Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_J21
(515 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 105 3e-23
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 91 6e-19
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 87 6e-18
07_01_1001 - 8460467-8460799 66 1e-11
07_03_0321 + 16757414-16757743 62 2e-10
08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89... 33 0.18
01_06_0098 - 26416768-26416998 32 0.31
03_06_0533 + 34565062-34565439 31 0.73
06_03_1287 - 29011710-29011871,29012209-29012272,29012556-290126... 30 1.3
12_01_0090 + 717524-719080 29 2.9
06_03_0854 + 25400855-25403741,25406174-25407708 29 2.9
02_01_0545 + 3996568-3996645,3998061-3998168,3998409-3998493,399... 28 5.1
11_06_0264 - 21785450-21786928 27 6.8
12_02_1217 + 27082452-27083593,27085041-27085158 27 8.9
07_03_1321 - 25794146-25794904 27 8.9
05_02_0121 - 6834843-6835127 27 8.9
03_02_0539 - 9329572-9330729,9330988-9331041 27 8.9
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 105 bits (251), Expect = 3e-23
Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +1
Query: 100 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 279
YLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGREK +S+P
Sbjct: 7 YLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVP 66
Query: 280 VGGGXXXXXXXXXXXXXXXEEXKEDKK-XXXKEXSESDDDMGFGLFD 417
GGG +E KK +E ESDDDMGF LFD
Sbjct: 67 SGGGGGIAVAAPTAAGGGAAPAEEAKKEEKVEEKEESDDDMGFSLFD 113
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 90.6 bits (215), Expect = 6e-19
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +1
Query: 100 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 279
YLLA L G P+A D+ IL SVG E D K++ ++++L GKD+ ++IA+GREK +S+P
Sbjct: 200 YLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGREKFASVP 259
Query: 280 VGGGXXXXXXXXXXXXXXXEEXKEDKK-XXXKEXSESDDDMGFGLFD 417
GGG E KK +E ESDDDMGF LFD
Sbjct: 260 CGGGGVAVAAAAPAAGGGAAPQSEAKKEEKVEEKEESDDDMGFSLFD 306
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 87.4 bits (207), Expect = 6e-18
Identities = 48/111 (43%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Frame = +1
Query: 100 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 279
YL+A L G ++P A D+ IL SVG E D K++ ++++++GKD+ +LIA GREK +S+P
Sbjct: 7 YLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGREKFASVP 66
Query: 280 VGGG-----XXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 417
GGG E KEDK +E ESDDDMGF LFD
Sbjct: 67 SGGGGVAVAAAAPAAGGAGGAPAAEAKKEDK---VEEKEESDDDMGFSLFD 114
>07_01_1001 - 8460467-8460799
Length = 110
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +1
Query: 100 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 279
YL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E L+
Sbjct: 7 YLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSEMLAFGG 66
Query: 280 VGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 417
VG E+ KE++K E +DD+ F LFD
Sbjct: 67 VGAAPAAAATAGGGAAAAGEKEKEEEKV----EEEEEDDIVFSLFD 108
>07_03_0321 + 16757414-16757743
Length = 109
Score = 62.5 bits (145), Expect = 2e-10
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +1
Query: 100 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 279
YL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E L+
Sbjct: 7 YLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEMLAF-- 64
Query: 280 VGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 417
G E +E++K KE E +DD+ F LFD
Sbjct: 65 --GAAPAAAAATAGGAAAAGEKEEEEKVEEKE-KEGEDDIVFSLFD 107
>08_01_0113 +
897970-898038,898148-898271,898811-898896,898996-899049
Length = 110
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1
Query: 349 EDKKXXXKEXSESDDDMGFGLFD 417
E+KK KE ESDDDMGF LFD
Sbjct: 90 EEKKEEAKE--ESDDDMGFSLFD 110
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.9 bits (69), Expect = 0.31
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 133 PAAADVEKILSSVGIEADAEKLKKVITELNGKD 231
P V KI+ +V IEAD+ + K ++ L GKD
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>03_06_0533 + 34565062-34565439
Length = 125
Score = 30.7 bits (66), Expect = 0.73
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 20 VQRRTLFFRHYTFRVN*DLKNALRGRAIYWLCWVARLRQLPLT-LRRSSA 166
V+RR LF R Y F + +L R R + W+ + RLR+ T LRR A
Sbjct: 30 VERRQLFLRSYHFSRDVELSPRARARRVVWV-GLRRLRRAAATGLRRLRA 78
>06_03_1287 -
29011710-29011871,29012209-29012272,29012556-29012611,
29012787-29012984
Length = 159
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 349 EDKKXXXKEXSESDDDMGFGLFD 417
E+KK KE ES+DD+GF LFD
Sbjct: 139 EEKKEEEKE--ESEDDLGFSLFD 159
>12_01_0090 + 717524-719080
Length = 518
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 287 PPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIF 153
PP + S P ++ S+S SS + + ++S S+PT L F
Sbjct: 60 PPAVLSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTF 104
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1
Query: 290 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPP 117
PPP I + A +S P+S+V + L+ SASA+ F+ + A +PP
Sbjct: 1120 PPPAPIPAATPAKALVSAPAPAPISTVSSTLAASASAA-----AAFAPAPVAAEAIPP 1172
>02_01_0545 +
3996568-3996645,3998061-3998168,3998409-3998493,
3998789-3999024,3999250-3999423,3999510-3999557,
3999659-3999718,3999815-3999901,4000007-4000095,
4000209-4000300,4001110-4001171,4001271-4001420,
4001507-4001722
Length = 494
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 85 VTWPRYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKV 207
+TW +LLA K A A+V+ +LS+ I D +LKK+
Sbjct: 283 LTWSVFLLAQNPSKMRKAQAEVDSVLSNETINVD--QLKKL 321
>11_06_0264 - 21785450-21786928
Length = 492
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 290 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTE 165
PPP + + S AIS + V FL S++A IPTE
Sbjct: 384 PPPPPLATAASTATAISVAGLGGCGDVALFLGKSSAACIPTE 425
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 100 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKL 198
Y+LA+ TPA +D E+ VG +AD + L
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDL 59
>07_03_1321 - 25794146-25794904
Length = 252
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 248 AISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 105
A+ ++S P ++ T L A A + + R +T+AAA PPS+ S
Sbjct: 157 AMMRASSSPATNTTTSLVLDALAML-AKSRAIATAAAAAAAAPPSSGS 203
>05_02_0121 - 6834843-6835127
Length = 94
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 175 IEADAEKLKKVITELNGKDVEQLIAAGREK 264
+EADA + K V+ L GKD A+ E+
Sbjct: 17 VEADAAEFKSVVQSLTGKDSTAATASPEEE 46
>03_02_0539 - 9329572-9330729,9330988-9331041
Length = 403
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -1
Query: 266 SFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTS-AAAGVVLPPSTASK*RGH 90
S + A S S+S P SS L ++ +P+ AAAG ++PPS S H
Sbjct: 150 SSAAAAGASSSSSKPSSSAARQLPGGGASPMPSAAASTQPGGAAAGAIIPPSGLSSMSHH 209
Query: 89 V 87
+
Sbjct: 210 L 210
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,514,798
Number of Sequences: 37544
Number of extensions: 165899
Number of successful extensions: 559
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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