BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_I13
(653 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT014913-1|AAT47764.1| 256|Drosophila melanogaster RH21963p pro... 364 e-101
AY071342-1|AAL48964.1| 256|Drosophila melanogaster RE37829p pro... 364 e-101
AF098520-1|AAF06828.1| 256|Drosophila melanogaster ribosomal pr... 364 e-101
AE014296-477|AAF47660.1| 256|Drosophila melanogaster CG1263-PB,... 364 e-101
AE014296-476|AAF47659.1| 256|Drosophila melanogaster CG1263-PA,... 364 e-101
BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p pro... 290 1e-78
AY113486-1|AAM29491.1| 294|Drosophila melanogaster RE45450p pro... 44 2e-04
AE014296-1910|AAF50091.1| 294|Drosophila melanogaster CG7636-PA... 44 2e-04
AY070942-1|AAL48564.1| 286|Drosophila melanogaster RE03883p pro... 29 7.3
AE013599-1623|AAF58435.2| 286|Drosophila melanogaster CG13321-P... 29 7.3
>BT014913-1|AAT47764.1| 256|Drosophila melanogaster RH21963p
protein.
Length = 256
Score = 364 bits (896), Expect = e-101
Identities = 167/203 (82%), Positives = 183/203 (90%)
Frame = +3
Query: 45 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 224
MGRVIRAQRKGAGSVF +H KKRKGA KLRSL +AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 225 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKXTLEVGNVMPVGAMPEGTIVCNLEEKM 404
VHFRDPY++K RKELFIAPEG++TGQFVYCG+K TL++GNVMP+ MPEGTI+CNLEEK
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 405 GDXGRLARASGNFATVIGHNPDAXRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 584
GD GRLAR SGN+ATVI HN D +T VKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 585 KAGRAYHKYKVKRNCWPYVRGVA 653
KAGRAYHKYKVKRN WP VRGVA
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVA 203
>AY071342-1|AAL48964.1| 256|Drosophila melanogaster RE37829p
protein.
Length = 256
Score = 364 bits (896), Expect = e-101
Identities = 167/203 (82%), Positives = 183/203 (90%)
Frame = +3
Query: 45 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 224
MGRVIRAQRKGAGSVF +H KKRKGA KLRSL +AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 225 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKXTLEVGNVMPVGAMPEGTIVCNLEEKM 404
VHFRDPY++K RKELFIAPEG++TGQFVYCG+K TL++GNVMP+ MPEGTI+CNLEEK
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 405 GDXGRLARASGNFATVIGHNPDAXRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 584
GD GRLAR SGN+ATVI HN D +T VKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 585 KAGRAYHKYKVKRNCWPYVRGVA 653
KAGRAYHKYKVKRN WP VRGVA
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVA 203
>AF098520-1|AAF06828.1| 256|Drosophila melanogaster ribosomal
protein L8 protein.
Length = 256
Score = 364 bits (896), Expect = e-101
Identities = 167/203 (82%), Positives = 183/203 (90%)
Frame = +3
Query: 45 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 224
MGRVIRAQRKGAGSVF +H KKRKGA KLRSL +AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 225 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKXTLEVGNVMPVGAMPEGTIVCNLEEKM 404
VHFRDPY++K RKELFIAPEG++TGQFVYCG+K TL++GNVMP+ MPEGTI+CNLEEK
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 405 GDXGRLARASGNFATVIGHNPDAXRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 584
GD GRLAR SGN+ATVI HN D +T VKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 585 KAGRAYHKYKVKRNCWPYVRGVA 653
KAGRAYHKYKVKRN WP VRGVA
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVA 203
>AE014296-477|AAF47660.1| 256|Drosophila melanogaster CG1263-PB,
isoform B protein.
