Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_K23
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 111 4e-25
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 111 4e-25
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 99 3e-21
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 99 3e-21
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 92 3e-19
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 90 1e-18
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 89 2e-18
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 81 9e-16
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 81 9e-16
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 77 9e-15
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 77 9e-15
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 77 9e-15
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 75 5e-14
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 72 3e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 72 3e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 72 3e-13
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 70 2e-12
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 70 2e-12
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 68 5e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 67 1e-11
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 67 1e-11
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 67 1e-11
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 65 4e-11
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 64 6e-11
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 62 3e-10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 61 6e-10
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 61 6e-10
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 59 3e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 58 7e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 57 1e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 55 5e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 52 5e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 52 5e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 52 5e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 48 6e-06
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 37 0.015
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 36 0.020
U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated p... 31 0.56
EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like... 31 0.56
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 31 0.56
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 29 2.2
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 111 bits (267), Expect = 4e-25
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
R + + N TF S+++ + TL L +S F +PSP+Q +P+G G D+L++AKSGTG
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 375 KTVVFSIIALEKLNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV 551
KT+VFS++A+E L+ + +Q +I+TPTREI QI + ++++ G +GG +
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 552 N-EXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
I IV+G+PGR+ L+ +N+S V F
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFF 168
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 111 bits (267), Expect = 4e-25
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Frame = +3
Query: 195 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 374
R + + N TF S+++ + TL L +S F +PSP+Q +P+G G D+L++AKSGTG
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 375 KTVVFSIIALEKLNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV 551
KT+VFS++A+E L+ + +Q +I+TPTREI QI + ++++ G +GG +
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 552 N-EXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
I IV+G+PGR+ L+ +N+S V F
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFF 168
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 98.7 bits (235), Expect = 3e-21
Identities = 53/153 (34%), Positives = 90/153 (58%), Gaps = 1/153 (0%)
Frame = +3
Query: 210 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 389
Q+VE+ F M L E L G+ GF+KPS IQ + G D++ +A+SGTGKT F
Sbjct: 26 QVVES--FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF 83
Query: 390 SIIALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIX 566
S+ L++++ + +Q +++ PTRE+ QI V+ +G + +N+ +GG SV +
Sbjct: 84 SVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALG-EYLNVNILPCIGGTSVRDDQR 142
