Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_J03
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 337 9e-94
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 109 5e-25
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 99 6e-22
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 95 8e-21
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 91 2e-19
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 91 2e-19
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 90 2e-19
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 83 5e-17
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 80 3e-16
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 77 2e-15
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 76 5e-15
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 71 2e-13
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 65 7e-12
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 65 7e-12
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 64 2e-11
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 61 1e-10
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 60 2e-10
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 40 4e-04
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 39 6e-04
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 39 7e-04
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.027
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 33 0.036
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 0.59
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 28 1.0
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 28 1.4
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 28 1.4
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 27 1.8
SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein L9|Schizosaccha... 26 5.5
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 25 7.3
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 7.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.3
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 25 9.6
SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomy... 25 9.6
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 25 9.6
SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 9.6
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo... 25 9.6
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 25 9.6
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 337 bits (828), Expect = 9e-94
Identities = 153/178 (85%), Positives = 162/178 (91%)
Frame = +1
Query: 121 DMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDT 300
++PTFK VLVGDGGTGKTTFVKRHLTGEFEKKY+ATLGVEVHPL FHTN G I FNVWDT
Sbjct: 6 NVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDT 65
Query: 301 AGQEKFGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDI 480
AGQEK GGL DGYYIQGQC IIMFDVTSR+TYKNVP+W RDLVRVCE IPIVLCGNKVD+
Sbjct: 66 AGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNKVDV 125
Query: 481 KDRKVXAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPALLP 654
K+RKV AK I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+G+ NLEFVA PAL P
Sbjct: 126 KERKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPALAP 183
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 109 bits (261), Expect = 5e-25
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 3/161 (1%)
Frame = +1
Query: 133 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 312
FK +L+GD G GK+ + R + + Y++T+GV+ F ++ +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 313 KFGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDR 489
+F + YY II++DVT + ++ NV W +++ R EG+ +L GNK D+ D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 490 KVXAKTIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 606
KV ++ F N+ + + SAK + N E+ FL ++R++
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 98.7 bits (235), Expect = 6e-22
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 4/169 (2%)
Frame = +1
Query: 133 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 312
FK V +G+ GKT+ + R + +F+ Y AT+G++ + +R +WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 313 KFGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG--IPIVLCGNKVDIKD 486
+F L Y AII++D+T+ ++ N W D VR G + IVL GNK D+ D
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED-VRAERGDDVIIVLVGNKTDLAD 130
Query: 487 RKVXAKTIVFHRKKNLQ--YYDISAKSNYNFEKPFLWLARKLIGDGNLE 627
++ + + K L+ + + SAK+ +N + F +A+ L G N+E
Sbjct: 131 KRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVE 179
