Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_K09
         (467 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.     111   1e-24
BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25 p...   111   1e-24
BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25 p...   111   1e-24
BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25 p...   111   1e-24
AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25 p...   111   1e-24
AK097034-1|BAC04932.1|  120|Homo sapiens protein ( Homo sapiens ...    31   2.6  
BC028615-1|AAH28615.1|  408|Homo sapiens solute carrier family 3...    29   8.0  

>M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.
          Length = 125

 Score =  111 bits (267), Expect = 1e-24
 Identities = 57/77 (74%), Positives = 60/77 (77%)
 Frame = -3

Query: 336 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 157
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 156 HGQVXYTRATKGDDPVA 106
             QV YTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  111 bits (267), Expect = 1e-24
 Identities = 57/77 (74%), Positives = 60/77 (77%)
 Frame = -3

Query: 336 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 157
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 156 HGQVXYTRATKGDDPVA 106
             QV YTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  111 bits (267), Expect = 1e-24
 Identities = 57/77 (74%), Positives = 60/77 (77%)
 Frame = -3

Query: 336 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 157
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 156 HGQVXYTRATKGDDPVA 106
             QV YTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  111 bits (267), Expect = 1e-24
 Identities = 57/77 (74%), Positives = 60/77 (77%)
 Frame = -3

Query: 336 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 157
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 156 HGQVXYTRATKGDDPVA 106
             QV YTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  111 bits (267), Expect = 1e-24
 Identities = 57/77 (74%), Positives = 60/77 (77%)
 Frame = -3

Query: 336 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 157
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 156 HGQVXYTRATKGDDPVA 106
             QV YTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>AK097034-1|BAC04932.1|  120|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39715 fis, clone SMINT2013228. ).
          Length = 120

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 276 VGLPCTVSHTWVYQTTPGCSTCH 344
           +GL  T +HTW Y+  P CS C+
Sbjct: 20  LGLLHTHTHTWYYRCEPTCSACY 42


>BC028615-1|AAH28615.1|  408|Homo sapiens solute carrier family 35,
           member F1 protein.
          Length = 408

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
 Frame = +2

Query: 152 PWCWTTCLMRP------FSLSS-MSALLAREPRT-FNLSDTTAGVISLYCGTSLYSFSYV 307
           PW W   L+        F L S M  ++ +   T  NLS  TA + SL+CG  L+ + + 
Sbjct: 277 PWDWQIGLLYVGFSACMFGLYSFMQVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFS 336

Query: 308 GL 313
           GL
Sbjct: 337 GL 338


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,710,085
Number of Sequences: 237096
Number of extensions: 1468805
Number of successful extensions: 3196
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3194
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)