Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_J13
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 279 8e-75
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 279 8e-75
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 279 8e-75
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 279 8e-75
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 279 8e-75
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 279 8e-75
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 88 2e-17
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 2.0
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 31 3.5
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 31 3.5
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 31 3.5
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 31 3.5
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 31 3.5
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 31 3.5
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 31 3.5
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 31 3.5
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 31 3.5
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 31 3.5
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 279 bits (683), Expect = 8e-75
Identities = 135/187 (72%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
Frame = +2
Query: 35 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 211
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 212 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 391
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRS TLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 392 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLXKNQQTTIEHKVDTFQSVYXKLTGRE 571
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL K QQ +EHKV+TF VY KLTG++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 184
Query: 572 VTFEFPE 592
V FEFPE
Sbjct: 185 VNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 279 bits (683), Expect = 8e-75
Identities = 135/187 (72%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
Frame = +2
Query: 35 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 211
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 212 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 391
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRS TLT+
Sbjct: 63 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 122
Query: 392 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLXKNQQTTIEHKVDTFQSVYXKLTGRE 571
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL K QQ +EHKV+TF VY KLTG++
Sbjct: 123 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 182
Query: 572 VTFEFPE 592
V FEFPE
Sbjct: 183 VNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 279 bits (683), Expect = 8e-75
Identities = 135/187 (72%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
Frame = +2
Query: 35 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 211
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 212 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 391
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRS TLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 392 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLXKNQQTTIEHKVDTFQSVYXKLTGRE 571
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL K QQ +EHKV+TF VY KLTG++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 184
Query: 572 VTFEFPE 592
V FEFPE
Sbjct: 185 VNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 279 bits (683), Expect = 8e-75
Identities = 135/187 (72%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
Frame = +2
Query: 35 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 211
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 212 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 391
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRS TLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 392 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLXKNQQTTIEHKVDTFQSVYXKLTGRE 571
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL K QQ +EHKV+TF VY KLTG++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 184
Query: 572 VTFEFPE 592
V FEFPE
Sbjct: 185 VNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 279 bits (683), Expect = 8e-75
Identities = 135/187 (72%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
Frame = +2
Query: 35 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 211
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 212 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 391
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRS TLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 392 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLXKNQQTTIEHKVDTFQSVYXKLTGRE 571
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL K QQ +EHKV+TF VY KLTG++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 184
Query: 572 VTFEFPE 592
V FEFPE
Sbjct: 185 VNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 279 bits (683), Expect = 8e-75
Identities = 135/187 (72%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
Frame = +2
Query: 35 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 211
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 212 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 391
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRS TLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 392 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLXKNQQTTIEHKVDTFQSVYXKLTGRE 571
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL K QQ +EHKV+TF VY KLTG++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 184
Query: 572 VTFEFPE 592
V FEFPE
Sbjct: 185 VNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 88.2 bits (209), Expect = 2e-17
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +2
Query: 374 SXTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLXKNQQTTIEHKV 529
S TLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL K QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 546 TDWKVSTLCSIVVCWFLXKCTLMSCEPSNLTLMRLPTISAGKTKS 412
T W ++ LCS++ W L CT + P L+ L T+S+ KS
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKS 307
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +2
Query: 71 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 232
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 233 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILE 412
+ K+ + +R +KK G + + +PKP T V+ K + T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 413 DLVFP 427
+ P
Sbjct: 823 QKIIP 827
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +2
Query: 71 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 232
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 233 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILE 412
+ K+ + +R +KK G + + +PKP T V+ K + T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 413 DLVFP 427
+ P
Sbjct: 823 QKIIP 827
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +2
Query: 71 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 232
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 233 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILE 412
+ K+ + +R +KK G + + +PKP T V+ K + T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 413 DLVFP 427
+ P
Sbjct: 823 QKIIP 827
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +2
Query: 71 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 232
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 233 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILE 412
+ K+ + +R +KK G + + +PKP T V+ K + T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 413 DLVFP 427
+ P
Sbjct: 823 QKIIP 827
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +2
Query: 71 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 232
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 233 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILE 412
+ K+ + +R +KK G + + +PKP T V+ K + T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 413 DLVFP 427
+ P
Sbjct: 823 QKIIP 827
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +2
Query: 71 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 232
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 233 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILE 412
+ K+ + +R +KK G + + +PKP T V+ K + T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 413 DLVFP 427
+ P
Sbjct: 823 QKIIP 827
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +2
Query: 71 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 232
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 233 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILE 412
+ K+ + +R +KK G + + +PKP T V+ K + T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 413 DLVFP 427
+ P
Sbjct: 823 QKIIP 827
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +2
Query: 71 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 232
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 233 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILE 412
+ K+ + +R +KK G + + +PKP T V+ K + T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 413 DLVFP 427
+ P
Sbjct: 823 QKIIP 827
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +2
Query: 71 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 232
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 233 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILE 412
+ K+ + +R +KK G + + +PKP T V+ K + T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 413 DLVFP 427
+ P
Sbjct: 823 QKIIP 827
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +2
Query: 71 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 232
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 233 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILE 412
+ K+ + +R +KK G + + +PKP T V+ K + T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 413 DLVFP 427
+ P
Sbjct: 823 QKIIP 827
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,367,780
Number of Sequences: 237096
Number of extensions: 1782077
Number of successful extensions: 3059
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3053
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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