Query: 567 XXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+H+VVG+PGR+ +I N ++ S +++F
Sbjct: 143 KLEAGIHVVVGTPGRVGDMINRNALDTSRIKMF 175
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 98.7 bits (235), Expect = 3e-21
Identities = 53/153 (34%), Positives = 90/153 (58%), Gaps = 1/153 (0%)
Frame = +3
Query: 210 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 389
Q+VE+ F M L E L G+ GF+KPS IQ + G D++ +A+SGTGKT F
Sbjct: 26 QVVES--FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF 83
Query: 390 SIIALEKLNLNN-GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIX 566
S+ L++++ + +Q +++ PTRE+ QI V+ +G + +N+ +GG SV +
Sbjct: 84 SVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALG-EYLNVNILPCIGGTSVRDDQR 142
Query: 567 XXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+H+VVG+PGR+ +I N ++ S +++F
Sbjct: 143 KLEAGIHVVVGTPGRVGDMINRNALDTSRIKMF 175
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 92.3 bits (219), Expect = 3e-19
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 1/158 (0%)
Frame = +3
Query: 156 AVMSLPHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKC 335
A ++LP R +T DV + V F L L G+ G++KPSPIQ + +
Sbjct: 21 AGLNLPAKDRRF-KTADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALT 79
Query: 336 GFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIXXQICDVIKQIGSHHX 512
G D+L AK+GTGKT + I +EK+ +Q M++ PTRE+ Q + ++ S H
Sbjct: 80 GQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVEL-SKHI 138
Query: 513 GLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLI 626
L V GG + + I VH+V+ +PGR+ L+
Sbjct: 139 QLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLM 176
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 89.8 bits (213), Expect = 1e-18
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 1/146 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF M L E L G+ + GF+KPS IQ VP D++ +A+SGTGKT FSI L+
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
L+ Q +IL+PTRE+ QI V+ +G + + +GG ++ E I
Sbjct: 87 SLDTQVRETQALILSPTRELAVQIQKVVLALGD-YMNVQCHACIGGTNLGEDIRKLDYGQ 145
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQL 662
H+V G+PGR+ +I ++ ++L
Sbjct: 146 HVVSGTPGRVFDMIRRRNLRTRAIKL 171
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 89.4 bits (212), Expect = 2e-18
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 1/146 (0%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 407
TF M L E L G+ + GF+KPS IQ +P D++ +A+SGTGKT FSI L+
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 408 KLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXV 584
L+ Q +IL+PTRE+ QI V+ +G + + +GG ++ E I
Sbjct: 87 SLDTQVRETQALILSPTRELAVQIQKVVLALGD-YMNVQCHACIGGTNLGEDIRKLDYGQ 145
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQL 662
H+V G+PGR+ +I ++ ++L
Sbjct: 146 HVVSGTPGRVFDMIRRRNLRTRAIKL 171
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 80.6 bits (190), Expect = 9e-16
Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Frame = +3
Query: 282 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN--GLQVMILTPT 455
GF +P+PIQ +P G D++ +++G+GKT F I L+KL + G++ ++++PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 456 REIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXN 635
RE+ Q V+K++G GL ++GG + E I++ +PGRL H+IV
Sbjct: 103 RELALQTFKVVKELG-RFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEM 161
Query: 636 HINLSDVQ 659
+ LS VQ
Sbjct: 162 DLRLSYVQ 169
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 80.6 bits (190), Expect = 9e-16
Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Frame = +3
Query: 282 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN--GLQVMILTPT 455
GF +P+PIQ +P G D++ +++G+GKT F I L+KL + G++ ++++PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 456 REIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXN 635
RE+ Q V+K++G GL ++GG + E I++ +PGRL H+IV
Sbjct: 103 RELALQTFKVVKELG-RFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEM 161
Query: 636 HINLSDVQ 659
+ LS VQ
Sbjct: 162 DLRLSYVQ 169
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 77.4 bits (182), Expect = 9e-15
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F LL L + GF+ PS +Q +P G D++ +AKSG GKT VF I L++
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 411 LNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV-NEXIXXXXXXV 584
L +G + V+ + TRE+ QI ++ + G+ V GG+++ +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQLF 665
HIVVG+PGR+ L + L V+ F
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYF 189
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 77.4 bits (182), Expect = 9e-15
