Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_K04
(658 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 250 2e-65
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 237 2e-61
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 131 1e-55
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 195 7e-49
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 181 1e-44
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 157 2e-37
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 151 2e-35
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 138 1e-31
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 132 5e-30
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 124 2e-27
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 123 3e-27
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 117 3e-25
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 3e-12
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 69 1e-10
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 68 2e-10
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 55 1e-06
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 49 1e-04
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 48 2e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 5e-04
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 42 0.013
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 31 0.027
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 41 0.030
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 39 0.12
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 38 0.16
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 37 0.37
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 250 bits (613), Expect = 2e-65
Identities = 113/160 (70%), Positives = 127/160 (79%)
Frame = +1
Query: 178 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 357
QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAA
Sbjct: 39 QDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAA 98
Query: 358 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGAR 537
Y TG E+NVEPVD+GP AF C+LDVGLARTTTGAR
Sbjct: 99 YCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGAR 158
Query: 538 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAH 657
VFGAMKGAVDGGLN+PHS+KRFPGY AE+K FNA+VHRAH
Sbjct: 159 VFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAH 198
Score = 79.0 bits (186), Expect = 9e-14
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 170
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRL 36
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 237 bits (580), Expect = 2e-61
Identities = 106/162 (65%), Positives = 124/162 (76%)
Frame = +1
Query: 172 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 351
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 352 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 531
AAY TG EYNVE +D P AF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 532 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAH 657
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR H
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKH 198
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 170
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 131 bits (316), Expect(2) = 1e-55
Identities = 59/70 (84%), Positives = 61/70 (87%)
Frame = +1
Query: 448 EYNVEPVDNGPXAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 627
EYNVE V+NGP AF CYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPGYDAESK
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 628 KFNAEVHRAH 657
FNAE HRAH
Sbjct: 158 TFNAEAHRAH 167
Score = 108 bits (259), Expect(2) = 1e-55
Identities = 46/53 (86%), Positives = 51/53 (96%)
Frame = +1
Query: 172 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 330
+VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 37 IVQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 170
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRL 36
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 195 bits (476), Expect = 7e-49
Identities = 92/159 (57%), Positives = 110/159 (69%)
Frame = +1
Query: 175 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 354
VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38 VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97
Query: 355 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGA 534
AY+TG +YNVE + F LD+GLARTTTG+
Sbjct: 98 AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS 156
Query: 535 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHR 651
++F MKG DGG+NVPHS RF G+D ESK++NAE HR
Sbjct: 157 KIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHR 195
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 170
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 181 bits (441), Expect = 1e-44
Identities = 80/157 (50%), Positives = 102/157 (64%)
Frame = +1
Query: 172 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 351
+ QDKNKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYA
Sbjct: 46 ITQDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYA 105
Query: 352 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 531
A Y+TG +Y+VE D F C+LD GL RT+TG
Sbjct: 106 ATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTG 165
Query: 532 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 642
ARVF A+KGAVDGGL++PH+ KRF GYD + K + +
Sbjct: 166 ARVFAALKGAVDGGLDIPHNEKRFAGYDLQDKSHDPD 202
Score = 39.5 bits (88), Expect = 0.069
Identities = 21/33 (63%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 78 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRL 170
V K Y RYQVKF RRR G KTDY AR+RL
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRL 45
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 157 bits (382), Expect = 2e-37
Identities = 77/166 (46%), Positives = 101/166 (60%), Gaps = 6/166 (3%)
Frame = +1
Query: 172 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 351
++QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYA
