Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_J22
         (477 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113429-1|AAM29434.1|  112|Drosophila melanogaster RE23864p pro...   168   4e-42
AE014134-1484|AAF52660.1|  112|Drosophila melanogaster CG13393-P...   168   4e-42
AY089240-1|AAL89978.1|  275|Drosophila melanogaster AT02829p pro...    29   3.3  
AE014134-74|AAF51517.1|  275|Drosophila melanogaster CG11601-PA ...    29   3.3  

>AY113429-1|AAM29434.1|  112|Drosophila melanogaster RE23864p
           protein.
          Length = 112

 Score =  168 bits (408), Expect = 4e-42
 Identities = 75/104 (72%), Positives = 85/104 (81%)
 Frame = +3

Query: 90  MSSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFI 269
           M  L++VI K Y +Y   TPKKLK++D YL YI LT +IQF YCCLVGTFPFNSFLSGFI
Sbjct: 1   MVELSSVISKFYNDYVQNTPKKLKLVDIYLGYILLTGIIQFVYCCLVGTFPFNSFLSGFI 60

Query: 270 STVSCFVLGVCLRLQVNPXNKNEFQGLSAERGFADFIFAHLVLH 401
           STVSCFVL VCLRLQ NP NK+ F G+S ERGFADFIFAH++LH
Sbjct: 61  STVSCFVLAVCLRLQANPQNKSVFAGISPERGFADFIFAHVILH 104


>AE014134-1484|AAF52660.1|  112|Drosophila melanogaster CG13393-PA
           protein.
          Length = 112

 Score =  168 bits (408), Expect = 4e-42
 Identities = 75/104 (72%), Positives = 85/104 (81%)
 Frame = +3

Query: 90  MSSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFI 269
           M  L++VI K Y +Y   TPKKLK++D YL YI LT +IQF YCCLVGTFPFNSFLSGFI
Sbjct: 1   MVELSSVISKFYNDYVQNTPKKLKLVDIYLGYILLTGIIQFVYCCLVGTFPFNSFLSGFI 60

Query: 270 STVSCFVLGVCLRLQVNPXNKNEFQGLSAERGFADFIFAHLVLH 401
           STVSCFVL VCLRLQ NP NK+ F G+S ERGFADFIFAH++LH
Sbjct: 61  STVSCFVLAVCLRLQANPQNKSVFAGISPERGFADFIFAHVILH 104


>AY089240-1|AAL89978.1|  275|Drosophila melanogaster AT02829p
           protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 156 LKIIDAYLFYIFLTAVIQFGYCC-LVGTFPFN 248
           L+++ AYL Y+FL  ++ F   C L+G F  N
Sbjct: 226 LEVLPAYLRYVFLALLVGFNLVCYLLGEFANN 257


>AE014134-74|AAF51517.1|  275|Drosophila melanogaster CG11601-PA
           protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 156 LKIIDAYLFYIFLTAVIQFGYCC-LVGTFPFN 248
           L+++ AYL Y+FL  ++ F   C L+G F  N
Sbjct: 226 LEVLPAYLRYVFLALLVGFNLVCYLLGEFANN 257


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,511,312
Number of Sequences: 53049
Number of extensions: 326746
Number of successful extensions: 745
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)