Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_J06
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 179 3e-46
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 173 1e-44
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 165 6e-42
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 146 3e-36
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 120 1e-28
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 118 7e-28
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 111 6e-26
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 101 7e-23
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 97 1e-21
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 71 1e-13
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 71 1e-13
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 70 3e-13
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 66 6e-12
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 65 1e-11
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 64 2e-11
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 59 5e-10
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 58 1e-09
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 52 1e-07
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 43 4e-05
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 43 4e-05
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 36 0.007
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 34 0.021
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 30 0.34
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 4.1
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 5.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.2
SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po... 25 9.5
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 179 bits (436), Expect = 3e-46
Identities = 86/171 (50%), Positives = 116/171 (67%)
Frame = +2
Query: 131 CVKMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKL 310
C + Y YLFK ++IGD+GVGKS LL++FT F TIGVEF R I +D K+IK
Sbjct: 2 CQEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKA 61
Query: 311 QIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLI 490
QIWDTAGQE +R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R+H++SN+VIML+
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLV 121
Query: 491 GNKSDLXXXXXXXXXXXXXXXXXHGLVFMETSAKTAANVEEAFINTAKXIY 643
GNK+DL + L F+ETSA A+NVEEAF I+
Sbjct: 122 GNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIF 172
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 173 bits (422), Expect = 1e-44
Identities = 81/166 (48%), Positives = 111/166 (66%)
Frame = +2
Query: 143 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 322
+Y YL K ++IGD+GVGKSCLLL+F++ F P TIG++F R I +DGK+IKLQIWD
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 323 TAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKS 502
TAGQE FR+IT +YYRGA G LL+YD+T +++F+++ TW + QH++ N+ +LIGNK
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKC 124
Query: 503 DLXXXXXXXXXXXXXXXXXHGLVFMETSAKTAANVEEAFINTAKXI 640
D G+ F+E SAKT NV+EAF A+ I
Sbjct: 125 DCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 165 bits (400), Expect = 6e-42
Identities = 75/169 (44%), Positives = 113/169 (66%)
Frame = +2
Query: 146 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 325
Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R ++GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 326 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 505
AGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL++ +++ + +L+GNKSD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 124
Query: 506 LXXXXXXXXXXXXXXXXXHGLVFMETSAKTAANVEEAFINTAKXIYDKI 652
+ + F+ETSAK + NVE+AF+ ++ I +++
Sbjct: 125 MVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERM 173
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 146 bits (353), Expect = 3e-36
Identities = 74/177 (41%), Positives = 108/177 (61%), Gaps = 5/177 (2%)
Frame = +2
Query: 137 KMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI----DGKQI 304
K +Y YL K ++ G +G GKSCLL +F ++ T+G++F +R+I++ K+I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 305 KLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIM 484
KLQIWDTAGQE FRS+ R+YYRGAAGA+LVYD+T +++F L++WL D R + S + ++
Sbjct: 63 KLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVV 122
Query: 485 LIGNKSDL-XXXXXXXXXXXXXXXXXHGLVFMETSAKTAANVEEAFINTAKXIYDKI 652
L G+KSDL H ETS+ T +NVEE F++ I +I
Sbjct: 123 LAGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRI 179
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 120 bits (290), Expect = 1e-28
Identities = 56/161 (34%), Positives = 94/161 (58%)
Frame = +2
Query: 158 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 337
FK + +G+ VGK+ L+ +F +F + TIG++F ++ + ++ + ++LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 338 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLXXX 517
FRS+ SY R ++ A++VYDIT +F + W+ED R +++I+L+GNK+DL
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 518 XXXXXXXXXXXXXXHGLVFMETSAKTAANVEEAFINTAKXI 640
++ METSAK NV+ F A+ +
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQML 172
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 118 bits (284), Expect = 7e-28
Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Frame = +2
Query: 161 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID-GKQIKLQIWDTAGQE 337
K +++GD+ VGKS L+L+F +F + TIG F + + ID +KL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 338 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLXXX 517
++S+ YYR A A++VYDIT+ + +W+++ ++ + +VI L GNK DL
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 518 XXXXXXXXXXXXXXH-GLVFMETSAKTAANVEEAFINTAKXI 640
L+F ETSAKTA NV E F AK +
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 111 bits (268), Expect = 6e-26
Identities = 62/167 (37%), Positives = 97/167 (58%), Gaps = 6/167 (3%)
Frame = +2
Query: 152 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 331
+L K II+G++GVGK+ ++ Q+ +++F + TIG +F + + +D K + LQ+WDTAG
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 332 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSN---MVIMLIGNK 499
QE F+S+ ++YRGA +LVYD+ ++F L +W ++ Q S SN +L+GNK
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNK 126
Query: 500 SDL-XXXXXXXXXXXXXXXXXHG-LVFMETSAKTAANVEEAFINTAK 634
D+ G + + ETSAK A NV+EAF AK
Sbjct: 127 VDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 101 bits (243), Expect = 7e-23
Identities = 50/160 (31%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Frame = +2
Query: 161 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 340
K +I+GD+GVGK+CL+ QF +++F + TIG +F + + +D K + LQ+WDTAGQE
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 341 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSN---MVIMLIGNK--SD 505
F+S+ ++YRGA ++VY++ ++F+ + W ++ ++ + +++GN+ D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 506 LXXXXXXXXXXXXXXXXXHG--LVFMETSAKTAANVEEAF 619
HG ++ E SAK NV + F
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLF 169
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 97.5 bits (232), Expect = 1e-21
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Frame = +2
Query: 134 VKMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQ 313
++ Y +K +++GD GVGKS L +Q F +D TI + + IDG+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSY-RKKCEIDGEGALLD 59
Query: 314 IWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSNMVIMLI 490
+ DTAGQE + ++ Y R G LLVY+IT R +F+ ++T+ + R ++L+
Sbjct: 60 VLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLV 119
Query: 491 GNKSDLXXXXXXXXXXXXXXXXXHGLVFMETSAKTAANVEEAFINTAKXI 640
NK DL +++ETSAK NVEEAF + + I
Sbjct: 120 ANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 71.3 bits (167), Expect = 1e-13
Identities = 43/161 (26%), Positives = 75/161 (46%)
Frame = +2
Query: 158 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 337
FK +++GD G GK+ + + F+ + T+GVE + +I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 338 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLXXX 517
+ YY ++++D+T R T+ ++ W D + N+ I+L GNK D+
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVC-ENIPIVLCGNKVDV--K 126
Query: 518 XXXXXXXXXXXXXXHGLVFMETSAKTAANVEEAFINTAKXI 640
L + + SAK+ N E+ F+ A+ +
Sbjct: 127 ERKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 71.3 bits (167), Expect = 1e-13
Identities = 36/112 (32%), Positives = 56/112 (50%)
Frame = +2
Query: 170 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 349
+IGD+ +GK+ L++ + F T+GV F + I+I +I IWD GQ F +
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 74
Query: 350 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 505
+ A L ++D++R+ T N + W AR N V +LIG K D
Sbjct: 75 MLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGF-NKTAVPILIGTKYD 125
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 70.1 bits (164), Expect = 3e-13
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +2
Query: 161 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 340
K +I+GD GK+CLL+ F+ F V+ T+ + A + +DG+ I+L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQED 66
Query: 341 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDL 508
+ + Y + L+ + + E+ +++ W+ + H SN+ I+L+G K DL
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-LHFCSNLPILLVGCKVDL 122
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 65.7 bits (153), Expect = 6e-12
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Frame = +2
Query: 170 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 349
++G VGKS L +Q+ + F + TI F ++ I G++ +I DTAGQ+ +
Sbjct: 11 VLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDEYSI 69
Query: 350 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMV-IMLIGNKSDLXXXXXX 526
+ + G G +LVY IT + +F + + H+ + V I+++GNKSDL
Sbjct: 70 LNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAV 129
Query: 527 XXXXXXXXXXXHGLVFMETSAKTAANVEEAF 619
+ E SA+ NV AF
Sbjct: 130 TAEEGKALANEWKCAWTEASARHNENVARAF 160
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 64.9 bits (151), Expect = 1e-11
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Frame = +2
Query: 161 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 340
K +I+GD GK+ LL FT F V++ TI + I +DG I+L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 341 FRSITRSYYRGAAGALLVYDITRRETF-NHLTTWLEDARQHSNSNMVIMLIGNKSDLXXX 517
+ + Y ++ + + R++ N +T WL + + + ++L+ K DL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNC-PGVKLVLVALKCDLRGA 132
Query: 518 XXXXXXXXXXXXXXHGLV---------FMETSAKTAANVEEAFINTAK 634
