Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_I24
(514 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85; ... 116 3e-25
UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16; ... 116 3e-25
UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13; ... 113 2e-24
UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10; ... 105 6e-22
UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3; E... 105 6e-22
UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33... 100 4e-20
UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3; C... 95 6e-19
UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1; ... 93 3e-18
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 90 2e-17
UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putati... 81 1e-14
UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1; ... 80 3e-14
UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3; E... 79 6e-14
UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora in... 77 2e-13
UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15... 76 5e-13
UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7; E... 76 5e-13
UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, wh... 75 1e-12
UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;... 74 2e-12
UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein; ... 74 2e-12
UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lambl... 68 1e-10
UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89 prot... 65 8e-10
UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059; ... 64 2e-09
UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;... 63 3e-09
UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4; Tric... 62 5e-09
UniRef50_P23632 Cluster: 60S acidic ribosomal protein P2-A; n=9;... 62 5e-09
UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic... 60 3e-08
UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1; ... 58 9e-08
UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;... 58 1e-07
UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=... 58 2e-07
UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;... 49 5e-05
UniRef50_UPI0000F2C139 Cluster: PREDICTED: hypothetical protein;... 37 5e-04
UniRef50_UPI0000F2D36E Cluster: PREDICTED: hypothetical protein;... 46 7e-04
UniRef50_A0EGR2 Cluster: Chromosome undetermined scaffold_96, wh... 45 9e-04
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 42 0.006
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 41 0.014
UniRef50_Q8CHJ1-2 Cluster: Isoform 2 of Q8CHJ1 ; n=1; Rattus nor... 41 0.019
UniRef50_Q7QU71 Cluster: GLP_226_29764_29144; n=1; Giardia lambl... 40 0.044
UniRef50_Q8SRM2 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P2; n=1; E... 39 0.058
UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, wh... 38 0.10
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 38 0.13
UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF5... 37 0.31
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 37 0.31
UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal ... 36 0.54
UniRef50_A4X4V1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.54
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 36 0.54
UniRef50_UPI000155BA8E Cluster: PREDICTED: hypothetical protein;... 36 0.72
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 36 0.72
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 36 0.72
UniRef50_UPI0000F2D396 Cluster: PREDICTED: similar to nucleolar ... 35 0.95
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 35 0.95
UniRef50_Q9NQ27 Cluster: Putative uncharacterized protein; n=2; ... 35 1.2
UniRef50_P53214 Cluster: Protein MTL1 precursor; n=2; Saccharomy... 35 1.2
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 33 2.9
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 33 3.8
UniRef50_A5FKG8 Cluster: Peptidase S41; n=1; Flavobacterium john... 33 3.8
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 33 3.8
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 33 3.8
UniRef50_A5DD47 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q5T6F2 Cluster: Ubiquitin-associated protein 2; n=22; E... 33 3.8
UniRef50_A2WTB1 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 33 5.0
UniRef50_Q6VBJ3 Cluster: Epa4p; n=6; Fungi/Metazoa group|Rep: Ep... 33 5.0
UniRef50_Q5AZ50 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_Q2U9T4 Cluster: Predicted protein; n=1; Aspergillus ory... 33 5.0
UniRef50_A2QA67 Cluster: Contig An01c0330, complete genome; n=1;... 33 5.0
UniRef50_Q6Q324 Cluster: Acyl-CoA:cholesterol acyltransferase al... 32 6.7
UniRef50_Q5A738 Cluster: Potential Hyr1-like cell wall protein; ... 32 6.7