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F LL L + GF+ PS +Q +P G D++ +AKSG GKT VF I L++
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 411 LNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV-NEXIXXXXXXV 584
L +G + V+ + TRE+ QI ++ + G+ V GG+++ +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQLF 665
HIVVG+PGR+ L + L V+ F
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYF 189
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 77.4 bits (182), Expect = 9e-15
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F LL L + GF+ PS +Q +P G D++ +AKSG GKT VF I L++
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 411 LNLNNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSV-NEXIXXXXXXV 584
L +G + V+ + TRE+ QI ++ + G+ V GG+++ +
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 161
Query: 585 HIVVGSPGRLKHLIVXNHINLSDVQLF 665
HIVVG+PGR+ L + L V+ F
Sbjct: 162 HIVVGTPGRMLALARSGKLKLDKVKYF 188
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 74.9 bits (176), Expect = 5e-14
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Frame = +3
Query: 222 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 401
NV+F M LS L +G+ P+PIQ +P+ G D+ A +GTGKT F +
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 402 LEKLNLN----NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXX 569
LE++ + +V++L PTRE+ Q+ V +++ S L V GGL +
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKL-STFIQLEVCLCAGGLDLKAQEAA 265
Query: 570 XXXXVHIVVGSPGRL-KHLIVXNHINLSDVQLF 665
+VV +PGRL HL NLS++++F
Sbjct: 266 LRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVF 298
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.1 bits (169), Expect = 3e-13
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
+++ ++ + V I TF L+E + +G+ K +PIQ + +PL G+D++
Sbjct: 325 EVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMAC 384
Query: 357 AKSGTGKTVVFSIIALEKL----NLNNG------LQVMILTPTREIXXQICDVIKQIGSH 506
A++G+GKT F + + +L NLN + +ILTPTRE+ QI + ++ ++
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF-AY 443
Query: 507 HXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+ ++ V GGL+V I+VG+ GR+KH I L + F
Sbjct: 444 QTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 496
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.1 bits (169), Expect = 3e-13
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
+++ ++ + V I TF L+E + +G+ K +PIQ + +PL G+D++
Sbjct: 325 EVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMAC 384
Query: 357 AKSGTGKTVVFSIIALEKL----NLNNG------LQVMILTPTREIXXQICDVIKQIGSH 506
A++G+GKT F + + +L NLN + +ILTPTRE+ QI + ++ ++
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF-AY 443
Query: 507 HXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+ ++ V GGL+V I+VG+ GR+KH I L + F
Sbjct: 444 QTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 496
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 72.1 bits (169), Expect = 3e-13
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
+++ ++ + V I TF L+E + +G+ K +PIQ + +PL G+D++
Sbjct: 325 EVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMAC 384
Query: 357 AKSGTGKTVVFSIIALEKL----NLNNG------LQVMILTPTREIXXQICDVIKQIGSH 506
A++G+GKT F + + +L NLN + +ILTPTRE+ QI + ++ ++
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF-AY 443
Query: 507 HXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+ ++ V GGL+V I+VG+ GR+KH I L + F
Sbjct: 444 QTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 496
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Frame = +3
Query: 201 RDVQIVE-NVT---FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSG 368
+ +QI E N+T F+ + + + L + + +P+Q +P G D+L A++G
Sbjct: 77 KPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTG 136
Query: 369 TGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGL 545
TGKT+ F+I L+KL+++ G+ +ILTPTRE+ QI + +G L ++GG
Sbjct: 137 TGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGK-PITLKCSVIVGGR 195
Query: 546 SVNEXIXXXXXXVHIVVGSPGRLKHLI 626
S+ H+VV +PGRL LI
Sbjct: 196 SLIHQARELSERPHVVVATPGRLADLI 222
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Frame = +3
Query: 201 RDVQIVE-NVT---FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSG 368
+ +QI E N+T F+ + + + L + + +P+Q +P G D+L A++G
Sbjct: 77 KPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTG 136
Query: 369 TGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGL 545
TGKT+ F+I L+KL+++ G+ +ILTPTRE+ QI + +G L ++GG
