL L+ ++LS +
Sbjct: 120 GVSIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQL 158
>UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=1;
Pediococcus pentosaceus ATCC 25745|Rep: Superfamily II
DNA and RNA helicase - Pediococcus pentosaceus (strain
ATCC 25745 / 183-1w)
Length = 438
Score = 72.9 bits (171), Expect = 6e-12
Identities = 40/126 (31%), Positives = 71/126 (56%)
Frame = +3
Query: 282 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 461
GF +P+ IQ + G +L + +G+GKT+ F++ +EK+ +G Q+++L+P++E
Sbjct: 13 GFAEPTLIQQKVAEPLRNGESVLGLSPTGSGKTLAFALPLMEKITPGDGTQLLVLSPSQE 72
Query: 462 IXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHI 641
+ Q DV ++ + GL V + GG +V I IVVG+PGR+ LI +
Sbjct: 73 LAIQTTDVFREWAA-LIGLRVTSITGGANVQRQIERLKKKPEIVVGTPGRVLTLINERRL 131
Query: 642 NLSDVQ 659
+S++Q
Sbjct: 132 KVSEIQ 137
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 72.9 bits (171), Expect = 6e-12
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+ + L + G+ + G+ P+P+QL +P+ G DL+ A++GTGKT F++ L +
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 411 L--NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
L + G +V++L PTRE+ Q+ + G + + GG+ +
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVETAFRDFG-RFTDVRSTIIHGGVGYGKQRSDLRAGT 121
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQL 662
IV+ + GRL I I L V++
Sbjct: 122 DIVIATVGRLMDFIKEKEIRLDSVEV 147
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 72.9 bits (171), Expect = 6e-12
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF + L+ + + GF+ PS IQ + +P G D++ AK+G+GKT F+I L
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
+L+ + G+ +ILTPTRE+ QI + IG+ +N V+GG+
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGA-PMNVNCSVVIGGIDNVTQALILDKRP 123
Query: 585 HIVVGSPGRL-KHL 623
HI+V +PGRL HL
Sbjct: 124 HIIVATPGRLASHL 137
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 72.9 bits (171), Expect = 6e-12
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + LS + + G ++P+P+QL +P G D L AK+G+GKT F + L+K
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 411 LNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
L+ + G+ ++LTPTRE+ QI + + +G GL ++GG+ + H
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGK-PLGLKDCIIVGGMDMVAQALELSRKPH 122
Query: 588 IVVGSPGRL-KHLIVXNHINLSDVQ 659
+V+ +PGRL HL N ++ ++
Sbjct: 123 VVIATPGRLADHLRSSNTFSIKKIR 147
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 72.9 bits (171), Expect = 6e-12
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Frame = +3
Query: 174 HDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLL 353
HD V+ E TF + +++ G+ KP+ IQ+ +PL G D++
Sbjct: 7 HDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIG 66
Query: 354 EAKSGTGKTVVFSIIALEK-LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEX 530
A++G+GKT F++ L L L ++LTPTRE+ QI + + +GS G+
Sbjct: 67 LAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGS-SIGVQSAV 125
Query: 531 VMGGLSVNEXIXXXXXXVHIVVGSPGRL-KHLIVXNHINL 647
++GG+ HI++ +PGRL HL NL
Sbjct: 126 IVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNL 165
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 72.5 bits (170), Expect = 8e-12
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
N FTS+ EF G KP+ +Q V G + ++ +++GTGKT F++
Sbjct: 2 NNPFTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPI 61
Query: 402 LEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEX--VMGGLSVNEXIXXX 572
+ L+ + G+ ++++PTRE+ QIC K G G+N + ++GGL++ +
Sbjct: 62 ISTLSKDPYGIYALVISPTRELAQQICQQFKIFG---RGMNADICPIIGGLAITDQASAL 118
Query: 573 XXXVHIVVGSPGRLKH 620
HIVV +PGR+ H
Sbjct: 119 EKNPHIVVATPGRILH 134
>UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 32 - Oryza sativa subsp. japonica (Rice)
Length = 773
Score = 72.5 bits (170), Expect = 8e-12
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + LS T GL +G+ + S IQ +P CG D+L AK+G+GKT+ F I LEK