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 95.1 bits (226), Expect = 8e-21
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 6/163 (3%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRGPIRFNVWDTAGQ 309
K VL+GD GK++ V R + +F+ +T+G L N ++ +WDTAGQ
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS-VKLEIWDTAGQ 74
Query: 310 EKFGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDI-K 483
E++ L YY CAI+++D+T + + +W ++L R EGI I L GNK+D+ +
Sbjct: 75 ERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQ 134
Query: 484 DRKVXAK--TIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 606
+R+ K + + NL +++ SAK+ N + F +A+KL
Sbjct: 135 ERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 90.6 bits (215), Expect = 2e-19
Identities = 45/164 (27%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
K +++G+ G GKT+ + +++ +F K Y AT+G + + + +WDTAGQE+
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 316 FGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRD-LVRVC----EGIPIVLCGNKVDI 480
F L +Y C ++++DV + +++ + +W + L++ E P +L GNKVD+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 481 KDRK---VXAKTIVF-HRKKNLQYYDISAKSNYNFEKPFLWLAR 600
+++K +K + F + + Y++ SAK N ++ F +A+
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 90.6 bits (215), Expect = 2e-19
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Frame = +1
Query: 133 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 312
FK VL+GD G GK+ + R EF + +T+GVE + I+ +WDTAGQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 313 KFGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-GIPIVLCGNKVDIKDR 489
++ + YY A+I++D+T + ++ NV W ++L + I I+L GNK D+
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
Query: 490 KVXA--KTIVFHRKKNLQYYDISAKSNYNFEKPF 585
+ + + F + NL + + SA N E+ F
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAF 164
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 90.2 bits (214), Expect = 2e-19
Identities = 44/160 (27%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
K +L+GD G GK+ + R F ++ T+G++ + I+ +WDTAGQE+
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 316 FGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDRK 492
F + YY ++++DVT + ++ NV W ++ + E + +L GNK D +D++
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 493 VXA--KTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 606
+ + + +++ + SAK+N N ++ F LAR++
Sbjct: 131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 82.6 bits (195), Expect = 5e-17
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +1
Query: 124 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 303
MPT KCV+VGDG GKT + + T +F YV T+ + + + P ++DTA
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTA 59
Query: 304 GQEKFGGLXDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI 480
GQE + L Y Q ++ F VTS +++NV W ++ C G+P ++ G ++D+
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDL 119
Query: 481 KD 486
+D
Sbjct: 120 RD 121
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 79.8 bits (188), Expect = 3e-16
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
K V++GD G GKT + + + +F ++Y AT+G + + + +WDTAGQE+
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 316 FGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE----GIPIVLCGNKVDIK 483
F L +Y C +I+++V + ++ +V NW ++ + P ++ GN++D K
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID-K 128
Query: 484 DRKVXA----KTIVFHRKK---NLQYYDISAKSNYNFEKPFLWLAR 600
D A + + + + K N+ +++ SAK N N F ++R
Sbjct: 129 DASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 77.4 bits (182), Expect = 2e-15
Identities = 44/166 (26%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP----IRFNVWDTA 303
K VL G GTGK+ ++R + +++ + T+G++ + G I+ +WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 304 GQEKFGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG-IPIVLCGNKVDI 480
GQEKF + YY A++++DVT++ +++ + +W D+ + I +VL G+K D+
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 481 KDRKVXA--KTIVFHRKKNL-QYYDISAKSNYNFEKPFLWLARKLI 609
++++ + + F +K++ ++ S+ + N E+ FL + +I
Sbjct: 131 QNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTII 176
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 75.8 bits (178), Expect = 5e-15
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Frame = +1
Query: 133 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 312
+K V+VGDGG GK+ + + F +Y T+ G + +V DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQE 67
Query: 313 KFGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVDIKD 486
++ + + Y G+ ++++++TSR ++ + +++ ++RV + P+VL NK D++