Sbjct: 137 TGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGK-PITLKCSVIVGGR 195
Query: 546 SVNEXIXXXXXXVHIVVGSPGRLKHLI 626
S+ H+VV +PGRL LI
Sbjct: 196 SLIHQARELSERPHVVVATPGRLADLI 222
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 68.1 bits (159), Expect = 5e-12
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 407
F LS TL GL + + KP+ IQ + G D++ AK+G+GKT+ I LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 408 ----KLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXX 575
K + + GL +I++PTRE+ Q I +G+HH G + V+GG V
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHH-GFSCGLVIGGSDV-AFERNRI 195
Query: 576 XXVHIVVGSPGRL 614
++I+V +PGRL
Sbjct: 196 SGINIIVCTPGRL 208
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 66.9 bits (156), Expect = 1e-11
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
+++ ++ + V + TF+ L E + +G+ K +PIQ + +PL G D++
Sbjct: 536 EVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMAC 595
Query: 357 AKSGTGKTVVFSIIALEKLNLNNGL----------QVMILTPTREIXXQICDVIKQIGSH 506
A++G+GKT F + + +L N L + +ILTPTRE+ QI + ++ ++
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF-AY 654
Query: 507 HXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+ + V GGL+V I+VG+ GR+KH I L + F
Sbjct: 655 QTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 707
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 66.9 bits (156), Expect = 1e-11
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
+++ ++ + V + TF+ L E + +G+ K +PIQ + +PL G D++
Sbjct: 536 EVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMAC 595
Query: 357 AKSGTGKTVVFSIIALEKLNLNNGL----------QVMILTPTREIXXQICDVIKQIGSH 506
A++G+GKT F + + +L N L + +ILTPTRE+ QI + ++ ++
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF-AY 654
Query: 507 HXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+ + V GGL+V I+VG+ GR+KH I L + F
Sbjct: 655 QTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 707
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 66.9 bits (156), Expect = 1e-11
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
+++ ++ + V + TF+ L E + +G+ K +PIQ + +PL G D++
Sbjct: 536 EVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMAC 595
Query: 357 AKSGTGKTVVFSIIALEKLNLNNGL----------QVMILTPTREIXXQICDVIKQIGSH 506
A++G+GKT F + + +L N L + +ILTPTRE+ QI + ++ ++
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF-AY 654
Query: 507 HXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDVQLF 665
+ + V GGL+V I+VG+ GR+KH I L + F
Sbjct: 655 QTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 707
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 65.3 bits (152), Expect = 4e-11
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Frame = +3
Query: 204 DVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 383
D + V+ +F + +S+ G+ KPS IQ +P G D++ A++G+GKT
Sbjct: 37 DEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTG 96
Query: 384 VFSIIALEK-LNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEX 560
F+I L+ L+ ++LTPTRE+ QI + +GS GL ++GG+ +
Sbjct: 97 AFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGS-GIGLIAAVIVGGVDMAAQ 155
Query: 561 IXXXXXXVHIVVGSPGRL-KHLIVXNHINL 647
HI+V +PGRL HL NL
Sbjct: 156 AMALARRPHIIVATPGRLVDHLENTKGFNL 185
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 64.5 bits (150), Expect = 6e-11
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Frame = +3
Query: 270 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL------NLNNGL 431
L+ FQKP+ IQ P+ G D++ AK+G+GKT+ F + AL + G
Sbjct: 144 LLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGP 203
Query: 432 QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGR 611
V++L PTRE+ Q+ +V H GL + + GG S V IVV +PGR
Sbjct: 204 AVLVLLPTRELAQQVQEVSIDF-CHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGR 262
Query: 612 L 614
L
Sbjct: 263 L 263
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 62.1 bits (144), Expect = 3e-10
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Frame = +3
Query: 174 HDIRNSTRTRDVQIVENVTFTSM--LLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDL 347
H S+ T+ + + TF S+ ++ L + GF + IQ + G D+
Sbjct: 49 HQTEESSETKVSEFLTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDV 108
Query: 348 LLEAKSGTGKTVVFSIIALE---KLN--LNNGLQVMILTPTREIXXQICDVIKQIGSHHX 512
L AK+G+GKT+ F + A+E KLN +NG V+I++PTRE+ Q V+ ++
Sbjct: 109 LASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSEL-LEGS 167
Query: 513 GLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRL 614
L VMGG + + V I+V +PGRL
Sbjct: 168 NLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRL 201
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 61.3 bits (142), Expect = 6e-10
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Frame = +3
Query: 279 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGLQ---- 434
+G+ + +PIQ + +PL G D+L A++G+GKT F + + +L +LN G +
Sbjct: 316 AGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCY 375
Query: 435 --VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPG 608
+ILTPTRE+ QI + ++ S+ + ++ V GG++V I+VG+ G
Sbjct: 376 PRCIILTPTRELADQIYNEGRKF-SYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIG 434
Query: 609 RLKHLIVXNHINL 647
R+KH I L
Sbjct: 435 RVKHFCEDGAIKL 447
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 61.3 bits (142), Expect = 6e-10
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Frame = +3
Query: 279 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGLQ---- 434
+G+ + +PIQ + +PL G D+L A++G+GKT F + + +L +LN G +
Sbjct: 316 AGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCY 375
Query: 435 --VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPG 608
+ILTPTRE+ QI + ++ S+ + ++ V GG++V I+VG+ G
Sbjct: 376 PRCIILTPTRELADQIYNEGRKF-SYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIG 434
Query: 609 RLKHLIVXNHINL 647
R+KH I L
Sbjct: 435 RVKHFCEDGAIKL 447
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 58.8 bits (136), Expect = 3e-09
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLI-SSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 404
+F S ++ G I +GF+KPSPIQ PL G D + +++G+GKT+ F + AL
Sbjct: 84 SFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPAL 143
Query: 405 EKLNL-------NNGLQ-----VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLS 548
++ N+ Q V++L+PTRE+ QI +K+ + G + GG S
Sbjct: 144 LHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGS 201
Query: 549 VNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINLSDV 656
E + V IV+ +PGRL L I+L+ V
Sbjct: 202 RPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASV 237
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 57.6 bits (133), Expect = 7e-09
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Frame = +3
Query: 282 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALE-KLNL----NNGLQ 434
G P+ IQ+ G+P+ G D++ A +G+GKT+ F + LE ++ L + G
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 435 VMILTPTREIXXQICDVIKQI--GSHHXGL---NVEXVMGGLSVNEXIXXXXXXVHIVVG 599
+I+ P+RE+ QI D+I ++ GL +GG+ + E +HIVV
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVA 328
Query: 600 SPGRLKHLIVXNHINL 647
+PGRL ++ INL
Sbjct: 329 TPGRLSDMLTKKIINL 344
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 57.2 bits (132), Expect = 1e-08
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Frame = +3
Query: 285 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF------SIIALEKLNLNNGLQVMIL 446
+ KP+ IQ +P G D++ AK+G+GKT+ F I+ +L +G +IL
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVIL 383
Query: 447 TPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLI 626
PTRE+ Q + + GL V GG+ ++E I IVV +PGR+ ++
Sbjct: 384 APTRELAMQTYKEANKF-AKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVL 442
Query: 627 VXN 635
N
Sbjct: 443 AAN 445
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 56.4 bits (130), Expect = 2e-08
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Frame = +3
Query: 282 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS------IIALEKLNLNN----GL 431
G+ +P+PIQ +P+G D++ A++G+GKT F I +L K+ G
Sbjct: 320 GYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGP 379
Query: 432 QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGR 611
+I+ PTRE+ QI + + G G+ V+GG S + V +V+ +PGR
Sbjct: 380 YAIIMAPTRELAQQIEEETNKFGK-LLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGR 438
Query: 612 LKHLIVXNHINLS 650
L ++ ++ L+
Sbjct: 439 LLDVLENRYLLLN 451
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 54.8 bits (126), Expect = 5e-08
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +3
Query: 240 MLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL 419
M L E L G+ GF+KPS IQ V G D+ +++++G+GKTV+ I L+ ++
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 420 NNG-LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXXXVHIVV 596
+ LQV++L P R + + + +K +G + LNV G + H+++
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRN---LNVNATCLGF---DTTAENDKISHVLM 114
Query: 597 GSP 605
G+P
Sbjct: 115 GTP 117
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPL--GKCGFDLLLEAKSGTGKTVVFSIIA 401
