Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_K01
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2469|AAN11786.1|  765|Drosophila melanogaster CG6778-PB...    37   0.021
AY051413-1|AAK92837.1|  679|Drosophila melanogaster GH09263p pro...    31   1.4  
AE014296-2470|AAF49668.2|  679|Drosophila melanogaster CG6778-PA...    31   1.4  
AE014297-3343|AAS65196.1|  709|Drosophila melanogaster CG33337-P...    29   7.3  
U42204-1|AAB50956.1|  855|Drosophila melanogaster putative potas...    28   9.7  
U36925-1|AAB50936.1|  855|Drosophila melanogaster seizure potass...    28   9.7  
AY058350-1|AAL13579.1|  855|Drosophila melanogaster GH12235p pro...    28   9.7  
AE013599-3790|AAF47148.1|  855|Drosophila melanogaster CG3182-PB...    28   9.7  
AE013599-3789|AAM68296.1|  855|Drosophila melanogaster CG3182-PA...    28   9.7  

>AE014296-2469|AAN11786.1|  765|Drosophila melanogaster CG6778-PB,
           isoform B protein.
          Length = 765

 Score = 37.1 bits (82), Expect = 0.021
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 507 RLKYRILFREIIMADPXIEEILAPLRANVKXQGDLVXKL 623
           ++K R    E IM++P IE  LAPLR  V+ QG+LV  L
Sbjct: 75  KVKLRSAAAEFIMSNPEIEAQLAPLRERVQEQGNLVRDL 113


>AY051413-1|AAK92837.1|  679|Drosophila melanogaster GH09263p
           protein.
          Length = 679

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 543 MADPXIEEILAPLRANVKXQGDLVXKL 623
           M++P IE  LAPLR  V+ QG+LV  L
Sbjct: 1   MSNPEIEAQLAPLRERVQEQGNLVRDL 27


>AE014296-2470|AAF49668.2|  679|Drosophila melanogaster CG6778-PA,
           isoform A protein.
          Length = 679

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 543 MADPXIEEILAPLRANVKXQGDLVXKL 623
           M++P IE  LAPLR  V+ QG+LV  L
Sbjct: 1   MSNPEIEAQLAPLRERVQEQGNLVRDL 27


>AE014297-3343|AAS65196.1|  709|Drosophila melanogaster CG33337-PA
           protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 151 LESAKCWRKTRLTSTKYVSLTLIPWIAVTGIDIFS 47
           LES K W  T L  + Y +LT + W    G  +F+
Sbjct: 539 LESGKPWLMTTLEVSSYYTLTRVGWPMAVGWVVFA 573


>U42204-1|AAB50956.1|  855|Drosophila melanogaster putative
           potassium channel subunithomolog protein.
          Length = 855

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 191 NTSTSSEKEKDDEIRKCQMLAKNSIDEYKICLFD 90
           N +TS  K K+D  R   +  +N I  Y + LFD
Sbjct: 819 NVNTSVHKVKNDNSRDLNIFIENEIANYHLDLFD 852


>U36925-1|AAB50936.1|  855|Drosophila melanogaster seizure potassium
           channel protein.
          Length = 855

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 191 NTSTSSEKEKDDEIRKCQMLAKNSIDEYKICLFD 90
           N +TS  K K+D  R   +  +N I  Y + LFD
Sbjct: 819 NVNTSVHKVKNDNSRDLNIFIENEIANYHLDLFD 852


>AY058350-1|AAL13579.1|  855|Drosophila melanogaster GH12235p
           protein.
          Length = 855

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 191 NTSTSSEKEKDDEIRKCQMLAKNSIDEYKICLFD 90
           N +TS  K K+D  R   +  +N I  Y + LFD
Sbjct: 819 NVNTSVHKVKNDNSRDLNIFIENEIANYHLDLFD 852


>AE013599-3790|AAF47148.1|  855|Drosophila melanogaster CG3182-PB,
           isoform B protein.
          Length = 855

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 191 NTSTSSEKEKDDEIRKCQMLAKNSIDEYKICLFD 90
           N +TS  K K+D  R   +  +N I  Y + LFD
Sbjct: 819 NVNTSVHKVKNDNSRDLNIFIENEIANYHLDLFD 852


>AE013599-3789|AAM68296.1|  855|Drosophila melanogaster CG3182-PA,
           isoform A protein.
          Length = 855

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 191 NTSTSSEKEKDDEIRKCQMLAKNSIDEYKICLFD 90
           N +TS  K K+D  R   +  +N I  Y + LFD
Sbjct: 819 NVNTSVHKVKNDNSRDLNIFIENEIANYHLDLFD 852


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,085,486
Number of Sequences: 53049
Number of extensions: 363170
Number of successful extensions: 803
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)