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 487 RKVXAKTIVFHRKKNLQ--YYDISAKSNYNFEKPFLWLARKL 606
+V ++ K++ Y + SAK N E+ F L R +
Sbjct: 128 ERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 70.5 bits (165), Expect = 2e-13
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 312
K V+VGDGG GKT + +G F ++YV T+ + + + N I +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 313 KFGGLXDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI-KD 486
++ L Y ++ F + + NV W+ ++ C PIVL G K D+ KD
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 487 R 489
R
Sbjct: 136 R 136
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 65.3 bits (152), Expect = 7e-12
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
K V+VGDG GKT + G F + YV T+ E + + I +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHIELALWDTAGQED 66
Query: 316 FGGLXDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKD 486
+ L Y +I F V + + NV W +++ C +PI+L G KVD+++
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRN 124
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 65.3 bits (152), Expect = 7e-12
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
K V+VGDG GKT+ + G F +YV T+ E + + ++ +WDTAGQE+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTV-FENYVSDCRVDGKSVQLALWDTAGQEE 68
Query: 316 FGGLXDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKDRK 492
+ L Y + ++ F + S + +NV W ++ +C +P +L G K D++
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDP 128
Query: 493 V 495
V
Sbjct: 129 V 129
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 63.7 bits (148), Expect = 2e-11
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 312
K V++GDG GKT+ + G F + Y T+ +H + N I ++WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNS--IELSLWDTAGQE 72
Query: 313 KFGGLXDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIK-- 483
++ L Y +I F V SR + +NV W ++ C G+ +VL K D++
Sbjct: 73 EYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGA 132
Query: 484 -DRKVXAKTIVFH-------RKKN-LQYYDISAKSNYNFEKPFLWLAR 600
+ +V I+ + +K N ++Y + SAK N + F AR
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 61.3 bits (142), Expect = 1e-10
Identities = 30/116 (25%), Positives = 52/116 (44%)
Frame = +1
Query: 130 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQ 309
T K ++GD GKT+ + ++ G F+++ TLGV I F++WD GQ
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 310 EKFGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 477
+F + + MFD++ + T ++ W+R + +L G K D
Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYD 125
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 60.5 bits (140), Expect = 2e-10
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
K V+VGDG GKT + G F + YV T+ E + + + +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWDTAGQED 66
Query: 316 FGGLXDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKD 486
+ L Y +I F V S + NV W +++ C +PI+L K D+++
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRN 124
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 39.5 bits (88), Expect = 4e-04
Identities = 28/100 (28%), Positives = 44/100 (44%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
+ ++VG GKTT + + GE + T+G V + + I F VWD GQ+K
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYRN----ISFTVWDVGGQDK 73
Query: 316 FGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV 435
L Y+ Q I + D R + + H +L R+
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDR---ERISEAHEELQRM 110
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 39.1 bits (87), Expect = 6e-04
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
+ ++G GK++ +++ F + Y T+ + + + + DTAGQ++
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQ-EFATEIIDTAGQDE 66
Query: 316 FGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR--VCEGIPIVLCGNKVDI-KD 486
+ L + I ++++ +TS+ +++ V ++ E +PIV+ GNK D+
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 487 RKVXAKT-IVFHRKKNLQYYDISAKSNYNFEKPF 585
R V A+ + + + SA+ N N + F
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAF 160
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 38.7 bits (86), Expect = 7e-04
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 8/165 (4%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
+ +L+G GKTT +K L E + T G ++ L +RF +WD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKC-LLNEDVNEVSPTFGFQIRTLEVEG----LRFTIWDIGGQKT 72
Query: 316 FGGLXDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGI---PIVLCGNKVDIK- 483
Y+ + I + D + + N ++L+ V E + I++ NK D+
Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL-VEEKLLFTSILVLANKSDVSG 131