Sbjct: 60 VLQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYA 119
Query: 352 AAYSTG------XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGL 513
AAY+TG + + E D F LDVGL
Sbjct: 120 AAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGL 179
Query: 514 ARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHR 651
ARTTTGARVFG +KGAVDGG+ VPH RFPGY+ E +A+VHR
Sbjct: 180 ARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHR 225
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 170
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQM 59
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 151 bits (365), Expect = 2e-35
Identities = 72/166 (43%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Frame = +1
Query: 172 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 351
++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YA
Sbjct: 326 IIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYA 385
Query: 352 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 531
AAY+TG +NV+ F LD GL RTTTG
Sbjct: 386 AAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTG 445
Query: 532 ARVFGAMKGAVDGGLNVPHSIKRFPGY-----DAESKKFNAEVHRA 654
RVFG +KGA DGG+N+PHS RFPGY + ES K+ E H+A
Sbjct: 446 NRVFGVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKA 491
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 155
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 138 bits (333), Expect = 1e-31
Identities = 69/163 (42%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Frame = +1
Query: 172 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 351
+VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYA
Sbjct: 37 IVQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYA 96
Query: 352 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 531
AAY+TG + N++ P F LD+GL R+T G
Sbjct: 97 AAYATGLLLARRTLKTLKMDKFYEGNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLG 151
Query: 532 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAES---KKFNAEVHR 651
RVF A+KGA DGG+++PH+ +RFPG+ ++ +K++A VH+
Sbjct: 152 NRVFAALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHK 194
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLACSGQEQ 191
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL +++
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDK 43
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 132 bits (320), Expect = 5e-30
Identities = 74/172 (43%), Positives = 90/172 (52%), Gaps = 3/172 (1%)
Frame = +1
Query: 136 KGKLIIMLVNASLVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELP 315
+GK A ++QDKNKYN K R IVR +N + CQ+A S IEGD I+ A S EL
Sbjct: 25 EGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELI 84
Query: 316 RYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXA 486
RYG+ VGL NYAAAY+TG E + +
Sbjct: 85 RYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKP 144
Query: 487 FXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 642
+LDVG+ RTTTG RVF A+KGA DGGLN+PH RFPG +FN E
Sbjct: 145 IKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFPG---SKNEFNPE 193
Score = 65.7 bits (153), Expect = 9e-10
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 170
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKAL 36
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 124 bits (298), Expect = 2e-27
Identities = 66/145 (45%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Frame = +1
Query: 226 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 405
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 406 XXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 585
Y+VE +N F LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 586 HSIKRFPGYDAESKK---FNAEVHR 651
HS KRFPGY + + ++A+ HR
Sbjct: 124 HSEKRFPGYSVDEENNGTYDAQAHR 148
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 123 bits (297), Expect = 3e-27
Identities = 64/141 (45%), Positives = 81/141 (57%)
Frame = +1
Query: 178 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 357
QDK KY KYRL+ R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY AA
Sbjct: 38 QDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAA 97
Query: 358 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGAR 537
Y+TG EY + + P F LDVGLARTTTGA+
Sbjct: 98 YATG---LLVARRFLTQMKLADVFKTEITEEYLNDEENRRP--FKVILDVGLARTTTGAK 152
Query: 538 VFGAMKGAVDGGLNVPHSIKR 600
VF MKGAVDGGL +PH++ R
Sbjct: 153 VFAVMKGAVDGGLFIPHNVCR 173
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3
Query: 75 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 170
K+VKN YF R+Q KF+RRRE KTDY R +L
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQL 35
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 117 bits (281), Expect = 3e-25
Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Frame = +1
Query: 178 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 357
QD N + K+RL+VR++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AA
Sbjct: 33 QDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAA 92
Query: 358 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVDNGPXAFXCYLDVGLARTTTGA 534
Y+TG Y+V + +D A +LD+GLAR+T GA
Sbjct: 93 YATGFLIGRRALTAMSLDEVYRPKEIDGT--YSVTKDIDGEKKAPRVFLDIGLARSTRGA 150
Query: 535 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVH 648
RVFGA+KGA D GLNVPHS +F G+ + E+H
Sbjct: 151 RVFGALKGASDAGLNVPHSAAKFYGHKPDGSFDAKELH 188
Score = 36.3 bits (80), Expect = 0.65
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 90 KQYFKRYQVKFKRRREGKTDYYARKRL 170
+ Y K +QVK +RRREGKTDY R +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNM 30
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 214 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 369
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +1
Query: 508 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVH 648
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+FNAEV+
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVY 117
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +1
Query: 448 EYNVEPVDNGPXAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 627
