Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_K01
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09587-1|AAA57001.1|  685|Homo sapiens glycyl-tRNA synthetase pr...    35   0.22 
U09510-1|AAA86443.1|  685|Homo sapiens glycyl-tRNA synthetase pr...    35   0.22 
D30658-1|BAA06338.1|  739|Homo sapiens glycyl tRNA synthetase pr...    35   0.22 
BC007755-1|AAH07755.1|  739|Homo sapiens glycyl-tRNA synthetase ...    35   0.22 
BC007722-1|AAH07722.1|  739|Homo sapiens glycyl-tRNA synthetase ...    35   0.22 
BC037317-1|AAH37317.2|  294|Homo sapiens KIAA1107 protein protein.     31   4.8  
AB029030-1|BAA83059.1| 1278|Homo sapiens KIAA1107 protein protein.     31   4.8  

>U09587-1|AAA57001.1|  685|Homo sapiens glycyl-tRNA synthetase
           protein.
          Length = 685

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +3

Query: 561 EEILAPLRANVKXQGDLVXKLNRXKS 638
           EE+LAPLR  V+ QGDLV KL   K+
Sbjct: 7   EEVLAPLRLAVRQQGDLVRKLKEDKA 32


>U09510-1|AAA86443.1|  685|Homo sapiens glycyl-tRNA synthetase
           protein.
          Length = 685

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +3

Query: 561 EEILAPLRANVKXQGDLVXKLNRXKS 638
           EE+LAPLR  V+ QGDLV KL   K+
Sbjct: 7   EEVLAPLRLAVRQQGDLVRKLKEDKA 32


>D30658-1|BAA06338.1|  739|Homo sapiens glycyl tRNA synthetase
           protein.
          Length = 739

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +3

Query: 561 EEILAPLRANVKXQGDLVXKLNRXKS 638
           EE+LAPLR  V+ QGDLV KL   K+
Sbjct: 61  EEVLAPLRLAVRQQGDLVRKLKEDKA 86


>BC007755-1|AAH07755.1|  739|Homo sapiens glycyl-tRNA synthetase
           protein.
          Length = 739

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +3

Query: 561 EEILAPLRANVKXQGDLVXKLNRXKS 638
           EE+LAPLR  V+ QGDLV KL   K+
Sbjct: 61  EEVLAPLRLAVRQQGDLVRKLKEDKA 86


>BC007722-1|AAH07722.1|  739|Homo sapiens glycyl-tRNA synthetase
           protein.
          Length = 739

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +3

Query: 561 EEILAPLRANVKXQGDLVXKLNRXKS 638
           EE+LAPLR  V+ QGDLV KL   K+
Sbjct: 61  EEVLAPLRLAVRQQGDLVRKLKEDKA 86


>BC037317-1|AAH37317.2|  294|Homo sapiens KIAA1107 protein protein.
          Length = 294

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 13/55 (23%), Positives = 29/55 (52%)
 Frame = -2

Query: 170 KEKDDEIRKCQMLAKNSIDEYKICLFDFDSMDCSDRN*HFLPLRDKRNIVRTIXN 6
           +E +D I +C+    NS+ + +  + D  S+D S +N   +   +K+N +  + +
Sbjct: 142 RESEDNILECKQNKGNSVCKNESTVLDLSSIDSSRKNKQSVSATEKKNTIDVLSS 196


>AB029030-1|BAA83059.1| 1278|Homo sapiens KIAA1107 protein protein.
          Length = 1278

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 13/55 (23%), Positives = 29/55 (52%)
 Frame = -2

Query: 170  KEKDDEIRKCQMLAKNSIDEYKICLFDFDSMDCSDRN*HFLPLRDKRNIVRTIXN 6
            +E +D I +C+    NS+ + +  + D  S+D S +N   +   +K+N +  + +
Sbjct: 976  RESEDNILECKQNKGNSVCKNESTVLDLSSIDSSRKNKQSVSATEKKNTIDVLSS 1030


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,600,175
Number of Sequences: 237096
Number of extensions: 1119596
Number of successful extensions: 1995
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1995
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)