+F + L L L + FQ P+ IQ +PL + +L+ +A+SGTGKT F +
Sbjct: 210 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 269
Query: 402 LEKLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
L ++++N Q + L PT E+ QI +V++++G L + + G ++ +
Sbjct: 270 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM-AAMRGRKL 328
Query: 579 XVHIVVGSPG 608
IV+G+PG
Sbjct: 329 TEQIVIGTPG 338
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPL--GKCGFDLLLEAKSGTGKTVVFSIIA 401
+F + L L L + FQ P+ IQ +PL + +L+ +A+SGTGKT F +
Sbjct: 235 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 294
Query: 402 LEKLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
L ++++N Q + L PT E+ QI +V++++G L + + G ++ +
Sbjct: 295 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM-AAMRGRKL 353
Query: 579 XVHIVVGSPG 608
IV+G+PG
Sbjct: 354 TEQIVIGTPG 363
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPL--GKCGFDLLLEAKSGTGKTVVFSIIA 401
+F + L L L + FQ P+ IQ +PL + +L+ +A+SGTGKT F +
Sbjct: 619 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 678
Query: 402 LEKLNLNNGL-QVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXXXXX 578
L ++++N Q + L PT E+ QI +V++++G L + + G ++ +
Sbjct: 679 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM-AAMRGRKL 737
Query: 579 XVHIVVGSPG 608
IV+G+PG
Sbjct: 738 TEQIVIGTPG 747
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Frame = +3
Query: 342 DLLLEAKSGTGKTVVFSIIALEKLNLNNGLQ-----VMILTPTREIXXQICDVIKQIGSH 506
D+++E+ +G+GKT+ F ++ + ++ N LQ +IL+P+RE+ QI VI+ +
Sbjct: 48 DVVVESPTGSGKTLAF-VLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPF-AE 105
Query: 507 HXGLNVEXVMGGLSVNEXI-XXXXXXVHIVVGSPGRLKHLI 626
L VE V GG V++ I V+I+V +PGRL +I
Sbjct: 106 KLNLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQII 146
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 51.6 bits (118), Expect = 5e-07
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Frame = +3
Query: 279 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----------NLNN 425
SG+ KP+P+Q H +P DL+ A++G+GKT F + ++ + N
Sbjct: 157 SGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTN 216
Query: 426 GLQ-----VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGL-SVNEXIXXXXXXVH 587
G + ++L+PTRE+ QI + S+ + + GG + + + H
Sbjct: 217 GRRTYYPCALVLSPTRELAIQIHKEATKF-SYKSNIQTAILYGGRENYRDQVNRLRAGTH 275
Query: 588 IVVGSPGRLKHLIVXNHINLS 650
I++ +PGRL +I I L+
Sbjct: 276 ILIATPGRLIDIIEQGFIGLA 296
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 51.6 bits (118), Expect = 5e-07
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Frame = +3
Query: 279 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----------NLNN 425
SG+ KP+P+Q H +P DL+ A++G+GKT F + ++ + N
Sbjct: 141 SGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTN 200
Query: 426 GLQ-----VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGL-SVNEXIXXXXXXVH 587
G + ++L+PTRE+ QI + S+ + + GG + + + H
Sbjct: 201 GRRTYYPCALVLSPTRELAIQIHKEATKF-SYKSNIQTAILYGGRENYRDQVNRLRAGTH 259
Query: 588 IVVGSPGRLKHLIVXNHINLS 650
I++ +PGRL +I I L+
Sbjct: 260 ILIATPGRLIDIIEQGFIGLA 280
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 51.6 bits (118), Expect = 5e-07
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Frame = +3
Query: 279 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----------NLNN 425
SG+ KP+P+Q H +P DL+ A++G+GKT F + ++ + N
Sbjct: 138 SGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTN 197
Query: 426 GLQ-----VMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGL-SVNEXIXXXXXXVH 587
G + ++L+PTRE+ QI + S+ + + GG + + + H
Sbjct: 198 GRRTYYPCALVLSPTRELAIQIHKEATKF-SYKSNIQTAILYGGRENYRDQVNRLRAGTH 256
Query: 588 IVVGSPGRLKHLIVXNHINLS 650
I++ +PGRL +I I L+
Sbjct: 257 ILIATPGRLIDIIEQGFIGLA 277
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 48.0 bits (109), Expect = 6e-06
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 19/147 (12%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+ + L E+ + ++G+ +P+P+Q + +P + G DL+ A++G+GKT F ++ L
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAF-LVPLVN 226
Query: 411 LNLNNG------------------LQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVM 536
L +G ++L+PTRE+ QI + ++ ++ + +
Sbjct: 227 AILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF-AYRTPITSALLY 285
Query: 537 GGL-SVNEXIXXXXXXVHIVVGSPGRL 614
GG + + I HI++ +PGRL
Sbjct: 286 GGRENYKDQIHKLRLGCHILIATPGRL 312
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 47.6 bits (108), Expect = 8e-06
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Frame = +3