UniRef50_Q0U9R7 Cluster: Putative uncharacterized protein; n=1; ... 32 6.7
UniRef50_UPI0001555A46 Cluster: PREDICTED: similar to high molec... 32 8.8
UniRef50_A3DH59 Cluster: Small GTP-binding protein; n=8; Bacteri... 32 8.8
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 32 8.8
>UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85;
Eukaryota|Rep: 60S acidic ribosomal protein P2 - Mus
musculus (Mouse)
Length = 115
Score = 116 bits (279), Expect = 3e-25
Identities = 61/118 (51%), Positives = 77/118 (65%), Gaps = 6/118 (5%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVG 60
Query: 262 KLSSMPVGGGXXXXXX------XXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KL+S+P GG EE K + K +E ESDDDMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKK---EESEESDDDMGFGLFD 115
>UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16;
Bilateria|Rep: 60S acidic ribosomal protein P2 - Homo
sapiens (Human)
Length = 115
Score = 116 bits (279), Expect = 3e-25
Identities = 61/118 (51%), Positives = 77/118 (65%), Gaps = 6/118 (5%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 262 KLSSMPVGGGXXXXXX------XXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KL+S+P GG EE K + K +E ESDDDMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKK---EESEESDDDMGFGLFD 115
>UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Alternaria alternata (Alternaria rot fungus)
Length = 113
Score = 113 bits (272), Expect = 2e-24
Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+++AAYLL LGG T+P+AADV+ +L SVGIEAD ++L K+I+EL GKD+ +LIA+G E
Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSE 60
Query: 262 KLSSMPVGG-GXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KL+S+P GG G + +E ESD+DMGFGLFD
Sbjct: 61 KLASVPSGGAGGAAASGGAAAAGGSAQAEAAPEAAKEEEKEESDEDMGFGLFD 113
>UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Cladosporium herbarum (Davidiella tassiana)
Length = 111
Score = 105 bits (252), Expect = 6e-22
Identities = 50/112 (44%), Positives = 71/112 (63%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+AAYLL L G ++P+A D++ +LSSVGI+AD E+L ++ EL GKD+ +LI++G +
Sbjct: 1 MKYMAAYLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQ 60
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KL+S+P GG E + +E ESDDDMGFGLFD
Sbjct: 61 KLASVPSGGSGAAPSAGGAAAAGGATEAAPEA-AKEEEKEESDDDMGFGLFD 111
>UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Rhodotorula glutinis (Yeast)
Length = 110
Score = 105 bits (252), Expect = 6e-22
Identities = 54/112 (48%), Positives = 72/112 (64%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M++VAAYLL V G T+P+A DV+K+L++ I+AD E+L +I EL GKDV ++IA G +
Sbjct: 1 MKHVAAYLLLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSK 60
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KL+S+P GG EE K + K K+ ESDDDMGFGLFD
Sbjct: 61 KLASVPSGGAAPAAAAGGAAAGGAAEE-KAEDKPAEKD-EESDDDMGFGLFD 110
>UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33;
Eukaryota|Rep: 60S acidic ribosomal protein P2-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 99.5 bits (237), Expect = 4e-20
Identities = 49/113 (43%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+ AA+LLAVLGG P+A +++ I+ +VG + DGE ++ ++ E++GKD+ +LIA+GRE
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60
Query: 262 KLSSMPVGGGXXXXXX-XXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KL+S+P GGG K + K KE ESDDDMGF LF+
Sbjct: 61 KLASVPSGGGVAVSAAPSSGGGGAAAPAEKKEAKKEEKE--ESDDDMGFSLFE 111
>UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3;
Chromadorea|Rep: 60S acidic ribosomal protein P2 -
Caenorhabditis elegans
Length = 107
Score = 95.5 bits (227), Expect = 6e-19
Identities = 51/112 (45%), Positives = 65/112 (58%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+ AYLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KLSS+P GG EE K K KE ESDDDMGFGLFD
Sbjct: 61 KLSSVPSGGSAPAAAAPSGGAAPKAEEKK---KEEPKE--ESDDDMGFGLFD 107
>UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1;
Solanum tuberosum|Rep: Putative uncharacterized protein
- Solanum tuberosum (Potato)
Length = 162
Score = 93.1 bits (221), Expect = 3e-18
Identities = 40/70 (57%), Positives = 60/70 (85%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+ +AAYLLAVLGG T P+ D++KIL+SVG EAD ++++ ++++++GKD+ +LIAAGRE
Sbjct: 1 MKVIAAYLLAVLGGNTCPSEKDLKKILASVGAEADDDRIQLLLSQVDGKDITELIAAGRE 60
Query: 262 KLSSMPVGGG 291
KL+S+P GGG
Sbjct: 61 KLASVPAGGG 70
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 90.2 bits (214), Expect = 2e-17
Identities = 48/112 (42%), Positives = 63/112 (56%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+AAYLL G T P A ++ IL SVGIE + EK+ V++ L GK V++LI G E
Sbjct: 1 MKYLAAYLLLNAAGNT-PDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNE 59