GL ++E SAK V EAF A+
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 64.1 bits (149), Expect = 2e-11
Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +2
Query: 161 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 340
K +I+GD GK+CLL+ F+ F V+ T+ + A + +DG+ ++L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQED 66
Query: 341 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDL 508
+ + Y + L+ + + ++ +++ W+ + H S++ I+L+ K+DL
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-LHFCSSLPILLVACKADL 122
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = +2
Query: 161 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI--DGKQIKLQIWDTAGQ 334
K +++GD G GK+CLL+ F+ F + T+ + IT + K I+L +WDTAGQ
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENY-ITDITYGPNSKVIELALWDTAGQ 74
Query: 335 EAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHSNSNMVIMLIGNKSDL 508
E + + Y + LL + I + N++T W + QH I+L+G K+DL
Sbjct: 75 EEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEV-QHFCPRTPIVLVGLKADL 132
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 58.0 bits (134), Expect = 1e-09
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 161 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 340
K +++GD GK+ LL FT F + T+ + + +DGK ++L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDC-RVDGKSVQLALWDTAGQEE 68
Query: 341 FRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHSNSNMVIMLIGNKSDL 508
+ + Y A L+ + I ++ +++T W+E+ N+ +L+G K+DL
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVGMKADL 124
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 51.6 bits (118), Expect = 1e-07
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +2
Query: 161 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 340
K +++GD VGK+CLL+ +T +F + T+ + A + I + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNY-AVTVMIGDEPYTLGLFDTAGQED 63
Query: 341 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDL 508
+ + Y L+ + +T +F ++ W + H + +++G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-PGVPCLIVGTQIDL 119
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 42.7 bits (96), Expect = 4e-05
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 448
G + T++ + I +WD GQ+ R + R Y++ G + V D RE + L+
Sbjct: 50 GFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQR 109
Query: 449 ARQHSNSNMVIMLI-GNKSDL 508
++L+ NK DL
Sbjct: 110 MLNEDELRDALLLVFANKQDL 130
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 42.7 bits (96), Expect = 4e-05
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +2
Query: 161 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 340
+ +++G GK+ +L + K Q V +TI G + T+ K IK +WD GQ+
Sbjct: 23 RILMLGLDAAGKTTILYKL--KLNQSV--VTIPT-VGFNVETVTYKNIKFNVWDVGGQDK 77
Query: 341 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSNMVIMLIGNKSDL 508
R + R Y+ G G + V D + L + +++++ NK DL
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 35.5 bits (78), Expect = 0.007
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 FGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVY----DITRRETFNHLT 433
FG ++ T++ + ++ IWD GQ+ R+ ++Y+ + V D+ E N L
Sbjct: 48 FGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQ 107
Query: 434 TWLEDARQHSNSNMVIMLIGNKSDL 508
L + + S I+++ NKSD+
Sbjct: 108 ELLVEEKLLFTS---ILVLANKSDV 129
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 33.9 bits (74), Expect = 0.021
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Frame = +2
Query: 161 KYIIIGDTGVGKSCLL-LQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 337
K +++G +G GKS + + F++ + L ++ + G + L +WD GQE
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62
Query: 338 AFR----SITRSY-YRGAAGALLVYDITRRETFNHLTTW---LEDARQHSNSNMVIMLIG 493
AF S R + +R + V+D+ RE L T+ LE +S V LI
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQARVFCLI- 121
Query: 494 NKSDL 508
+K DL
Sbjct: 122 HKMDL 126
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 29.9 bits (64), Expect = 0.34
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -3
Query: 388 QSASRAPVVRSGDGPKSFLTSCVPNLQLDLLAINCDHPSTKFNTNSEI 245
Q+ + A V S P S+LTSC+P++++ L + P+ F +E+
Sbjct: 358 QTLACAKEVESERAPTSYLTSCLPSIKVILARVLESSPAFGFIERNEL 405
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 179 DTGVGKSCLLL--QFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 325
D + LLL Q D+ + V +LT+ + G ++ + K ++WD+
Sbjct: 440 DISMQNEALLLRKQENDRLVKQVEELTVALNSGKMNAIVEAESSKNELWDS 490
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 131 CVKMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFG 271
CV+ + F +++G++G GKS L+ ++ P ++ +FG
Sbjct: 89 CVRQGFN--FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDFG 133
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 167 IIIGDTGVGKSCLL 208
I++GDT GK+C+L
Sbjct: 1873 ILVGDTATGKTCIL 1886
>SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 434
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 167 IIIGDTGVGKSCLLLQFTDKRF 232
++IG TG GKS L +Q KRF
Sbjct: 7 VVIGTTGAGKSDLAVQLA-KRF 27
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,342,561
Number of Sequences: 5004
Number of extensions: 46157
Number of successful extensions: 168
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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