Length = 256
Score = 364 bits (896), Expect = e-101
Identities = 167/203 (82%), Positives = 183/203 (90%)
Frame = +3
Query: 45 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 224
MGRVIRAQRKGAGSVF +H KKRKGA KLRSL +AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 225 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKXTLEVGNVMPVGAMPEGTIVCNLEEKM 404
VHFRDPY++K RKELFIAPEG++TGQFVYCG+K TL++GNVMP+ MPEGTI+CNLEEK
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 405 GDXGRLARASGNFATVIGHNPDAXRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 584
GD GRLAR SGN+ATVI HN D +T VKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 585 KAGRAYHKYKVKRNCWPYVRGVA 653
KAGRAYHKYKVKRN WP VRGVA
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVA 203
>AE014296-476|AAF47659.1| 256|Drosophila melanogaster CG1263-PA,
isoform A protein.
Length = 256
Score = 364 bits (896), Expect = e-101
Identities = 167/203 (82%), Positives = 183/203 (90%)
Frame = +3
Query: 45 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 224
MGRVIRAQRKGAGSVF +H KKRKGA KLRSL +AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 225 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKXTLEVGNVMPVGAMPEGTIVCNLEEKM 404
VHFRDPY++K RKELFIAPEG++TGQFVYCG+K TL++GNVMP+ MPEGTI+CNLEEK
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 405 GDXGRLARASGNFATVIGHNPDAXRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 584
GD GRLAR SGN+ATVI HN D +T VKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 585 KAGRAYHKYKVKRNCWPYVRGVA 653
KAGRAYHKYKVKRN WP VRGVA
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVA 203
>BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p
protein.
Length = 579
Score = 290 bits (712), Expect = 1e-78
Identities = 130/158 (82%), Positives = 143/158 (90%)
Frame = +3
Query: 180 KDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKXTLEVGNVMPVG 359
KDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG++TGQFVYCG+K TL++GNVMP+
Sbjct: 1 KDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLS 60
Query: 360 AMPEGTIVCNLEEKMGDXGRLARASGNFATVIGHNPDAXRTXVKLPSGAKKVLPSSNRGM 539
MPEGTI+CNLEEK GD GRLAR SGN+ATVI HN D +T VKLPSGAKKV+PS+NR M
Sbjct: 61 QMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAM 120
Query: 540 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 653
VGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVA
Sbjct: 121 VGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVA 158
>AY113486-1|AAM29491.1| 294|Drosophila melanogaster RE45450p
protein.
Length = 294
Score = 44.0 bits (99), Expect = 2e-04
Identities = 33/109 (30%), Positives = 54/109 (49%)
Frame = +3
Query: 174 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKXTLEVGNVMP 353
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 354 VGAMPEGTIVCNLEEKMGDXGRLARASGNFATVIGHNPDAXRTXVKLPS 500
+GA+P GT + LE+ G L A+G F T++ + + V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTILRKFDE--KVVVQLPS 212
>AE014296-1910|AAF50091.1| 294|Drosophila melanogaster CG7636-PA
protein.
Length = 294
Score = 44.0 bits (99), Expect = 2e-04
Identities = 33/109 (30%), Positives = 54/109 (49%)
Frame = +3
Query: 174 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKXTLEVGNVMP 353
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 354 VGAMPEGTIVCNLEEKMGDXGRLARASGNFATVIGHNPDAXRTXVKLPS 500
+GA+P GT + LE+ G L A+G F T++ + + V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTILRKFDE--KVVVQLPS 212
>AY070942-1|AAL48564.1| 286|Drosophila melanogaster RE03883p
protein.
Length = 286
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 516 LPSSNRGMV-GIVAGGGRIDKPILKAGRAYHK 608
+ SS RG+V G V GG D + GRAYH+
Sbjct: 149 IASSGRGIVPGTVVGGHDADGDQIYVGRAYHE 180
>AE013599-1623|AAF58435.2| 286|Drosophila melanogaster CG13321-PA
protein.
Length = 286
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 516 LPSSNRGMV-GIVAGGGRIDKPILKAGRAYHK 608
+ SS RG+V G V GG D + GRAYH+
Sbjct: 149 IASSGRGIVPGTVVGGHDADGDQIYVGRAYHE 180
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,045,219
Number of Sequences: 53049
Number of extensions: 681284
Number of successful extensions: 1695
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -