Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_I10
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 105 4e-23
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 105 4e-23
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 101 4e-22
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 43 2e-04
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 43 2e-04
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 43 2e-04
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 39 0.004
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 36 0.019
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 31 0.71
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 30 1.2
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 29 2.9
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 29 2.9
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 28 5.0
L14745-13|AAR25658.1| 210|Caenorhabditis elegans Hypothetical p... 28 5.0
AL031628-1|CAA20973.1| 416|Caenorhabditis elegans Hypothetical ... 28 5.0
AF024499-7|AAB70358.3| 733|Caenorhabditis elegans Hypothetical ... 28 5.0
AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and cap... 28 5.0
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 28 5.0
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 28 6.7
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 27 8.8
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 27 8.8
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 27 8.8
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 27 8.8
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 27 8.8
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 27 8.8
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 105 bits (251), Expect = 4e-23
Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 30/174 (17%)
Frame = +1
Query: 136 KRNIPIKLGDFSVIDTEFSSIRERFDAE-------MRKMEEEMSKFR------SELMNRE 276
+R I + ++SVID EF ++R+RF+ E M+++ E +R + + N+
Sbjct: 3 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSEFEGYRPNGGPPAAISNQP 62
Query: 277 SNNFFKXXXXXXXXXQ-------------HSDSRQLAE-PSH---WDSLNSPLIQDEGDG 405
N + + H S +A P++ D+L SPLI+DE DG
Sbjct: 63 YNAYSNTSSHHETSNRTGGFGSPLPPPSFHGPSDLMAHRPTYDPYLDNLKSPLIKDESDG 122
Query: 406 KTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNRGVFVAQG 567
KTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN+ + +G
Sbjct: 123 KTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYNQEFLLPRG 176
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 548 EFLLPKGTNPEAIKSSLSRDGVLT 619
EFLLP+GTNPE I S+LS DGVLT
Sbjct: 170 EFLLPRGTNPEQISSTLSTDGVLT 193
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 105 bits (251), Expect = 4e-23
Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 30/174 (17%)
Frame = +1
Query: 136 KRNIPIKLGDFSVIDTEFSSIRERFDAE-------MRKMEEEMSKFR------SELMNRE 276
+R I + ++SVID EF ++R+RF+ E M+++ E +R + + N+
Sbjct: 17 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSEFEGYRPNGGPPAAISNQP 76
Query: 277 SNNFFKXXXXXXXXXQ-------------HSDSRQLAE-PSH---WDSLNSPLIQDEGDG 405
N + + H S +A P++ D+L SPLI+DE DG
Sbjct: 77 YNAYSNTSSHHETSNRTGGFGSPLPPPSFHGPSDLMAHRPTYDPYLDNLKSPLIKDESDG 136
Query: 406 KTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNRGVFVAQG 567
KTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN+ + +G
Sbjct: 137 KTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYNQEFLLPRG 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 548 EFLLPKGTNPEAIKSSLSRDGVLT 619
EFLLP+GTNPE I S+LS DGVLT
Sbjct: 184 EFLLPRGTNPEQISSTLSTDGVLT 207
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 101 bits (242), Expect = 4e-22
Identities = 43/68 (63%), Positives = 57/68 (83%)
Frame = +1
Query: 364 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 543
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN
Sbjct: 12 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 71
Query: 544 RGVFVAQG 567
+ + +G
Sbjct: 72 QEFLLPRG 79
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 548 EFLLPKGTNPEAIKSSLSRDGVLT 619
EFLLP+GTNPE I S+LS DGVLT
Sbjct: 73 EFLLPRGTNPEQISSTLSTDGVLT 96
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 427 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 516
DVSQ+ PEE+ V VDN+L++ KH EK+D
Sbjct: 62 DVSQFEPEELKVNIVDNQLIIEGKHNEKTD 91
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 548 EFLLPKGTNPEAIKSSLSRDGVLT 619
++ LP G PE IKS LS +GVLT
Sbjct: 103 KYNLPTGVRPEQIKSELSNNGVLT 126
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 427 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 516
DVSQ+ PEE+ V VDN+L++ KH EK+D
Sbjct: 61 DVSQFEPEELKVNIVDNQLIIEGKHNEKTD 90
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 548 EFLLPKGTNPEAIKSSLSRDGVLT 619
++ LP G PE IKS LS +GVLT
Sbjct: 102 KYNLPTGVRPEQIKSELSNNGVLT 125
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 355 SHWD---SLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTK- 522
S WD N +++ + ++ DV +TP+EI VK +LL+H +HE +SD
Sbjct: 12 STWDWPLQHNDGVVKVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHG 71
Query: 523 SVYREYNR 546
+V RE NR
Sbjct: 72 TVAREINR 79
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 370 LNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREY 540
+NS ++ D+ + + D Q+ PEEI VKT+D+ L++ +HE+ D + + Y
Sbjct: 103 VNSNVVNDD---RRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMY 156
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 343 LAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDT 519
++ PS S N L + DVS+Y + + V VDN ++V H EK DT
Sbjct: 58 ISSPSVVGSQNGNLTSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDT 116
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 551 FLLPKGTNPEAIKSSLSRDGVLT 619
F LPK PE+++S L+ DG LT
Sbjct: 128 FPLPKAVAPESVQSQLTADGHLT 150
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 530 TENTTGEFLLPKGTNPEAIKSSLSRDGVL 616
T + T + LPKGT+P IKS L G+L
Sbjct: 73 TRSITRCYRLPKGTDPATIKSKLDGSGIL 101
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/67 (20%), Positives = 33/67 (49%)
Frame = +1
Query: 364 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 543
D++ ++ DE ++ DVS + PE + +K +L + E KS+ + R ++
Sbjct: 42 DNIGEQIVNDESK---FSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFS 98
Query: 544 RGVFVAQ 564
+ + + +
Sbjct: 99 KMILLPE 105
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = -1
Query: 645 RVVAMALPPVSTPSRDSEDLMASGFVPLGNKNSPVVFSVHRFRIRF 508
R V++A+ ++T + +EDL + GF LG + +V V+R ++
Sbjct: 2952 RKVSLAVFDLATETLSAEDLQSKGFTELGMDSLSIVDFVNRLNDKY 2997
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/67 (19%), Positives = 34/67 (50%)
Frame = +1
Query: 364 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 543
D++ ++ DE ++ DVS + PE++ ++ +L + E+KS+ R ++
Sbjct: 42 DNIGEQIVNDESK---FSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFS 98
Query: 544 RGVFVAQ 564
+ + + +
Sbjct: 99 KMILLPE 105
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/55 (21%), Positives = 27/55 (49%)
Frame = +1
Query: 400 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNRGVFVAQ 564
D ++ DVS + PE + +K +L + E KS+ + R +++ + + +
Sbjct: 4 DESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFSKMILLPE 58
>L14745-13|AAR25658.1| 210|Caenorhabditis elegans Hypothetical
protein C02F5.13 protein.
Length = 210
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -2
Query: 551 TPLLYSLYTDFVSDFSSCLAWTSNLLSTVLTTISSGVYWL 432
T LLYS++ V+ CL +++ + ++T G++W+
Sbjct: 148 TTLLYSIFLGVVAVDRFCLGYSAMAVGKLMTLGGFGIWWI 187
>AL031628-1|CAA20973.1| 416|Caenorhabditis elegans Hypothetical
protein Y102A5D.1 protein.
Length = 416
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 452 RSLLRLSTTNYWSTPNTRRNLIRNLCTENTTGEFLLPKGTNPEAIKSSLSRD 607
R+LL L NY S TRR R+ ++ TG LP T + ++ L R+
Sbjct: 277 RALLNLLACNYNSFDQTRRKEYRSRWKKSNTGGCHLPLRTWNRSDETKLKRE 328
>AF024499-7|AAB70358.3| 733|Caenorhabditis elegans Hypothetical
protein F42G2.6 protein.
Length = 733
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +3
Query: 93 FHAANNVKNG*QWSQEKYPHQAWRFFGYRYRILKHQRALRCRN-EEDGRRNEQIQIRTHE 269
+ A+ + WS Y A F YR K+ + C+ E +E++ +
Sbjct: 218 YEVADRTDDEKNWSSFSY--DAIHFLEQEYRKTKYISSTDCQKISEKIHLDEELIEKWFR 275
Query: 270 QRKQQFLQEHN*HDDIFTA**QQTACRAK 356
R+ +E N ++DIFT+ QQT K
Sbjct: 276 ARRATSKREANSNEDIFTSQYQQTKLTMK 304
>AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 4 protein.
Length = 756
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 202 ERFDAEMRKMEEEMSKFRSELMNRE 276
E F+ + +KM EE KFR EL +
Sbjct: 701 EEFECQRKKMHEERRKFREELRTNQ 725
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/55 (21%), Positives = 27/55 (49%)
Frame = +1
Query: 400 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNRGVFVAQ 564
D ++ DVS + PE + +K +L + E KS+ + R +++ + + +
Sbjct: 50 DESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFSKMILLPE 104
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 394 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 546
E + ++ DV+ + PEE+ V + L + HE K++ R + R
Sbjct: 47 ENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKTEHGFSKRSFTR 97
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 413 SSFALMSASILPKRSLLRLSTTNYWSTPNTRRNLIRNLCTENTTGEFLLPKGT-NPEAIK 589
S+ +L S+S +P S +T+ STP + + TTGE T P I
Sbjct: 1248 SATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEMTSHGSTQTPSTIG 1307
Query: 590 SSLSRDGVLTGGSAIATT 643
S++++ ++G ++ +T
Sbjct: 1308 STVTQPSTVSGSNSSGST 1325
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 418 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEE-KSDTKSVYREYNRGVFVAQ 564
+ +V PEE+ + KL + A+H+E ++D S + Y++ + + +
Sbjct: 53 VNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLPE 102
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 192 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 299
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 194 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 230
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 192 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 299
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 145 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 181
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 192 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 299
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 231 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 267
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +2
Query: 398 VTARLSSFALMSASILPKRSLLRLSTTNYWSTPNTRRNLIRNLCTENTTGEFLLPKGTNP 577
+T +SS A M ++ L + + S+ +T ++ ++TT +L
Sbjct: 436 ITPEMSSTASMEITLSTTSDLTSTYPSTFTSSWSTESTVLTTQ-QQDTTTSVILETTEAT 494
Query: 578 EAIKSSLSRDGVLTGGSAIATT 643
+A SSLS D V T + ATT
Sbjct: 495 DAASSSLSPDDVSTQLTTEATT 516
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 192 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 299
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 258 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,155,760
Number of Sequences: 27780
Number of extensions: 289574
Number of successful extensions: 1087
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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