Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_K21
(506 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 117 9e-28
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 66 2e-12
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 55 7e-09
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 45 6e-06
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 40 2e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 3e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 38 9e-04
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 38 9e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 37 0.002
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 36 0.005
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 35 0.006
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 33 0.019
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 29 0.53
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 2.8
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 26 3.7
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 3.7
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 4.9
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 6.5
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 25 8.6
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 8.6
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 8.6
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 117 bits (282), Expect = 9e-28
Identities = 57/93 (61%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Frame = +1
Query: 214 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 390
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 391 LLSFWRGNFANVIRYFPTQALNFAFKDKYXQVF 489
++S WRGN ANV+RYFPTQALNFAFKDK+ ++F
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFAFKDKFKKMF 119
Score = 36.7 bits (81), Expect = 0.002
Identities = 23/95 (24%), Positives = 42/95 (44%)
Frame = +1
Query: 214 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 393
FA + +GG + A S V ++ + L S + ++++ G+VD + + + GL
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191
Query: 394 LSFWRGNFANVIRYFPTQALNFAFKDKYXQVFLGG 498
+RG +V+ + L F D V L G
Sbjct: 192 RGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG 226
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 66.5 bits (155), Expect = 2e-12
Identities = 32/78 (41%), Positives = 51/78 (65%)
Frame = +1
Query: 229 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 408
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+R
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77
Query: 409 GNFANVIRYFPTQALNFA 462
GN N +R FP A+ FA
Sbjct: 78 GNGTNCLRAFPYGAVQFA 95
Score = 43.6 bits (98), Expect = 2e-05
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +1
Query: 184 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 363
K + AD AF K FL GG + + +T P + ++ QV + YK I A
Sbjct: 217 KFFSNADLTAFQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSA 272
Query: 364 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 459
I K +G+ F+RG +N+++ P ++ +
Sbjct: 273 IFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 54.8 bits (126), Expect = 7e-09
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = +1
Query: 220 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 399
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 400 FWRGNFANVIRYFPTQALNFAFKDKYXQVFL 492
++G+ A + R FP + F ++ +V +
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVRRVLI 108
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 45.2 bits (102), Expect = 6e-06
Identities = 23/86 (26%), Positives = 45/86 (52%)
Frame = +1
Query: 202 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 381
DP F++GGI+ VS+T AP++R+K++L + + + + ++ +
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWN 181
Query: 382 EQGLLSFWRGNFANVIRYFPTQALNF 459
G+ SF+ GN NV++ P ++ F
Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKF 207
Score = 41.1 bits (92), Expect = 9e-05
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 235 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 414
G +S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 415 FANVIRYFPTQALNF 459
N+++ P+ A+++
Sbjct: 399 SPNLLKVAPSVAISY 413
Score = 35.9 bits (79), Expect = 0.003
Identities = 20/91 (21%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 226 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSF 402
+LAGG++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287
Query: 403 WRGNFANVIRYFPTQALNFAFKDKYXQVFLG 495
+RG ++ FP A + + + ++G
Sbjct: 288 YRGVLVGILGMFPYSATDLGTFEGLKRTWIG 318
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +1
Query: 229 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 408
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 409 GNFANVIRYFPTQALNFA 462
G ++ P A+++A
Sbjct: 268 GIRPRMVVAMPATAVSWA 285
Score = 37.9 bits (84), Expect = 9e-04
Identities = 20/79 (25%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 229 LAGGISAAVSKTAVAPIERVKLLLQVQH-VSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 405
LAG S + + + P++ +K +Q+ + VS+ ++ + IV++ ++I +G+ S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 406 RGNFANVIRYFPTQALNFA 462
RG + ++ P+ A+ F+
Sbjct: 79 RGISSVIMGAGPSHAIYFS 97
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 39.5 bits (88), Expect = 3e-04
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +1
Query: 202 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 381
D + F F AG ++ + P++ VK +Q+ V K Y G D +I K
Sbjct: 4 DNIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVK 57
Query: 382 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYXQVF 489
+G +RG ++ P +AL FA D Y +++
Sbjct: 58 NEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93
Score = 33.9 bits (74), Expect = 0.014
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 217 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGL 393
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++ +
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERI 157
Query: 394 LSFWRGNFANVIRY 435
L+ + G A + R+
Sbjct: 158 LALYNGFEATMWRH 171
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 37.9 bits (84), Expect = 9e-04
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 211 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 387
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 388 GLLSFWRG 411
