Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_K06
         (374 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   2.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   2.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   2.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   8.3  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    20   8.3  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 73  QICPQEQQFFFLLVLSCLR 17
           ++CPQE+  F LL+   LR
Sbjct: 264 KLCPQEEACFRLLMNDILR 282


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 73  QICPQEQQFFFLLVLSCLR 17
           ++CPQE+  F LL+   LR
Sbjct: 179 KLCPQEEACFRLLMNDILR 197


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 73  QICPQEQQFFFLLVLSCLR 17
           ++CPQE+  F LL+   LR
Sbjct: 498 KLCPQEEACFRLLMNDILR 516


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = -3

Query: 108 SFCCWC 91
           S CCWC
Sbjct: 10  SCCCWC 15


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 4   NATYNVNNSEPAKKKTVV 57
           +  YN +N+E  + KT+V
Sbjct: 80  DVVYNASNNELVRTKTLV 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.132    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,884
Number of Sequences: 438
Number of extensions: 857
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)