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KL+++P G EE K + + ESDDDMGFGLFD
Sbjct: 60 KLAAVPAAGPASAGGAAAASGDAAAEEEKEE-----EAAEESDDDMGFGLFD 106
>UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein p2,
putative - Theileria annulata
Length = 110
Score = 81.4 bits (192), Expect = 1e-14
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
++YVA+YLLAV G +P+ DV +L+SVG E D + L + ++GK V + I+AG +
Sbjct: 3 LKYVASYLLAVTCGNESPSKDDVRDVLNSVGSEVDEDALSAFFSAVSGKVVHETISAGLD 62
Query: 262 KLSSMPVGGG-XXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KL ++P GGG EE K + E E +DDMGF LFD
Sbjct: 63 KLQTLPAGGGVSVASTVQASGSSEKQEEAKKEA-----EPEEEEDDMGFSLFD 110
>UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1;
Pectinaria gouldii|Rep: Putative uncharacterized protein
- Pectinaria gouldii (Trumpet worm) (Ice-cream cone
worm)
Length = 118
Score = 80.2 bits (189), Expect = 3e-14
Identities = 42/69 (60%), Positives = 50/69 (72%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
MRYVAAYLLA LGG A ++ IL SVGI+AD EKL KVI EL GKD+ ++IAA
Sbjct: 1 MRYVAAYLLAALGGNNNVDAKAIKGILGSVGIDADDEKLNKVIAELKGKDIAEVIAAD-A 59
Query: 262 KLSSMPVGG 288
KL+S+P GG
Sbjct: 60 KLASVPSGG 68
>UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3;
Euplotes|Rep: 60S acidic ribosomal protein P2 - Euplotes
raikovi
Length = 113
Score = 79.0 bits (186), Expect = 6e-14
Identities = 39/107 (36%), Positives = 61/107 (57%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+AAY L VLGG ++P+A DV+K+L SVG++++ +KL ++ L GK + +LI AG
Sbjct: 1 MKYIAAYALLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSS 60
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMG 402
K+SS+ G G E K + + E+D +MG
Sbjct: 61 KVSSLSAGAGPSGGAAAAGADAGAAEAEKEE----EPQEEEADVNMG 103
>UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora
infestans|Rep: Ribosomal protein - Phytophthora
infestans (Potato late blight fungus)
Length = 135
Score = 77.0 bits (181), Expect = 2e-13
Identities = 38/69 (55%), Positives = 46/69 (66%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
MRY+AAYLLAVLGG TTP DVEKIL S +E D ++ VI + GK E++IAAG E
Sbjct: 1 MRYIAAYLLAVLGGHTTPTENDVEKILKSSDVEVDKARVAAVIKAMEGKTAEEVIAAGSE 60
Query: 262 KLSSMPVGG 288
KL+ G
Sbjct: 61 KLAKFGSAG 69
>UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P2-B -
Trypanosoma cruzi
Length = 112
Score = 75.8 bits (178), Expect = 5e-13
Identities = 43/112 (38%), Positives = 55/112 (49%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+AAY LA L K TP AADVE I + GIE + + L V+ + G+ V L+A G
Sbjct: 3 MKYLAAYALASLN-KPTPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAA 61
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
K+S++ V KE E DDDMGFGLFD
Sbjct: 62 KMSAVAVSAAPAAGDAAAPAAAAGGAAAPA-AADAKKEEEEEDDDMGFGLFD 112
>UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Plasmodium falciparum
Length = 112
Score = 75.8 bits (178), Expect = 5e-13
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+YVAAYL+ VLGG P+ +V+ +L +V + + E L I L GK +LI G +
Sbjct: 3 MKYVAAYLMCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDGLK 62
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXK-EXSESDDDMGFGLF 414
KL ++ GG E K D K K E E +DD+GF LF
Sbjct: 63 KLQNI---GGGVAAAPAGAAAVETAEAKKEDKKEEKKEEEEEEEDDLGFSLF 111
>UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 113
Score = 74.5 bits (175), Expect = 1e-12
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+AAY L VLGG P D+ K+L G+E+ +K V++ L GK++ +I G++
Sbjct: 1 MKYIAAYALLVLGGNNAPTEDDITKLLKEAGVESVAADVKNVVSTLKGKNLNDVIKEGQK 60
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXK--EXSESDDDMGFGLFD 417
+L+S+ VGGG + K E E D DMG GLFD
Sbjct: 61 QLTSLSVGGGAQQSSAPAPQATTAAQTAPAAKVEPPKKAEEPEEDVDMG-GLFD 113
>UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;
Eukaryota|Rep: 60S acidic ribosomal protein P2-2 -
Leishmania infantum
Length = 111
Score = 74.1 bits (174), Expect = 2e-12
Identities = 43/111 (38%), Positives = 56/111 (50%)
Frame = +1
Query: 85 RYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREK 264
+Y+AAY LA L K +P+ ADVE I +V I+ D L V+ + G+DV LIA G K
Sbjct: 4 KYLAAYALASLS-KASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAK 62
Query: 265 LSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
+S+MP K +E E+DDDMGFGLFD
Sbjct: 63 MSAMPAASSGAAAGVTASAAGDAAPAAAAAKKDEPEE--EADDDMGFGLFD 111
>UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein;
n=4; Oryza sativa|Rep: Putative 60S acidic ribosomal
protein - Oryza sativa subsp. japonica (Rice)
Length = 167
Score = 73.7 bits (173), Expect = 2e-12
Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = +1
Query: 55 RFVSI-RT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKD 231
R SI R MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD
Sbjct: 49 RLASIQRRQTMRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKD 108
Query: 232 VEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGL 411
+ +++AAG E L+ G E + + K KE E +DD+ F L
Sbjct: 109 LAEILAAGSEMLAF----GAAPAAAAATAGGAAAAGEKEEEEKVEEKE-KEGEDDIVFSL 163
Query: 412 FD 417
FD
Sbjct: 164 FD 165
>UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29574_29942 - Giardia lamblia
ATCC 50803
Length = 122
Score = 68.1 bits (159), Expect = 1e-10
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITEL--NGKDVEQLIAAG 255
M+++AAYLLA +GGK PA AD+EKI+++VG D + K V+ ++ G VE L++ G
Sbjct: 1 MKHLAAYLLAKMGGKNEPAVADIEKIIAAVGGTTDADLAKTVVEKVGAGGLSVEDLMSLG 60
Query: 256 REKLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFG 408
+++++SMP G E K KE S+ D+ +G G
Sbjct: 61 KKRMASMPAVG---AAPAAASTAAAVAEAAPAAAK---KEESDDDEIVGAG 105
>UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89
protein; n=4; Monodelphis domestica|Rep: PREDICTED:
similar to Wdr89 protein - Monodelphis domestica
Length = 72
Score = 65.3 bits (152), Expect = 8e-10
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +1
Query: 91 VAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLS 270
+A Y LAVLG +P + DV+KIL ++ I+AD E+L KVI N K++E LI+ G KL
Sbjct: 1 MATYFLAVLGSNDSPNSKDVKKILGNINIKADEERL-KVIGNFNSKNIEDLISQGSNKLD 59
Query: 271 SMPVG 285
SMP G
Sbjct: 60 SMPNG 64
>UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 12.t00059 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 63.7 bits (148), Expect = 2e-09
Identities = 36/109 (33%), Positives = 57/109 (52%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+AAY+L +G + A V++IL++ G E D K+K+V +NGK+V ++I AG++
Sbjct: 1 MQYIAAYILCTIGHENAEEAK-VKEILTAAGAEIDEAKIKQVFDAMNGKNVWEVIEAGKK 59
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFG 408
++ SM V E+ K KE E +D GFG
Sbjct: 60 QMGSMAVAAAAPAAGAAAQTETKAEEK-----KEEKKEEEEEEDFGGFG 103
>UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 138
Score = 63.3 bits (147), Expect = 3e-09
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVI 210
MRYVAAYLLAVLGG +P + D++KIL SVGIE D E+L KV+
Sbjct: 1 MRYVAAYLLAVLGGNESPTSKDLKKILDSVGIETDDERLNKVV 43
>UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 106
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/93 (31%), Positives = 49/93 (52%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+AAYLL+ G P V+KIL + G+E D +L+ V+T+++ K V++L+ G+
Sbjct: 1 MKYIAAYLLSKAAGNEKPTQEQVKKILEAAGVEVDAAQLEAVVTKMSEKSVDELVETGKT 60
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXK 360
+++ VGG E K + K
Sbjct: 61 EMNK--VGGAAPAAGAAAAAPAAAAEAPKEEAK 91
>UniRef50_P23632 Cluster: 60S acidic ribosomal protein P2-A; n=9;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P2-A
- Trypanosoma cruzi
Length = 107
Score = 62.5 bits (145), Expect = 5e-09
Identities = 36/112 (32%), Positives = 49/112 (43%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+AAY L L G T P+ + VE +L + G+ D ++ + E GKD + + G+
Sbjct: 1 MKYLAAYALVGLSGGT-PSKSAVEAVLKAAGVPVDPSRVDALFAEFAGKDFDTVCTEGKS 59
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KL VGG E DDDMGFGLFD
Sbjct: 60 KL----VGGVTRPNAATASAPTAAAAASSGAAAPAAAAEEEEDDDMGFGLFD 107
>UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P2 (NY-REN-44 antigen); n=5;
Mammalia|Rep: PREDICTED: similar to 60S acidic ribosomal
protein P2 (NY-REN-44 antigen) - Homo sapiens
Length = 81
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/54 (51%), Positives = 41/54 (75%)
Frame = +1
Query: 127 TTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 288
T+ +A D++KIL VG+EA + L KVI+ELNGK++E +IA G +L+S+P GG
Sbjct: 4 TSLSAKDIKKILDRVGMEATDDWLNKVISELNGKNIEDIIAQGIGELASVPAGG 57
>UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 102
Score = 58.4 bits (135), Expect = 9e-08
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AA RE
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAA-RE 59
Query: 262 K 264
+
Sbjct: 60 R 60
>UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 74
Score = 58.0 bits (134), Expect = 1e-07
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M Y+AAYLLAVL +P ++KILSS+G EA+ E L KVI + N K+ E++I
Sbjct: 1 MHYMAAYLLAVLSSNKSPNCRHLKKILSSIGTEAEAEWL-KVIGKFNIKNTEEVILQESS 59
Query: 262 KLSSM 276
KL+SM
Sbjct: 60 KLASM 64
>UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 131
Score = 57.6 bits (133), Expect = 2e-07
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +1
Query: 79 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR 258
KM+YVAAY L L G + P+ ADV+ ++ SV D KL + + GK++E +I AG
Sbjct: 23 KMKYVAAYALLALNG-SQPSEADVKALIESVNGTVDATKLSSFMNVIKGKNIEDVIKAGL 81
Query: 259 EKLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFG-LFD 417
K+ + +GG E K + + E DD G G LFD
Sbjct: 82 SKVGN--IGG---AAPAAAPAAATKAPEAKKEEPKKEEPKKEEDDFEGAGDLFD 130
>UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 154.t00025 - Entamoeba histolytica HM-1:IMSS
Length = 109
Score = 49.2 bits (112), Expect = 5e-05
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+AAY+L +G + A V++ILS+ G E D K+K+V +NGK+V ++I R
Sbjct: 1 MQYIAAYILCTIGHEHAEEAK-VKEILSAAGAEIDEAKIKEVFDAMNGKNVWEVIELERN 59
Query: 262 K 264
K
Sbjct: 60 K 60
>UniRef50_UPI0000F2C139 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 87
Score = 37.1 bits (82), Expect(2) = 5e-04
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M Y AAYLLAVL + + D EK S++ G + K +E LI R
Sbjct: 1 MHYEAAYLLAVLDSNDSLISKDWEKTASALRQIKSGSRSS---ASSAAKTMEDLIVQRRS 57
Query: 262 KLSSMPVG 285
KL+S P+G
Sbjct: 58 KLTSTPMG 65
Score = 28.7 bits (61), Expect(2) = 5e-04
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
ES+DDMGFGLFD
Sbjct: 76 ESNDDMGFGLFD 87
>UniRef50_UPI0000F2D36E Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 88
Score = 45.6 bits (103), Expect = 7e-04
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKV 207
M Y AAYLLAVLG P + D++KI + G+EAD E LK +
Sbjct: 1 MHYEAAYLLAVLGSNDCPNSKDLKKIQDNFGLEADEEWLKAI 42
>UniRef50_A0EGR2 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 124
Score = 45.2 bits (102), Expect = 9e-04
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 88 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 267
YVA Y L +LGG +P DV +L IE + +++ +I L KD+ Q+I G+ K+
Sbjct: 60 YVATYALLLLGGNKSPTMYDVAYVLRQADIEPNLPEIEALIKSLKYKDLNQVIKEGKLKM 119
Query: 268 SSM 276
+
Sbjct: 120 PQL 122
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 42.3 bits (95), Expect = 0.006
Identities = 31/108 (28%), Positives = 48/108 (44%)
Frame = +1
Query: 94 AAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSS 273
AA++LA G + T + ++ I + G D L GKD++++++ ++
Sbjct: 9 AAFILADAGLEIT--SDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFH---NA 63
Query: 274 MPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
PV G EE K + + ESDDDMGFGLFD
Sbjct: 64 GPVAGAGAASGAAAAGGDAAAEEEKEE-----EAAEESDDDMGFGLFD 106
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 41.1 bits (92), Expect = 0.014
Identities = 26/90 (28%), Positives = 37/90 (41%)
Frame = +1
Query: 148 VEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXX 327
+ IL + +E + L G +V+ LI + + P GG
Sbjct: 28 INTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAE 87
Query: 328 XXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
EE K + +E +SDDDMGFGLFD
Sbjct: 88 SKKEEKKKE-----EESDQSDDDMGFGLFD 112
>UniRef50_Q8CHJ1-2 Cluster: Isoform 2 of Q8CHJ1 ; n=1; Rattus
norvegicus|Rep: Isoform 2 of Q8CHJ1 - Rattus norvegicus
(Rat)
Length = 107
Score = 40.7 bits (91), Expect = 0.019
Identities = 20/55 (36%), Positives = 37/55 (67%)
Frame = +1
Query: 49 ITRFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVIT 213
+ F+S R + ++++ A L G ++P+A D++KIL S+GI+ G++L KV+T
Sbjct: 24 LAEFISERVEVVSPLSSWKRA-LRGNSSPSAKDIKKILDSMGIKVGGDQLNKVVT 77
>UniRef50_Q7QU71 Cluster: GLP_226_29764_29144; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29764_29144 - Giardia lamblia
ATCC 50803
Length = 206
Score = 39.5 bits (88), Expect = 0.044
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 254 PAAISCSTSLPLSSVITFLSFSPSASI--PTELRIFSTSAAAGVVLPPSTASKYAA 93
P + ST P + + F+ SAS+ PT IFS SA AG LPP A +YAA
Sbjct: 5 PRLMRSSTERPPAPTFSTTVFARSASVVPPTAAIIFSMSATAGSFLPPILARRYAA 60
>UniRef50_Q8SRM2 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P2; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P2 - Encephalitozoon cuniculi
Length = 103
Score = 39.1 bits (87), Expect = 0.058
Identities = 17/67 (25%), Positives = 42/67 (62%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M YVAAY++ GK + E + + +G E + E ++ +++++GK ++++++ G+E
Sbjct: 1 MEYVAAYVMFDKVGKELNERSMTE-LFNEIGAEIEPETMRLFLSKVSGKSMDEVMSKGKE 59
Query: 262 KLSSMPV 282
++S+ +
Sbjct: 60 LMASLAI 66
>UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_25,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 151
Score = 38.3 bits (85), Expect = 0.10
Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 1/108 (0%)
Frame = +1
Query: 97 AYLLAVLGGKTTPAAAD-VEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSS 273
AY +L G TP AD VEK+ G+ + + GKD+ L++ G
Sbjct: 54 AYAALLLAGSNTPLTADNVEKLTKKAGVNVPKQLAAAFVKAFEGKDILSLLSVGG----- 108
Query: 274 MPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
G G E K K E E D DMG GLFD
Sbjct: 109 ---GQGSAPAAQTTQAAAKPAEAPKAVEKPKDPE-PEEDVDMG-GLFD 151
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 37.9 bits (84), Expect = 0.13
Identities = 23/67 (34%), Positives = 29/67 (43%)
Frame = +1
Query: 217 LNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDD 396
L GKDV+ L+ + P GG E+ + +E ESDDD
