Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_J23
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    24   1.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = -3

Query: 495 CDDDY*CPSSAGYQDSSPN*PSFP-CRGPLACSWRPALWPPPV*HVN 358
           C  +Y C  +    D+     S P CR  L CS   ALWP P   V+
Sbjct: 29  CKSNY-CQKAPITPDTEATGLSLPACR--LFCSEAAALWPKPTGEVH 72


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 411 LACSWRPALWPPPV*HVNSRNAYGS 337
           + CS  PA+WP PV H+   N   S
Sbjct: 70  MLCS-EPAIWPKPV-HIKLTNRESS 92


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 285 NNVHRKTSVTLGSKLPT*RVFGWLSSP 205
           N++    S++ G +LP    FG ++SP
Sbjct: 38  NSITVPLSISTGQRLPANFSFGQVNSP 64


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 286 WSNRRCKRLQDYTGARK*PVCISRVYVSHGRRPQRWP 396
           +SN   +    YTG+ + P     VY  H   PQ  P
Sbjct: 39  YSNYHYEDPYGYTGSEETPPSPQEVYYHHQTIPQDNP 75


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 286 WSNRRCKRLQDYTGARK*PVCISRVYVSHGRRPQRWP 396
           +SN   +    YTG+ + P     VY  H   PQ  P
Sbjct: 39  YSNYHYEDPYGYTGSEETPPSPQEVYYHHQTIPQDNP 75


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 286 WSNRRCKRLQDYTGARK*PVCISRVYVSHGRRPQRWP 396
           +SN   +    YTG+ + P     VY  H   PQ  P
Sbjct: 39  YSNYHYEDPYGYTGSEETPPSPQEVYYHHQTIPQDNP 75


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -3

Query: 399  WRPALWPPPV 370
            W+P  W PP+
Sbjct: 1369 WQPTEWHPPI 1378


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,103
Number of Sequences: 336
Number of extensions: 3435
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)