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLEK 141
Query: 411 L-----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
L +G+ ++L+P +++ QI +V +++G H G + ++G +
Sbjct: 142 LYRERWGPEDGVGCIVLSPNKDLAGQIFNVFQKVGKLH-GFSAACIVGNRKGLDEEKAVI 200
Query: 576 XXVHIVVGSPGR-LKHLIVXNHINLSDVQ 659
++I+V +PGR L+H+ + + S +Q
Sbjct: 201 NNMNILVCTPGRLLQHMGETTNFDCSQIQ 229
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 72.5 bits (170), Expect = 8e-12
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Frame = +3
Query: 207 VQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 386
+ + E F+ LS+ TL GL + ++ + IQ + L G D+L AK+G+GKT+
Sbjct: 63 INVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLA 122
Query: 387 FSIIALEKL-----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV 551
F + LE L +GL V+I++PTRE+ Q +V++++G +H + ++GG +
Sbjct: 123 FLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNH-DFSAGLIIGGKDL 181
Query: 552 NEXIXXXXXXVHIVVGSPGR-LKHLIVXNHINLSDVQL 662
++I+V +PGR L+H+ + +D+Q+
Sbjct: 182 KHE-AERINNINILVCTPGRLLQHMDETVSFHATDLQM 218
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 72.1 bits (169), Expect = 1e-11
Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL- 404
+F + + E L G P PIQ +P+ G DL+ +A++GTGKT+ F I L
Sbjct: 54 SFADLGVREDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILL 113
Query: 405 ----------EKLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVN 554
E+L Q +++ PTRE+ Q+ I S G V V GG+
Sbjct: 114 RITLPGDEGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVR-GARVLTVYGGVGYE 172
Query: 555 EXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
I V +VVG+PGRL L ++LS V++
Sbjct: 173 SQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRI 208
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 72.1 bits (169), Expect = 1e-11
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+ + LS+ L L +GF KP+PIQ +PL D++ +A++G+GK+ F + LE
Sbjct: 3 FSKLGLSQNILQALKQNGFTKPTPIQERVIPLVLERHDIMAKAQTGSGKSASFILPILEL 62
Query: 411 LNLNN-----GLQVMILTPTREIXXQICDVIKQIGSHHXGL-NVEXVMGGLSVNEXIXXX 572
L+ ++ ++V++LTPTRE+ QI + G+ V V+GG + E +
Sbjct: 63 LSRDSYEGKAKIKVLVLTPTRELTQQIVEAFNTFGAFMSKKPKVVGVIGGEGIGEQLFNI 122
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
I+V + GR ++ + LS V F
Sbjct: 123 QKGCDILVATSGRFLDILSKKQMILSHVDFF 153
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F S+ L L + G+++PSPIQ +P G D+L A++GTGKT F++ L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 411 L-NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVH 587
N QV++L PTRE+ Q+ ++ H + V + GG
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 588 IVVGSPGRLKHLIVXNHINLSDVQ 659
VVG+PGR+ I + L ++
Sbjct: 128 WVVGTPGRVMDHIRRGTLKLEGIR 151
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Frame = +3
Query: 285 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-------NLNNGLQVMI 443
+ P+PIQ +P G D+L A +G+GKT F++ L++L ++ ++
Sbjct: 29 YAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLV 88
Query: 444 LTPTREIXXQICDVIKQIGSHHXG-LNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKH 620
L PTRE+ Q+ D SH G L + GG+SVN + ++V +PGRL
Sbjct: 89 LVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVATPGRLLD 148
Query: 621 LIVXNHINLSDV 656
L+ N + L+ V
Sbjct: 149 LLASNALKLNRV 160
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 72.1 bits (169), Expect = 1e-11
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Frame = +3
Query: 210 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 389
++ + F + L + + + GF+ S IQ +P+ G+D++ +A++GTGKT F
Sbjct: 66 EVEGKMRFHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLGYDIIGQAQTGTGKTAAF 125
Query: 390 SI--------IALEKLNLNNGLQVMILTPTREIXXQICD-VIKQIGSHHXGLNVEXVMGG 542
I LE+ NN + +I+ PTRE+ QI D +K + H LNV ++GG
Sbjct: 126 LIAMISDFLDYPLEEKRANNFARGLIIAPTRELAIQIADEAVKLTSNCH--LNVVTLVGG 183