Sbjct: 51 LEGKDVKDLLLNVGSGGGAAPAAGGAAAGGAAAVLDAPAEEKAE-------EEKEESDDD 103
Query: 397 MGFGLFD 417
MGFGLFD
Sbjct: 104 MGFGLFD 110
>UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF54;
n=1; Ignicoccus hospitalis KIN4/I|Rep: Protein of
unknown function DUF54 - Ignicoccus hospitalis KIN4/I
Length = 147
Score = 36.7 bits (81), Expect = 0.31
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 109 AVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 288
A G + A DVE L ++ +E + E +KKVI L GK+ E +GR++ SS+ G
Sbjct: 91 AAYAGTPSLAEEDVESPLGAITVEVEAEDVKKVIAWLTGKEGE---VSGRDEDSSVRQNG 147
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 36.7 bits (81), Expect = 0.31
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +1
Query: 277 PVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
P G EE K + K +E ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal
protein P1; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein P1 - Equus caballus
Length = 125
Score = 35.9 bits (79), Expect = 0.54
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +1
Query: 277 PVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
P G EE K + K +E ESDDDMGFGLFD
Sbjct: 81 PPAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 125
>UniRef50_A4X4V1 Cluster: Putative uncharacterized protein; n=1;
Salinispora tropica CNB-440|Rep: Putative uncharacterized
protein - Salinispora tropica CNB-440
Length = 3437
Score = 35.9 bits (79), Expect = 0.54
Identities = 32/109 (29%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Frame = -3
Query: 410 RPKPMXXXXXXXXXXSXXLSSXFS-SXXXXXXXXXXXXXXAPPPTGIDDSFSRPAAISCS 234
RP P S S+ S S A P S PA+ S S
Sbjct: 1137 RPSPGAPDVDADVATSASTSASASTSASASTSASASTSASASTPASTSTPASTPASASTS 1196
Query: 233 TSLPLSSVITFLSFSP-SASIPTELRIFSTSAAAGVVLPPSTASKYAAT 90
TS P S+ + + +P SAS PT STS +A P ST++ A+
Sbjct: 1197 TSTPASAPTSTSASTPRSASAPT-----STSTSASASTPASTSTPAPAS 1240
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 35.9 bits (79), Expect = 0.54
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 2/115 (1%)
Frame = +1
Query: 79 KMRYVAAYLLAVLGGKTTPAAAD-VEKILSSVGIEADGEKLKKVI-TELNGKDVEQLIAA 252
K Y +L AD + IL + I+ L + T LNGK+V+ L+ +
Sbjct: 3 KSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLLMS 62
Query: 253 GREKLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
S V +E + K + +SD+ +GFGLFD
Sbjct: 63 MGSPAPSAAVTSAVPTAASATSAAAEKPKEAVKEEKKVVSD-DDSDESIGFGLFD 116
>UniRef50_UPI000155BA8E Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 108
Score = 35.5 bits (78), Expect = 0.72
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 337 EEXKXDXKXXXKEXSESDDDMGFGLFD 417
EE K + K +E ESDDDMGFGLFD
Sbjct: 84 EEKKEEAKK--EESEESDDDMGFGLFD 108
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 35.5 bits (78), Expect = 0.72
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Frame = +1
Query: 91 VAAYLLAVLGGKTTPAAAD-VEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 267
+ +Y VL P ++ ++KI+S+ G + L+ +V ++A
Sbjct: 18 ICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAGCGAAS 77
Query: 268 SSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
++PV GG D K +E E + D+GF LFD
Sbjct: 78 VAVPVAGGAGAGAGAAQDSGASAA---ADDKKKKEEEEEEEGDLGFSLFD 124
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 35.5 bits (78), Expect = 0.72
Identities = 25/87 (28%), Positives = 35/87 (40%)
Frame = +1
Query: 157 ILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXX 336
+++ +E +G L GKD+++ S+ P
Sbjct: 29 LVTKANVEVEGIWADLFAKALEGKDLKEFFF----NFSAAPAAAAAGGAAGGGAAAEEAA 84
Query: 337 EEXKXDXKXXXKEXSESDDDMGFGLFD 417
EE K + KE ESDDDMGFGLFD
Sbjct: 85 EEEKEEE---AKE--ESDDDMGFGLFD 106
>UniRef50_UPI0000F2D396 Cluster: PREDICTED: similar to nucleolar
protein 9; n=3; Amniota|Rep: PREDICTED: similar to
nucleolar protein 9 - Monodelphis domestica
Length = 889
Score = 35.1 bits (77), Expect = 0.95
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +1
Query: 67 IRT*KMRYVAAY--LLAVLGGKTTPAAADVEKI-LSSVGIEADGEKLKKVITELNGKDVE 237
+ T M +V +Y + GK ++ +E++ +SSVGI+ GE+ ++E + +E
Sbjct: 428 LETPAMDFVLSYPAFSHLFSGKVETSSYTLEQLTVSSVGIKKCGEESGFHLSESSSSAIE 487
Query: 238 QLIAAGREKLSSMPV 282
+LI A RE++ P+
Sbjct: 488 ELITACREEIDGCPI 502
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 35.1 bits (77), Expect = 0.95
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 217 LNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXK-EXSESDD 393
L GKD+E L LS++ VGGG ++ K D K K E E +D
Sbjct: 61 LKGKDIEGL-------LSNLSVGGGAPAAAAQVATENA--DDGKKDSKKEEKVEEEEEED 111
Query: 394 DMGFGLF 414
D+GF LF
Sbjct: 112 DLGFSLF 118
>UniRef50_Q9NQ27 Cluster: Putative uncharacterized protein; n=2;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 264
Score = 34.7 bits (76), Expect = 1.2
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +2
Query: 128 PRQLPLTLRRS-----SAPSVSKLTVRSLRK*SLSSTARMLNNLLRPDVRSCRQC 277
P QLPL+LRR S PS S +RSL S +S++R + RSC +C
Sbjct: 66 PAQLPLSLRRRCSRPRSRPSSSSRAIRSLWSRSRTSSSRWFTSDTSSSSRSCSRC 120
>UniRef50_P53214 Cluster: Protein MTL1 precursor; n=2; Saccharomyces
cerevisiae|Rep: Protein MTL1 precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 551
Score = 34.7 bits (76), Expect = 1.2
Identities = 31/124 (25%), Positives = 46/124 (37%), Gaps = 1/124 (0%)
Frame = -3
Query: 458 TGIATSAAYF-CKV*SKRPKPMXXXXXXXXXXSXXLSSXFSSXXXXXXXXXXXXXXAPPP 282
T ++TS+ Y S P S S+ FS +
Sbjct: 196 TSVSTSSVYVPSSSTSSPPSSSSELTSSSYSSSSSSSTLFSYSSSFSSSSSSSSSSSSSS 255
Query: 281 TGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASK 102
+ S S +S S+S + S ++ SFS S+S I STSA++ + P S S
Sbjct: 256 SSSSSSSSSYFTLSTSSSSSIYSSSSYPSFSSSSSSNPTSSITSTSASSSIT-PASEYSN 314
Query: 101 YAAT 90
A T
Sbjct: 315 LAKT 318
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 33.5 bits (73), Expect = 2.9
Identities = 24/113 (21%), Positives = 35/113 (30%)
Frame = +1
Query: 79 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR 258
K + Y +L + K+ + G++ + L D+ +
Sbjct: 4 KQQLACTYAALILADSGKTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDV----- 58
Query: 259 EKLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
LS + GG KE E DDDMGFGLFD
Sbjct: 59 --LSKVSFGGVAPAAGGATAAPAAAAAAAAPAAAAAKKEEEEEDDDMGFGLFD 109
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 33.1 bits (72), Expect = 3.8
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +1
Query: 277 PVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
P G EE K + K +E E +DDMGFGLFD
Sbjct: 44 PAAGAAPAGSPAPSTAAAPAEEKKVETKK--EESEEFEDDMGFGLFD 88
>UniRef50_A5FKG8 Cluster: Peptidase S41; n=1; Flavobacterium
johnsoniae UW101|Rep: Peptidase S41 - Flavobacterium
johnsoniae UW101
Length = 547
Score = 33.1 bits (72), Expect = 3.8
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 121 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
GK + +IL EAD K+ VIT++NGK +++LI R+
Sbjct: 242 GKIIDDKLVITEILGDSLAEADNIKIGTVITKINGKTIKELIEQNRD 288
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 33.1 bits (72), Expect = 3.8
Identities = 29/108 (26%), Positives = 42/108 (38%)
Frame = +1
Query: 94 AAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSS 273
AA +L+ G T+ A ++ + + G+E L K VE L+AA + +
Sbjct: 11 AALMLSDAGLPTS--AENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLMAAAAAQAPT 68
Query: 274 MPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
E+ K D + E DDDMGFGLFD
Sbjct: 69 AASAPSPAAGAASAAAAGGKVEDKKKD-----EPEEEGDDDMGFGLFD 111
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 33.1 bits (72), Expect = 3.8
Identities = 22/67 (32%), Positives = 26/67 (38%)
Frame = +1
Query: 217 LNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDD 396
L GKD+ L++A VG G E K KE E D+D
Sbjct: 61 LKGKDLGSLLSA---------VGSGAAAAPAAASASSAAAPEESAK-KEEKKEEEEEDED 110
Query: 397 MGFGLFD 417
MGF LFD
Sbjct: 111 MGFSLFD 117
>UniRef50_A5DD47 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1750
Score = 33.1 bits (72), Expect = 3.8
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = -3
Query: 290 PPPTGIDDSFSRPA----AISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVL 123
P P GID++ S A A+S S S +S S + S+S P S+SAA+
Sbjct: 329 PTPPGIDETSSSVAASSSAVSSSASSSAASSSAASSSAASSSAPASSSAVSSSAASSSAA 388
Query: 122 PPSTASKYAAT 90
S AS AA+
Sbjct: 389 SSSAASSSAAS 399
>UniRef50_Q5T6F2 Cluster: Ubiquitin-associated protein 2; n=22;
Euteleostomi|Rep: Ubiquitin-associated protein 2 - Homo
sapiens (Human)
Length = 1119
Score = 33.1 bits (72), Expect = 3.8
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 287 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 111
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 110 ASKYAA 93
+ +A+
Sbjct: 723 SHTHAS 728
>UniRef50_A2WTB1 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 76
Score = 32.7 bits (71), Expect = 5.0
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 133 PAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR 258
P V KI+ +V IEAD + K ++ L GKD +A GR
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKDA---VAGGR 54
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 32.7 bits (71), Expect = 5.0
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +1
Query: 337 EEXKXDXKXXX---KEXSESDDDMGFGLFD 417
E+ K D K + ESDDDMGFGLFD
Sbjct: 284 EDKKEDDKAAAAAEESEEESDDDMGFGLFD 313
>UniRef50_Q6VBJ3 Cluster: Epa4p; n=6; Fungi/Metazoa group|Rep: Epa4p
- Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1416
Score = 32.7 bits (71), Expect = 5.0
Identities = 24/96 (25%), Positives = 35/96 (36%)
Frame = -3