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 628 KFNAEVHR 651
+ +A+VHR
Sbjct: 102 QLDAKVHR 109
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/141 (28%), Positives = 65/141 (46%)
Frame = +1
Query: 178 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 357
QDK K+ K R+I+R S ++++ Q+ S ++GD I+ ++Y L + K NY +
Sbjct: 39 QDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFS 98
Query: 358 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGAR 537
Y G YN + N +D+GL R T G +
Sbjct: 99 YLLGYYFGKDLIEKVKQSET-----------YNKK---NYSSKITAIIDIGLKRATIGNK 144
Query: 538 VFGAMKGAVDGGLNVPHSIKR 600
F +MKG+VD G+N+PH+ +
Sbjct: 145 SFASMKGSVDSGINIPHNYNK 165
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 87 NKQYFKRYQVKFKRRREGKTDYYARKRL 170
N Y R+++K +RRR GKTDY R +L
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKL 36
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 178 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 279
QDKNKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 50 QDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
Score = 52.4 bits (120), Expect = 9e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 170
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRL 47
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1
Query: 499 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 606
LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 211 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 369
R++VR +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTG 86
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +3
Query: 105 RYQVKFKRRREGKTDYYARKRLACSG 182
RY V F+RR EGKTDYY R L SG
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSSG 31
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1
Query: 499 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 609
LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 104 LDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 205 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 369
K R+ VR+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 39.5 bits (88), Expect = 0.069
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 105 RYQVKFKRRREGKTDYYARKRLACSGQEQI 194
RY+V +RRREGKT+YY R RL SG+ ++
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLVKSGKPRM 35
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 499 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 606
LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 106 LDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.9 bits (94), Expect = 0.013
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +3
Query: 105 RYQVKFKRRREGKTDYYARKRLACSGQEQI 194
RY+V F+RRREG+T+Y+ R +L SGQ+++
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQDRV 35
Score = 41.1 bits (92), Expect = 0.023
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 499 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 606
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
Score = 37.1 bits (82), Expect = 0.37
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 211 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 369
R++VR S ++V Q+ EGD +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 31.1 bits (67), Expect(2) = 0.027
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 487 FXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 591
F +D+G R R+ +KG +DGG+ +P S
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVS 155
Score = 29.1 bits (62), Expect(2) = 0.027
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 205 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 369
K+R +N +++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 48 KFRSYFTTTNTNLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 40.7 bits (91), Expect = 0.030
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 499 LDVGLARTTTGARVFGAMKGAVDGGLNVPHS 591
LD+GL T G++VF +GA+D GL++PH+
Sbjct: 103 LDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
Score = 39.5 bits (88), Expect = 0.069
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 205 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 369
K RL+ R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 36.3 bits (80), Expect = 0.65
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 105 RYQVKFKRRREGKTDYYARKRLACSGQEQI 194
RY+V +RRRE +TDY+ R RL SG+ ++
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLLKSGKPRL 35
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 38.7 bits (86), Expect = 0.12
Identities = 39/133 (29%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Frame = +1
Query: 211 RLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXX 387
R IVR++ K V QVA YS I GD I+ L +YGV + N Y G
Sbjct: 29 RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLAKYGVDLRGNNIQVCYLVGYIA--- 84
Query: 388 XXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGARVFGAMKGAVD 567
+E NG + LD G + G R+ +KG D
Sbjct: 85 ----------------------GIESEKNGVES--AVLDTGRRKFRKGGRIAACLKGFTD 120
Query: 568 GGLNVPHSIKRFP 606
G+ VPH FP
Sbjct: 121 AGIEVPHGEDVFP 133
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 111 QVKFKRRREGKTDYYARKRLACSGQEQI*HT*ISSDCASLQQRCNMP 251
+++F+R +EGKTDYYARKRL + + +T D + QR ++P
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEY-NTPEXDDSSCNXQRYHLP 81
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 37.1 bits (82), Expect = 0.37
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 499 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 606
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 108 YQVKFKRRREGKTDYYARKRL 170
Y+V+FKRRREGKT+Y R +L
Sbjct: 7 YKVQFKRRREGKTNYNKRYKL 27
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,701,721
Number of Sequences: 1657284
Number of extensions: 12033487
Number of successful extensions: 30363
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 29297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30347
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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