Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_J01
         (331 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   6.9  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            21   9.1  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 168 HQHHXTSIPLDFYSHSWN 221
           H HH T+  L  Y H  N
Sbjct: 509 HHHHPTAADLAGYHHQHN 526


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 214 RGTKSLQQ*VRVXRSHGLRPSI 279
           RG   L + ++  R+ GL+PSI
Sbjct: 226 RGLTHLHEEIQSSRTDGLKPSI 247


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,685
Number of Sequences: 2352
Number of extensions: 6201
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)