Query: 543 LSV-NEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
LS + I V I+V +PGRL + L V+
Sbjct: 184 LSYEKQKIALETENVDILVATPGRLLDFARSRKVQLGKVE 223
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Frame = +3
Query: 285 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE------KLNLNNGLQVMIL 446
+++P PIQ+ +P CG D++ A++G+GKT+ F + A+ L N+G+ V+++
Sbjct: 388 YERPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVI 447
Query: 447 TPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRL 614
PTRE+ QI + + S GL + GG + E + IV+G+PGRL
Sbjct: 448 APTRELVIQISNESSKF-SRAVGLKTLAIYGGAGIGEQLNALKRGAEIVIGTPGRL 502
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 72.1 bits (169), Expect = 1e-11
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF+ + L E L L GF +P+ IQ +P G D+L A +GTGKT + + AL+
Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64
Query: 408 KL-----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
L + +++ILTPTRE+ Q+ D +++ + H L++ + GG++
Sbjct: 65 HLLDFPRKKSGPPRILILTPTRELAMQVSDHAREL-AKHTHLDIATITGGVAYMNHAEVF 123
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
IVV + GRL I + + V+
Sbjct: 124 SENQDIVVATTGRLLQYIKEENFDCRAVE 152
>UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DBP4 - Encephalitozoon cuniculi
Length = 452
Score = 72.1 bits (169), Expect = 1e-11
Identities = 44/150 (29%), Positives = 84/150 (56%), Gaps = 6/150 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F + + + GL +GF +Q +P+ G D++ +++GTGKT+ F + L++
Sbjct: 6 FEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLVPTLQR 65
Query: 411 L-----NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
L +GL +++TPTRE+ QI DV+ +I + + L+ +MGGL + +
Sbjct: 66 LVSLGWGGGDGLGCLVITPTRELALQIFDVLSRI-AKYTVLSTGLIMGGLEAEDEL-LKV 123
Query: 576 XXVHIVVGSPGR-LKHLIVXNHINLSDVQL 662
++I+V +PGR L+HL +++ ++VQ+
Sbjct: 124 NQMNILVCTPGRLLQHLQENPYLSTANVQI 153
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 71.7 bits (168), Expect = 1e-11
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI---- 395
+F M + L GL G KP+PIQ+ G+P G D++ A +G+GKT+VF +
Sbjct: 180 SFKEMKFHKGILLGLEQKGITKPTPIQVQGIPAVLSGRDIIGIAFTGSGKTLVFVLPLIM 239
Query: 396 IALEK-----LNLNNGLQVMILTPTREIXXQICDVIKQIGS---HHXGLNVE--XVMGGL 545
LE+ N G +I+ P+RE+ Q D+I+ + HH + +GG+
Sbjct: 240 FCLEQEVALPFGRNEGPYGLIICPSRELAKQTYDIIQHYTNSLRHHHCPEIRCCLAIGGV 299
Query: 546 SVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINL 647
V+E + VHI+V +PGRL ++ + L
Sbjct: 300 PVSESLDVISRGVHIMVATPGRLMDMLDKKMVKL 333
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 71.7 bits (168), Expect = 1e-11
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Frame = +3
Query: 180 IRNSTRTRDV-QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
+ NS + D Q E++TF M LS L + + F +P+PIQ +P+G G D+
Sbjct: 165 VGNSGFSEDASQYDESLTFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICAC 224
Query: 357 AKSGTGKTVVFSIIALEKLNLNNG----LQVMILTPTREIXXQICDVIKQIGSHHXGLNV 524
A +GTGKT F + LE+L +V++L PTRE+ Q+ V +Q+ + +
Sbjct: 225 AATGTGKTAAFMLPVLERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQL-AQFTEVTT 283
Query: 525 EXVMGGLSVNEXIXXXXXXVHIVVGSPGRL 614
+GGL V +++ +PGRL
Sbjct: 284 CLAVGGLDVKTQEAALRSGPDVLIATPGRL 313
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Frame = +3
Query: 279 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IALEKLNLNNGLQ----VMI 443
+G++ P+P+Q+ VP+G G D++ A +G+GKTV F + + + L + +I
Sbjct: 188 AGYEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRALQSESASPSCPACLI 247
Query: 444 LTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHL 623
LTPTRE+ QI + K++ + ++GG+ + + + IV+G+PGRL +
Sbjct: 248 LTPTRELAIQIEEQAKELMRGLPNMGTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLEI 307
Query: 624 IVXNHINLSDVQ 659
+ + L V+
Sbjct: 308 LKQKAVQLDHVR 319
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 71.7 bits (168), Expect = 1e-11
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F L+E L + P+PIQ +P G D++ A++GTGKT F++ L
Sbjct: 17 SFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILH 76
Query: 408 KLNLN------NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXX 569
+L + +V++L+PTRE+ QI D G H L+ +GG+ + +
Sbjct: 77 RLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYG-RHIRLSSTLAIGGVPMGRQVRS 135
Query: 570 XXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
V ++V +PGRL L+ N + L V+
Sbjct: 136 LMQGVEVLVATPGRLLDLVQSNGLKLGSVE 165
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 71.7 bits (168), Expect = 1e-11
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Frame = +3
Query: 162 MSLPHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGF 341
++ P +I ++T +++ F + L L L G+Q+ +P+Q +P+
Sbjct: 3 INTPENISDNTSETSPELLH---FNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNT 59
Query: 342 DLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGL 518
D ++ A +G+GKT F++ L KL + Q ++L PTRE+ Q+ D ++++ +
Sbjct: 60 DAVVRADTGSGKTTAFALTLLAKLEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNI 119
Query: 519 NVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLS 650
+ + GG H++VG+PGR+ + +++LS
Sbjct: 120 KILTLCGGEPSRIQTNSLEHGAHVLVGTPGRVLDHLEQRNVDLS 163
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 71.7 bits (168), Expect = 1e-11
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+ LL F L + G++ P+ IQ +P G D++ A++G+GKT F++ L++
Sbjct: 8 FSPALLPAF-LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQ 66
Query: 411 L-NLNNGL----QVMILTPTREIXXQICDVIKQIGSH-HXGLNVEXVMGGLSVNEXIXXX 572
L N G + +IL PTRE+ Q+ + I + + V V GG+S+N +
Sbjct: 67 LANAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNL 126
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDV 656
IVV +PGRL L+ N + +S+V
Sbjct: 127 RGGADIVVATPGRLLDLLEHNALKISEV 154
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 71.7 bits (168), Expect = 1e-11
Identities = 39/140 (27%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Frame = +3
Query: 246 LSEFTLXGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL- 419
+ E L L + GF + IQ + P+ K G D+L ++K+G+GKT+ F I A+ ++
Sbjct: 10 IPEALLGTLETLGFTTMTEIQQKSIGPILK-GKDILAQSKTGSGKTLAFGIPAVMGTDVK 68
Query: 420 NNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVG 599
+N Q +++TPTRE+ Q+ +++I ++ L + + GG+ + HI++G
Sbjct: 69 SNKPQTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGAHILIG 128
Query: 600 SPGRLKHLIVXNHINLSDVQ 659
+PGR++ + + L ++
Sbjct: 129 TPGRIQDHLAKGTLTLESIK 148
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 71.7 bits (168), Expect = 1e-11
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALE 407
FT++ L + L + GF++PSPIQ +P L D++ +A++GTGKT F + ++
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
K+ Q +IL PTRE+ Q+ + IK G+ + GG + + V
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEIKSF-CKGRGITTVTLYGGAPIMDQKRALKKGV 122
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQ 659
+VV +PGR H I + L ++
Sbjct: 123 DLVVATPGRCIHFIEDGKLELDSLE 147
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 71.7 bits (168), Expect = 1e-11
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
R+RD V FT++ L+E L + ++ P+PIQ +P+ G DL+ A++GTG
Sbjct: 48 RSRDESAVLT-DFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTG 106
Query: 375 KTVVFSIIALEKLNLN------NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVM 536
KT F + L ++ N + ++L PTRE+ QI D + G +V V+
Sbjct: 107 KTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGK-FTRPSVAVVI 165
Query: 537 GGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
GG V ++V +PGRL + I L V+
Sbjct: 166 GGAKPGPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVE 206
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 71.7 bits (168), Expect = 1e-11
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Frame = +3
Query: 273 ISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILT 449
I +G+Q P+Q H +P G DL++++++G+GKT F + LE+L+ Q ++L
Sbjct: 53 IRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVLV 112
Query: 450 PTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGR-LKHLI 626
PTRE+ Q+ + + GL V V GG+ + H VVG+PGR L HL+
Sbjct: 113 PTRELALQVEHEARTL-FEGTGLRVAAVYGGVGYGKQNDALREGAHFVVGTPGRVLDHLL 171
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 71.7 bits (168), Expect = 1e-11
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Frame = +3
Query: 207 VQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 386
V+ E TF + +++ G+ KP+ IQ+ +PL G D++ A++G+GKT
Sbjct: 7 VEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 66
Query: 387 FSIIALEK-LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXI 563
F++ L L L ++LTPTRE+ QI + + +GS G+ ++GG+
Sbjct: 67 FALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGS-SIGVQSAVIVGGIDSMSQS 125
Query: 564 XXXXXXVHIVVGSPGRL-KHLIVXNHINL 647
HI++ +PGRL HL NL
Sbjct: 126 LALAKKPHIIIATPGRLIDHLENTKGFNL 154
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 71.7 bits (168), Expect = 1e-11
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
FTS L + + + SG++ P+PIQ +P+ G DL+ A++G+GKT F + L K
Sbjct: 247 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSK 306
Query: 411 L-----NLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXX 572
L L G QV+I++PTRE+ QI + ++ + L + V GG S
Sbjct: 307 LLEDPHELELGRPQVVIVSPTRELAIQIFNEARKF-AFESYLKIGIVYGGTSFRHQNECI 365
Query: 573 XXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
H+V+ +PGRL + I D +
Sbjct: 366 TRGCHVVIATPGRLLDFVDRTFITFEDTR 394
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Frame = +3
Query: 285 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTRE 461
F PSPIQ +PL G D + A++GTGKT F++ L+ L+ + Q +IL PTRE
Sbjct: 26 FITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRE 85
Query: 462 IXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHI 641
+ Q+ + + + + + + + GG + +VVG+PGR+ I +
Sbjct: 86 LAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSGAQVVVGTPGRILDHIDKGTL 145
Query: 642 NLSDVQLF 665
L++++ F
Sbjct: 146 LLNNLKTF 153
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F M L L + F P+P+Q +PL G D+L A++GTGKT+ F+I +
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 408 K-LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
K L N +++ PTRE+ Q+ + I ++ + L + ++GG + +
Sbjct: 63 KLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQRRP 122
Query: 585 HIVVGSPGRL 614
IV+G+PGR+
Sbjct: 123 RIVIGTPGRI 132
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 71.3 bits (167), Expect = 2e-11
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI---- 395
+F + L + L + +SG+ KP+P+Q + + DL+ A +G+GKT F +
Sbjct: 410 SFETAGLRDLVLQNIKASGYTKPTPVQKGAIAVVLARRDLIASAVTGSGKTAAFLVPVVN 469
Query: 396 IALEKL--NLNNGL----QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNE 557
I LEK +G +V+I++PTRE+ QI ++ SH+ L V GG V+
Sbjct: 470 ILLEKQVQGAPSGEVQKPEVVIISPTRELAIQIHREARKF-SHNSVLKSVIVYGGTQVSH 528
Query: 558 XIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+I+VG+PGRLK + I+ S+VQ F
Sbjct: 529 QKSSLMNGCNILVGTPGRLKDFVDKGFIDFSNVQFF 564
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
+F M+L+E L G+ + GF+KPS IQ + GFD++ +++SGTGKT + I AL+
Sbjct: 22 SFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAALQ 81
Query: 408 KLN-LNNGLQVMILTPTREIXXQICDVI 488
+++ + Q +IL PTRE+ QI V+
Sbjct: 82 RIDMMKEDTQAIILAPTRELANQIQKVV 109
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 70.9 bits (166), Expect = 3e-11
Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Frame = +3
Query: 201 RDVQIVENVT--FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
+++++ + T F ++ ++ L G+ ++G +P PIQ +P G D+L A++G+G
Sbjct: 77 KEIELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSG 136
Query: 375 KTVVFSIIALEKL------NLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVM 536
KT FS+ L+K+ + +IL PTRE+ QI I+ + S ++ V+
Sbjct: 137 KTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNV-SKSAHISTALVL 195
Query: 537 GGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
GG+S I + +++ +PGRL L+ ++LS +
Sbjct: 196 GGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTR 236
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 70.9 bits (166), Expect = 3e-11
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Frame = +3
Query: 207 VQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 386
++ + +V F + + + + L + P+P+Q +P G DLL A++GTGKT
Sbjct: 1 MRFIMSVNFADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAA 60
Query: 387 FS---IIALEKLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNE 557
F I A+++ N +IL PTRE+ Q+ D + Q + H L + V GG S+
Sbjct: 61 FGLPIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQY-AEHTDLRIVCVYGGTSIGV 119
Query: 558 XIXXXXXXVHIVVGSPGRLKHLIVXNHINLS 650
I++ +PGRL + ++N+S
Sbjct: 120 QKNKLEEGADILIATPGRLLDHLFNGNVNIS 150
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 70.9 bits (166), Expect = 3e-11
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F SM L + + GF P+PIQ +PL G D++ +++G+GKT F I + K
Sbjct: 301 FESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIPLINK 360
Query: 411 LNLNN---GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXX 581
L ++ G + +I+ PTRE+ QI V+K L ++GG +
Sbjct: 361 LQNHSRIVGARALIVVPTRELALQIASVLKTF-IKFTDLTYTLIVGGHGLEGQFESLASN 419
Query: 582 VHIVVGSPGRLKHLIVXNHINLSDVQ 659
I++ +PGRL LI ++L+ V+
Sbjct: 420 PDIIIATPGRLSQLIDETDLSLNKVE 445
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 70.9 bits (166), Expect = 3e-11
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
N+ F+S+ L L GL +GF +PIQ +P+ G D+ +A++GTGKT+ F ++
Sbjct: 8 NLNFSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVV 67
Query: 402 LEKLNLNNGL--------QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNE 557
+ +L GL + +IL PTRE+ QI + + G + GL + GG+ ++
Sbjct: 68 VNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGG-NLGLRFALIYGGVDYDK 126
Query: 558 XIXXXXXXVHIVVGSPGRL 614
+V+ +PGRL
Sbjct: 127 QREMLRKGADVVIATPGRL 145
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 70.9 bits (166), Expect = 3e-11
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Frame = +3
Query: 279 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQ-------V 437
+GFQKP+PIQ P+ G DL+ A++GTGKT+ + + L L L+ +
Sbjct: 260 AGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGM 319
Query: 438 MILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLK 617
++LTPTRE+ Q+ + + GL V GG + +E I V I++ +PGRL
Sbjct: 320 LVLTPTRELALQVEGECCKYS--YKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLN 377
Query: 618 HLIVXNHINLSDV 656
L + N +NL ++
Sbjct: 378 DLQMSNFVNLKNI 390
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 70.5 bits (165), Expect = 3e-11
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF + L L GF P+PIQ +P G D+L A++GTGKT + + ++
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 408 KLNLNNGLQ-------VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIX 566
L+ + + +IL PTRE+ Q+ D +KQ + H L + V GG S+
Sbjct: 64 MLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQY-AQHTELAIVTVYGGTSIRVQQE 122
Query: 567 XXXXXVHIVVGSPGRLKHLIVXNHINLSDVQL 662
V I++ +PGRL + +L+ +Q+
Sbjct: 123 QLAKGVDILIATPGRLLDHLFTKKTSLNQLQM 154
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,304,604
Number of Sequences: 1657284
Number of extensions: 10899858
Number of successful extensions: 28461
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 26433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27362
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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