Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_J12
         (369 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q97XU1 Cluster: Putative uncharacterized protein; n=1; ...    34   0.95 
UniRef50_Q55F10 Cluster: Putative uncharacterized protein; n=1; ...    32   3.8  

>UniRef50_Q97XU1 Cluster: Putative uncharacterized protein; n=1;
           Sulfolobus solfataricus|Rep: Putative uncharacterized
           protein - Sulfolobus solfataricus
          Length = 511

 Score = 33.9 bits (74), Expect = 0.95
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
 Frame = -1

Query: 279 LIFRILFLSIYYWINSIISHFQIAS-KQ*NLKP----FSIDYLHYDAVCFKFLSLVLXVI 115
           + F I FL +Y  IN  I+ F+I+  K  +L      F ++ L+ + V F F +L+  VI
Sbjct: 98  ITFSITFLLLYTMINKAINIFKISRYKSLSLIIGVLFFLLNPLYLEYVAFNFYNLIWGVI 157

Query: 114 IHMYMVHNLLGQLIN 70
           I  Y++  L+  ++N
Sbjct: 158 IFSYILIKLIDIVVN 172


>UniRef50_Q55F10 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 987

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 16/73 (21%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = -1

Query: 276 IFRILFLSIYYWINSIISHFQIASKQ*NLKPFSIDYL--HYDAVCFKFLSLVLXVIIHMY 103
           +F++LF+ +++   S++   ++     +   F+I YL  +Y  +    L++++ VII ++
Sbjct: 746 LFQVLFIPLFFNSISLLVSKEVDGNHFSALDFTIYYLNDNYLQITLFTLAIIIIVIISLF 805

Query: 102 MVHNLLGQLINTL 64
           ++   L  +IN +
Sbjct: 806 LIILFLNPIINNI 818


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,497,263
Number of Sequences: 1657284
Number of extensions: 1799957
Number of successful extensions: 3345
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3344
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)