Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_I10
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.5  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   3.4  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   3.4  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   3.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.0  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   7.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +1

Query: 403 GKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD----TKSVYREYNRGVFVAQGN 570
           G+TL+L+  V+ Y  EEI  +  + +L    + +   D      SV ++ + GV+     
Sbjct: 533 GETLRLKCPVAGYPIEEIKWERANRELPDDLRQKVLPDGTLVITSVQKKGDAGVYTCSAR 592

Query: 571 KS*GH 585
              GH
Sbjct: 593 NKQGH 597


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +1

Query: 403 GKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD----TKSVYREYNRGVFVAQGN 570
           G+TL+L+  V+ Y  EEI  +  + +L    + +   D      SV ++ + GV+     
Sbjct: 533 GETLRLKCPVAGYPIEEIKWERANRELPDDLRQKVLPDGTLVITSVQKKGDAGVYTCSAR 592

Query: 571 KS*GH 585
              GH
Sbjct: 593 NKQGH 597


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +1

Query: 175 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 354
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 355 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 480
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +1

Query: 175 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 354
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 355 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 480
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +1

Query: 175 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 354
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 355 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 480
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVAINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 480 FVVDSLNNDLF 448
           F+VD L NDLF
Sbjct: 96  FIVDRLRNDLF 106


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 140 LLRPLSAIFHVICRVEIVETKQTLKRSRVNTF 45
           L  PL+ I H  C   I  T+   + +R N F
Sbjct: 287 LEEPLTTIQHNNCLTRIPSTRINKQHTRGNNF 318


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,578
Number of Sequences: 438
Number of extensions: 3431
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)