Query: 416 SKRPKPMXXXXXXXXXXSXXLSSXFSSXXXXXXXXXXXXXXAPPPTGIDDSFSRPAAISC 237
S P P S SS SS +P P+ S S ++ S
Sbjct: 390 SSSPSPSSSSSSSSSSSSSSSSSS-SSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSS 448
Query: 236 STSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGV 129
S+S SS + S SPS S + S+S++ +
Sbjct: 449 SSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSPSI 484
>UniRef50_Q5AZ50 Cluster: Putative uncharacterized protein; n=2;
Trichocomaceae|Rep: Putative uncharacterized protein -
Emericella nidulans (Aspergillus nidulans)
Length = 1607
Score = 32.7 bits (71), Expect = 5.0
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 370 KEXSESDDDMGFGLFD 417
+E ESDDDMGFGLFD
Sbjct: 1154 EEVEESDDDMGFGLFD 1169
>UniRef50_Q2U9T4 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 197
Score = 32.7 bits (71), Expect = 5.0
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 287 PPTGIDDSFS-RPAAISCSTSLPLSSVITFLSFSPSASIPTE-LRIFSTSAAAGVVLPPS 114
PP G S S RP+ + +LPLSS +T L SPS P++ F T+A A + S
Sbjct: 17 PPPGQTYSLSERPSTLDVP-ALPLSSTLTLLP-SPSMPPPSQTYNNFVTNATADAIFTDS 74
Query: 113 TAS 105
TA+
Sbjct: 75 TAT 77
>UniRef50_A2QA67 Cluster: Contig An01c0330, complete genome; n=1;
Aspergillus niger|Rep: Contig An01c0330, complete genome
- Aspergillus niger
Length = 759
Score = 32.7 bits (71), Expect = 5.0
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -3
Query: 290 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPT-ELRIFSTSAAAGVVLPPS 114
P G++ F+ PAA S STS SSV +++S SA IPT ++R + V PS
Sbjct: 113 PANVGVNSRFAHPAAGSVSTSSSNSSVHSYMSKDDSA-IPTRQIRTDAPLRPLSTVNLPS 171
Query: 113 TAS 105
+S
Sbjct: 172 PSS 174
>UniRef50_Q6Q324 Cluster: Acyl-CoA:cholesterol acyltransferase
alpha; n=2; Toxoplasma gondii|Rep: Acyl-CoA:cholesterol
acyltransferase alpha - Toxoplasma gondii
Length = 650
Score = 32.3 bits (70), Expect = 6.7
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 284 PTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTE--LRIFSTSAAAGVVLPPST 111
P+ S P++ S S+S P SSV F S SPS+S+P+ +S A+G LP S
Sbjct: 57 PSSSSPPSSSPSSSSPSSSSPFSSVC-FSSVSPSSSLPSSSVSSASLSSLASGGKLPGSE 115
Query: 110 ASK 102
S+
Sbjct: 116 TSE 118
>UniRef50_Q5A738 Cluster: Potential Hyr1-like cell wall protein;
n=5; Candida albicans|Rep: Potential Hyr1-like cell wall
protein - Candida albicans (Yeast)
Length = 941
Score = 32.3 bits (70), Expect = 6.7
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -3
Query: 281 TGIDDSFSRPAAISCSTSLPLSSVI-------TFLSFSPSASIPTELRIFSTSAAAGVVL 123
T D S P++IS ST +P SSV + S PS +P+E IFS S+AA
Sbjct: 479 TASDYIVSTPSSISHSTMVPQSSVSALSVVSESLASAEPSFVVPSESFIFSASSAA---- 534
Query: 122 PPSTASKYAAT 90
P ++S Y+ +
Sbjct: 535 PQPSSSTYSVS 545
>UniRef50_Q0U9R7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 4977
Score = 32.3 bits (70), Expect = 6.7
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Frame = -3
Query: 284 PTGIDDS--FSRPAAISCSTSLPLSSVITFLSFS------PSASIPTELRIFSTSAAAGV 129
PTGI S FS P +S T + ++S ++ SFS P S+P+ S G+
Sbjct: 2504 PTGIPQSSLFSLPLGLSQPTEVSVASSVSLQSFSVPSISLPFVSLPSVSLPLEVSGPTGI 2563
Query: 128 VLPPSTA 108
VLP ++
Sbjct: 2564 VLPTGSS 2570
>UniRef50_UPI0001555A46 Cluster: PREDICTED: similar to high
molecular-weight neurofilament, partial; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to high
molecular-weight neurofilament, partial -
Ornithorhynchus anatinus
Length = 310
Score = 31.9 bits (69), Expect = 8.8
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = -3
Query: 266 SFSRPAAISCSTSL-PLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASK 102
S S + S + SL P S++I S SP+++ + ++FS A+G+ PP +A +
Sbjct: 212 SLSPGSTFSPAASLSPASTIIPLTSLSPASTNSSAQQLFSGRPASGLSQPPPSAQR 267
>UniRef50_A3DH59 Cluster: Small GTP-binding protein; n=8;
Bacteria|Rep: Small GTP-binding protein - Clostridium
thermocellum (strain ATCC 27405 / DSM 1237)
Length = 582
Score = 31.9 bits (69), Expect = 8.8
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 121 GKTT---PAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 288
GKTT P D +++ I + +KLK + LN D E+ + G E S + VGG
Sbjct: 122 GKTTVYGPFGKDDKRMNRLWDIILETDKLKSTVVHLNESDEERAVLVGLETSSKVIVGG 180
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 31.9 bits (69), Expect = 8.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 346 KXDXKXXXKEXSESDDDMGFGLFD 417
K + K + E DDDMGFGLFD
Sbjct: 84 KAEEKKKEEPEEEGDDDMGFGLFD 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,576,766
Number of Sequences: 1657284
Number of extensions: 6135625
Number of successful extensions: 20975
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 19951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20843
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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