Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_K05
(627 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 145 5e-36
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 58 1e-09
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 54 2e-08
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 48 8e-07
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 48 1e-06
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 45 8e-06
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 44 2e-05
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 38 0.001
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 36 0.004
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 29 0.42
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 27 2.9
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 26 5.1
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 25 6.8
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 25 9.0
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 145 bits (351), Expect = 5e-36
Identities = 71/121 (58%), Positives = 89/121 (73%)
Frame = +3
Query: 264 LGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFXNIGAKLVQNVANNTNXEAGDGTT 443
LGPKG NV+++Q +GSPKITKDGVTVA+ V LKDKF N+GA+LVQ+VA+ TN AGDGTT
Sbjct: 62 LGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAGDGTT 121
Query: 444 TATVLARAIAKEGFEKISKGANPIXIXXGVMLAVHAVKXKLKGMSKPVTTPEXIAQVATI 623
TATVL RAI E ++ G NP+ + G+ LAV V L+ + +TT E I+QVATI
Sbjct: 122 TATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQANKRDITTSEEISQVATI 181
Query: 624 S 626
S
Sbjct: 182 S 182
Score = 46.8 bits (106), Expect = 3e-06
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +2
Query: 170 RFYAKDVRFGADVRALMLQGVDILADAVAVTTGSK 274
R YAKD++FG D RA +L GVD LA AV+VT G K
Sbjct: 31 RTYAKDLKFGVDARASLLTGVDTLARAVSVTLGPK 65
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 57.6 bits (133), Expect = 1e-09
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +3
Query: 264 LGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFXNIGAKLVQNVANNTNXEAGDGTT 443
LGP+G + IL G +T DG T+ +E++ + AKL+ ++ + + E GDGTT
Sbjct: 54 LGPRGLDKILISPDGEITVTNDGATILDQMEVEHQI----AKLLVQLSKSQDDEIGDGTT 109
Query: 444 TATVLARAIAKEGFEKISKGANPIXIXXGVMLAVHAVKXKLKGMSKPVT-TPE 599
VLA A+ ++ I KG +PI I G A L +S V +PE
Sbjct: 110 GVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPE 162
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 53.6 bits (123), Expect = 2e-08
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 264 LGPKGXNVILEQ-SWGSPKITKDGVTVAKGVELKDKFXNIGAKLVQNVANNTNXEAGDGT 440
LGPKG + IL+ S G +T DG T+ K + L N AK++ N++ + E GDGT
Sbjct: 40 LGPKGMDKILQSNSSGDIVVTNDGATILKSIALD----NAAAKVLVNISKVQDDEVGDGT 95
Query: 441 TTATVLARAIAKEGFEKISKGANPIXIXXGVMLAVHAVKXKLKGMS 578
T+ V A + ++ ++ +P I G +A L+ S
Sbjct: 96 TSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRASS 141
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 48.4 bits (110), Expect = 8e-07
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 264 LGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFXNIGAKLVQNVANNTNXEAGDGTT 443
LGP G + +L G +T DG T+ + L D G LV+ +A + E GDGTT
Sbjct: 41 LGPVGLDKMLVDDIGDVTVTNDGATI---LSLLDVEHPAGKVLVE-LAQQQDKEVGDGTT 96
Query: 444 TATVLARAIAKEGFEKISKGANPIXIXXGVMLAV-HAVK 557
+ ++A + + E + +P I G LA+ AVK
Sbjct: 97 SVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVK 135
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 47.6 bits (108), Expect = 1e-06
Identities = 26/86 (30%), Positives = 48/86 (55%)
Frame = +3
Query: 264 LGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFXNIGAKLVQNVANNTNXEAGDGTT 443