Query: 228 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF------ 389
+F + + + S +++P+PIQ +P G D+L AK+G+GKT +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 390 SIIALEKLNLNNGLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLSVNEXIXX 569
I+ L G +I+ PTRE+ Q+ K+ + + GG +
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNEL 385
Query: 570 XXXXVHIVVGSPGRLKHLI 626
+VV +PGR+ L+
Sbjct: 386 QNEGAEMVVCTPGRIIDLV 404
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Frame = +3
Query: 231 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 410
F+ +S L L + ++PSPIQ+ +P ++L A +G+GKT+ F++ +++
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 411 L-----------NLNNGLQVMILTPTREIXXQ 473
+ + ++ L ++L PTRE+ Q
Sbjct: 188 ILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.1 bits (87), Expect = 0.003
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Frame = +3
Query: 261 LXGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---- 425
L + GF +P+ IQ +P + D+L A++G+GKT+ F I + +L ++
Sbjct: 167 LEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQ 226
Query: 426 --------GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLS-VNEXIXXXXX 578
G + +I+ PTRE+ QI I + S L ++GGL+ V +
Sbjct: 227 ETESTEVRGPRALIVAPTRELVIQIMKHINALIS-TTQLIATSIVGGLAQVKQERIISQQ 285
Query: 579 XVHIVVGSPGRL 614
IVV +PGRL
Sbjct: 286 RPDIVVATPGRL 297
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 36.7 bits (81), Expect = 0.015
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 11/168 (6%)
Frame = +3
Query: 177 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 356
+IRN+ + DV++ ++T+ L L L + IQ +P G D+L +
Sbjct: 370 EIRNAEK--DVRLT---SWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQ 424
Query: 357 AKSGTGKTVVFSIIALEKL-----------NLNNGLQVMILTPTREIXXQICDVIKQIGS 503
A++ GKT F + ++K+ ++G +IL PTRE+ QI + ++
Sbjct: 425 AETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTY-C 483
Query: 504 HHXGLNVEXVMGGLSVNEXIXXXXXXVHIVVGSPGRLKHLIVXNHINL 647
+ + V G + I++G+ GR+ V +HI+L
Sbjct: 484 QNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCGRIMDFTVKSHISL 531
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 36.3 bits (80), Expect = 0.020
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Frame = +3
Query: 285 FQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN------------ 425
F +P+ IQ +P + D+L A++G+GKT+ F I + +L ++
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 426 GLQVMILTPTREIXXQICDVIKQIGSHHXGLNVEXVMGGLS-VNEXIXXXXXXVHIVVGS 602
G + +I+ PTRE+ QI I + S L ++GGL+ V + IVV +
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALIS-TTQLIATSIVGGLAQVKQERIISQQRPDIVVAT 126
Query: 603 PGRL 614
PGRL
Sbjct: 127 PGRL 130
>U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated
protein 1 protein.
Length = 285
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 384 VFSIIALEKLNLNNGLQVMILTPT---REIXXQICDVIKQIGSHHXGLNVEXV 533
++S L + L N L + LT RE Q+C+ I G+ H G+ VE V
Sbjct: 141 IYSTKLLAQTTLRNALGMKTLTEMLTEREAIAQLCETILDEGTEHWGVKVERV 193
>EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like
protein UNC-1 protein.
Length = 289
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 384 VFSIIALEKLNLNNGLQVMILTPT---REIXXQICDVIKQIGSHHXGLNVEXV 533
++S L + L N L + LT RE Q+C+ I G+ H G+ VE V
Sbjct: 145 IYSTKLLAQTTLRNALGMKTLTEMLTEREAIAQLCETILDEGTEHWGVKVERV 197
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 31.5 bits (68), Expect = 0.56
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +3
Query: 399 ALEKLNLNNGLQV-MILTPTREIXXQICDVIKQIGSHHXGLNVEXVM--GGLSVNEXIXX 569
A E+L++++ + +IL PTRE+ Q I+ S + V G ++N+ +
Sbjct: 271 AAEQLSIDSSTPLCVILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRT 330
Query: 570 XXXXVHIVVGSPGRLKHLIVXNHINLSDVQ 659
IVVG+P R+ LI + ++Q
Sbjct: 331 LETGCDIVVGTPSRVFDLIHTGKLATKNLQ 360
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 270 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 395
L S + P+ +Q +P G D L+ A++G+GKT FS+
Sbjct: 17 LSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSL 58
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 306 QLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA-LEKLNLNN 425
+LH +P +CG L L +G GK+ I+A +K NL N
Sbjct: 104 KLHRLPTPRCGEVLGLVGTNGIGKSTALKILAGKQKPNLGN 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,672,938
Number of Sequences: 27780
Number of extensions: 274408
Number of successful extensions: 780
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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