Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_I24
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 95 3e-20
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 93 8e-20
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 31 0.37
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 31 0.37
AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical ... 31 0.37
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 31 0.37
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.64
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024882-7|AAF60924.1| 285|Caenorhabditis elegans Hypothetical ... 27 6.0
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 27 7.9
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 27 7.9
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 94.7 bits (225), Expect = 3e-20
Identities = 53/112 (47%), Positives = 64/112 (57%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
MRYV+AYLLAVLGG P D++ ILS+VG++AD E K V++ L GK VE+LIA G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
L S+ G + K K KE ESDDDMGFGLFD
Sbjct: 61 GLVSVSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKE--ESDDDMGFGLFD 110
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 93.5 bits (222), Expect = 8e-20
Identities = 51/112 (45%), Positives = 65/112 (58%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 261
M+Y+ AYLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEXKXDXKXXXKEXSESDDDMGFGLFD 417
KLSS+P GG EE K K KE ESDDDMGFGLFD
Sbjct: 61 KLSSVPSGGSAPAAAAPSGGAAPKAEEKK---KEEPKE--ESDDDMGFGLFD 107
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 127 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 246
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 127 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 246
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 352 DXKXXXKEXSESDDDMGFGLFD 417
+ K + ESDDDMGFGLFD
Sbjct: 90 ETKKKEEPKEESDDDMGFGLFD 111
>AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical
protein F54A5.1 protein.
Length = 424
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -3
Query: 290 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 120
P P SRP+AI +TS S + + PS S P+ L +F+ + GV LP
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 352 DXKXXXKEXSESDDDMGFGLFD 417
+ K + ESDDDMGFGLFD
Sbjct: 90 ETKKKEEPKEESDDDMGFGLFD 111
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.64
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 301 ESDDDMGFGLFD 312
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -3
Query: 242 SCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKYAAT*RIF*VLI 66
S +T+ P ++T + P +S PT + ST+ AA V+ T+S + + +F VLI
Sbjct: 2254 SVATAGPTGPILTVV---PVSSAPTSGAVSSTATAAPVITTTKTSSVLSVSFSMFIVLI 2309
>AC024882-7|AAF60924.1| 285|Caenorhabditis elegans Hypothetical
protein Y9C9A.12 protein.
Length = 285
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 12 STFVQRRTLFFRHYTFRVN*DLKNALRGRVFTGCAGWQDHASC 140
ST ++ +H+T R++ D+KN R + FT + SC
Sbjct: 87 STLMKISKPSLKHFTIRISDDIKNKNRDQCFTRILNTLNSKSC 129
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 27.1 bits (57), Expect = 7.9
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -3
Query: 290 PPPT--GIDDSFSRPAA---ISCSTSLPLSSVITFLSFSP---SASIPTELRIFSTSAAA 135
PPPT ++ + RP IS S P S + L+ +P S ++PT+ I +AAA
Sbjct: 300 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 359
Query: 134 GVVLPPSTAS 105
V ST +
Sbjct: 360 AVTSAMSTGN 369
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 27.1 bits (57), Expect = 7.9
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -3
Query: 290 PPPT--GIDDSFSRPAA---ISCSTSLPLSSVITFLSFSP---SASIPTELRIFSTSAAA 135
PPPT ++ + RP IS S P S + L+ +P S ++PT+ I +AAA
Sbjct: 302 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 361
Query: 134 GVVLPPSTAS 105
V ST +
Sbjct: 362 AVTSAMSTGN 371
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 27.1 bits (57), Expect = 7.9
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -3
Query: 290 PPPT--GIDDSFSRPAA---ISCSTSLPLSSVITFLSFSP---SASIPTELRIFSTSAAA 135
PPPT ++ + RP IS S P S + L+ +P S ++PT+ I +AAA
Sbjct: 300 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 359
Query: 134 GVVLPPSTAS 105
V ST +
Sbjct: 360 AVTSAMSTGN 369
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 151 EKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 291
EK +EAD + ++I + + VE L+ A +E+ VGGG
Sbjct: 101 EKTTFQCEMEADNSGVTEMIEKRYTQHVESLLTARKERKRRHRVGGG 147
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -3
Query: 242 SCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKYA 96
S ST P+S+ + + + SIP+ S+ + + PPS+ASK A
Sbjct: 436 SISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASKPA 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,970,879
Number of Sequences: 27780
Number of extensions: 142652
Number of successful extensions: 464
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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