LGPKG + +++ G +T DG T+ K + + + AK++ +++ + EAGDGTT
Sbjct: 39 LGPKGMDKMIQTGKGEVILTNDGATILKHLSV----LHPAAKMLVDLSAAQDVEAGDGTT 94
Query: 444 TATVLARAIAKEGFEKISKGANPIXI 521
+ +LA ++ + + KG +P I
Sbjct: 95 SVVILAGSMLACAEKLLKKGIHPTVI 120
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 45.2 bits (102), Expect = 8e-06
Identities = 28/102 (27%), Positives = 47/102 (46%)
Frame = +3
Query: 264 LGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFXNIGAKLVQNVANNTNXEAGDGTT 443
LGP G + ++ G I+ DG T+ K +++ + AK + ++A + E GDGTT
Sbjct: 44 LGPLGADKLMVDDRGEVVISNDGATIMKLLDI----VHPAAKTLVDIARAQDAEVGDGTT 99
Query: 444 TATVLARAIAKEGFEKISKGANPIXIXXGVMLAVHAVKXKLK 569
+ V A + +E + G + I G A K+K
Sbjct: 100 SVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIK 141
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 44.0 bits (99), Expect = 2e-05
Identities = 28/93 (30%), Positives = 44/93 (47%)
Frame = +3
Query: 264 LGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFXNIGAKLVQNVANNTNXEAGDGTT 443
LGP G +L G+ K+TKDG + ++++ N A + A + GDGTT
Sbjct: 36 LGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQ----NPTASCIAKAATAQDDATGDGTT 91
Query: 444 TATVLARAIAKEGFEKISKGANPIXIXXGVMLA 542
+ +L + K+ I +G +P I G LA
Sbjct: 92 SVCLLVGELLKQAELYIREGLHPSLISDGFNLA 124
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 37.9 bits (84), Expect = 0.001
Identities = 26/112 (23%), Positives = 48/112 (42%)
Frame = +3
Query: 264 LGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFXNIGAKLVQNVANNTNXEAGDGTT 443
LGP+ +L GS +T DG + + +E+ AK + +A + E GDGTT
Sbjct: 39 LGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP----AAKSMIELARTQDEEVGDGTT 94
Query: 444 TATVLARAIAKEGFEKISKGANPIXIXXGVMLAVHAVKXKLKGMSKPVTTPE 599
+ +LA I + + +P+ + A+ + ++ PV +
Sbjct: 95 SVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVNVDD 146
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 36.3 bits (80), Expect = 0.004
Identities = 24/94 (25%), Positives = 37/94 (39%)
Frame = +3
Query: 264 LGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFXNIGAKLVQNVANNTNXEAGDGTT 443
LGP G N I+ +T D T+ + +E+ + AKLV + E GD
Sbjct: 46 LGPNGKNKIVVNHLQQTFLTNDAATIIRELEV----IHPAAKLVVDATQQQENELGDAAN 101
Query: 444 TATVLARAIAKEGFEKISKGANPIXIXXGVMLAV 545
V + + I G P+ I G +A+
Sbjct: 102 FVVVFTGELLAKAENMIRMGLTPLEIAKGYEMAL 135
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 29.5 bits (63), Expect = 0.42
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 74 TINNNFLKTVASTLAACSVKXAFSSINHINFQRFYAKDVRFGADVRALMLQGVD 235
++NNN + V A C+V FSS H F Y ++ + R L L D
Sbjct: 435 SLNNNTVPLVV-VYAVCAVSARFSSRMHDRFSPPYMAGEQYAREARRLALDNFD 487
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 98 TVASTLAACSVKXAFSSINHINFQRFYAKDVRFGADVRALMLQGVDI 238
T+A L + + F + H + Q FY + G V+ L LQ +D+
Sbjct: 354 TIAIPLTSSKTETPFVVLVHTSGQFFYLDFLLDGKSVKGLSLQALDL 400
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 25.8 bits (54), Expect = 5.1
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 285 VILEQSWGSPKITKDGVTVAK-GVELKDKFXNIGAKLV 395
VI ++ S +T G T G+ELKD+F +G K++
Sbjct: 544 VIKQERPDSIYVTFGGQTALNVGIELKDEFEQLGVKVL 581
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 197 QTSHLWHKIVES*YDLW 147
Q SH W+K+V S +LW
Sbjct: 326 QVSHHWYKLVSSNEELW 342
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 270 DPVVTATASARMSTPCSMRALTSAPNLTSL 181
DPV A SAR S+ S ++ + P+L +L
Sbjct: 563 DPVYLAAISARRSSVISNASIETGPSLRNL 592
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,062,698
Number of Sequences: 5004
Number of extensions: 34852
Number of successful extensions: 113
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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