GL +F++G
Sbjct: 70 GLAAFYKG 77
Score = 34.7 bits (76), Expect = 0.008
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 205 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 384
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 385 QGLLSFWRG 411
GL +G
Sbjct: 164 YGLSGIMKG 172
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 37.9 bits (84), Expect = 9e-04
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +1
Query: 226 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 405
FL G ++ ++ PI+ VK +Q ++A + YK + +I + GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFW 260
Query: 406 RGNFANVIRYFPTQALNFAFKDKYXQV 486
G + R + + F +K ++
Sbjct: 261 SGATPRLARLILSGGIVFTVYEKVMEI 287
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 36.7 bits (81), Expect = 0.002
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 226 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 402
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGL 86
Query: 403 WRG 411
RG
Sbjct: 87 QRG 89
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 35.5 bits (78), Expect = 0.005
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Frame = +1
Query: 163 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS----KQIA 330
V +T +N SN P + F+AGG++ + A AP++ VK LQ KQ A
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTA 90
Query: 331 ADQ-----RYKGIVDAFV---RIPKEQGLLSFWRGNFANVIRYFPTQALNF 459
+ Y+ +D + + +G + +RG N+I P +++NF
Sbjct: 91 KSKSPLTAAYRHFMDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINF 141
Score = 30.3 bits (65), Expect = 0.17
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 238 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 417
GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ + G
Sbjct: 280 GIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLT 336
Query: 418 ANVIRYFPTQALNF 459
A+++R P + F
Sbjct: 337 AHLLRVVPNACILF 350
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 35.1 bits (77), Expect = 0.006
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +1
Query: 220 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR---YKGIVDAFVRIPKEQG 390
KD +AGG + S VAP++ VK Q Q + G + + I +G
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66
Query: 391 LLSFWRGNFANVIRYFPTQALNFAFKDKYXQVF 489
+ +RG ++ Y P+ ++ F +K +F
Sbjct: 67 IAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF 99
Score = 28.7 bits (61), Expect = 0.53
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 328 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 426
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 33.5 bits (73), Expect = 0.019
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = +1
Query: 229 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 408
LAGGIS+ + + +AP + +K+ +Q+ S + F +++G+ + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 409 GNFANVIRYFPTQALNF 459
GN + Y A F
Sbjct: 70 GNVVAELLYLVYGAAEF 86
Score = 28.7 bits (61), Expect = 0.53
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 229 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 408
L+G I+ A SK + P++ V LQ YK D F+ I + G+ +R
Sbjct: 197 LSGVIAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYR 248
Query: 409 GNFANVIRYFP 441
G ++++ P
Sbjct: 249 GLSVSMLKVAP 259
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 28.7 bits (61), Expect = 0.53
Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 6/101 (5%)
Frame = +1
Query: 220 KDFLAGGISAAVSKT--AVAPIERVKLLLQVQHVSK-QIAADQRYKGIVDAFVRIPKEQG 390
KD L GG + V K P + +QV K + A K + D + G
Sbjct: 167 KDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSG 226
Query: 391 LLSFWRGNFANVIRYFP---TQALNFAFKDKYXQVFLGGVD 504
+ FW G F + + F AL VF G+D
Sbjct: 227 AVKFWNGKFFTLSQSFKLHLADALCLGVSANGDMVFSSGID 267
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 63 YEITPNLLFKNQELVFRDPPSACAATPTSTY 155
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 3.7
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +1
Query: 229 LAGGISAAVSKTAVAPIERVKLLLQV--QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 402
+AG + +S T V+PIE + +Q H A + + + D + ++G+L+
Sbjct: 141 IAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANE-VFDGLKLMIHQKGILNL 199
Query: 403 WRGNFANVIRYFPTQALNFAFKDKYXQVFLG 495
W G + R P A + ++ LG
Sbjct: 200 WSGVSVTLWRDVPFSAFYWWSYERIRLFLLG 230
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 3.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 368 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 261
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 4.9
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 352 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 444
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 6.5
Identities = 19/84 (22%), Positives = 33/84 (39%)
Frame = +1
Query: 184 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 363
K L P + L G ++ + +A+ P++ +K QV Y G +
Sbjct: 13 KTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVN--------PNIYPGNIAG 64
Query: 364 FVRIPKEQGLLSFWRGNFANVIRY 435
F I ++GL + G +I Y
Sbjct: 65 FKTILSKEGLRGLYTGGMPTLIGY 88
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 24.6 bits (51), Expect = 8.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 75 PNLLFKNQELVFRDPPSACAATPT 146
P + K E + RDPP A PT
Sbjct: 4 PKRIIKEIETLTRDPPPGIVAAPT 27
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 24.6 bits (51), Expect = 8.6
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 304 VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF-AFKDKYX 480
V + K D+RY GI F+ + KE + A+ IR L+F + + +Y
Sbjct: 80 VDCILKDEEYDKRYPGIHIVFLDMVKEPLINKLRTSRIASKIRTVQVAYLDFTSLESRYF 139
Query: 481 QV 486
QV
Sbjct: 140 QV 141
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 24.6 bits (51), Expect = 8.6
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 43 TLC--APVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHIHLV 165
T+C AP + L ++C+K+ C + PR PR+ HL+
Sbjct: 551 TICNIAPFVENLSFVTCAKLMQLCSSLSSPRFLFRNPRN-HLL 592
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,876,683
Number of Sequences: 5004
Number of extensions: 36054
Number of successful extensions: 137
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 202220600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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