Query: 484 --DRKVXAKTIVFHRKKNLQY--YDISAKSNYNFEKPFLWLARKL 606
+ +K + + K+ + + +SA + N + WLA L
Sbjct: 132 ALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL 176
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.5 bits (73), Expect = 0.027
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
+ +++G GKTT + + + + T+G V + + I+FNVWD GQ+K
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVETVTYKN----IKFNVWDVGGQDK 77
Query: 316 FGGLXDGYYIQGQCAIIMFD 375
L Y+ + I + D
Sbjct: 78 IRPLWRHYFTGTKGLIFVVD 97
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 33.1 bits (72), Expect = 0.036
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN-RGPIRFNVWDTAGQE 312
K +L+G G+GK++ ++ + + K LG + H G + N+WD GQE
Sbjct: 4 KVLLMGRSGSGKSS-MRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQE 62
Query: 313 KF-----GGLXDGYYIQGQCAIIMFDVTSR 387
F D + Q I +FDV SR
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESR 92
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 29.1 bits (62), Expect = 0.59
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 142 VLVGDGGTGKTTFVKR---HLTGEFEKKYVATLGVEVHPLVFHTN 267
++VG G+GKTTF+++ HL + + Y+ L V L + N
Sbjct: 12 IVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEAN 56
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 174 CF-ASTTISYQYTLECGHIICHFRCFIAILLRELYKKIE 61
CF + I+Y L C H +CH C A+ LR LYK E
Sbjct: 81 CFICAEGITYSCVLPCNHRMCHV-C--ALRLRALYKTKE 116
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 27.9 bits (59), Expect = 1.4
Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = +1
Query: 136 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 315
K + +G GKTT + H+ + +A + +HP G +RF +D G ++
Sbjct: 22 KMLFLGLDNAGKTTLL--HM---LKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQ 76
Query: 316 FGGLXDGYYIQGQCAIIMFDVT--SRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 477
L Y+ + + + D R++ + +P ++ GNK+D
Sbjct: 77 ARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKID 132
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 142 VLVGDGGTGKTTFVK 186
VL+G+ GTGKTTF K
Sbjct: 379 VLLGENGTGKTTFCK 393
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 381 GYVEHDDSTLSLNIVSVXKTTKLLLSGCVPHIKTNWPA-VRMEY*RMYFDTQS 226
G ++ D T + I+S + T + GC P+ KTNW +Y R+ D +S
Sbjct: 393 GEPQNVDETRASEILSQDELTVDVDLGCGPYAKTNWTCDFSYDYVRINADYRS 445
>SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein
L9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 463 GNKVDIKDRKVXAKTIVFHRKKNLQYYDISAKSNYNFEKPFLW 591
G VDIK R V K+NL++ DI K N K +W
Sbjct: 16 GVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNTIKFIVW 58
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 331 DGYYIQGQCAIIMFDVTSRVTYKNVP 408
D Y G+C+ M +++ V YKN P
Sbjct: 53 DSRYADGRCSAAMRSLSNYVLYKNNP 78
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 25.4 bits (53), Expect = 7.3
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 529 NLQYYDISAKSNYNFEKPFLWL 594
N+ Y +I++K NY+ + + WL
Sbjct: 244 NMPYIEITSKHNYDIDFKYKWL 265
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 7.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 139 CVLVGDGGTGKTTFVK 186
C+LVGD TGKT ++
Sbjct: 1872 CILVGDTATGKTCILR 1887
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 257 NTRGCTSTPRVATYFFSNSPVKCLLTKVVLPVPPSPTNTHLN 132
+T+ TSTP V S + C L +V PP+ TNT L+
Sbjct: 45 STKASTSTPFVENC----SNLLCDLASIVEDSPPTLTNTSLS 82
>SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 256
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 488 LSLISTLFPHKTIGIPSHTRTKSLCQLGTFLYVTREVT 375
L+ + P T+ P H TKS + + ++ T E+T
Sbjct: 161 LNHVLAALPDDTVTYPGHEYTKSNAKFSSTIFSTPELT 198
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 335 PSXRPPNFSCPAVSHTLKRIGPRFVW 258
P PN + P V HT+ R P +W
Sbjct: 163 PEDTKPNTNSPPVYHTVLRPTPETLW 188
>SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 527 FFLWKTIVFALTFLSLISTLFPHKTIGIPS 438
F LW V+ ++ +SL ++ FPH + + S
Sbjct: 11 FNLWSHGVYKISSISLSNSFFPHSFMFVKS 40
>SPAC22F3.12c |rgs1||regulator of G-protein signaling
Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -2
Query: 283 NELARGSYG--ILEDVLRHPESQRIFSRTLQSN 191
NE+ +GS ILE +LR P Q F L+ N
Sbjct: 333 NEVEKGSTNKEILETILRKPNLQTYFFEFLKKN 365
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 142 VLVGDGGTGKTTFVKRHLTGE 204
VL+G+ G+GKTT + ++L E
Sbjct: 530 VLLGETGSGKTTQITQYLAEE 550
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,840,610
Number of Sequences: 5004
Number of extensions: 60713
Number of successful extensions: 260
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -