Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_I04
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061414-1|AAL28962.1|  171|Drosophila melanogaster LD34461p pro...   140   2e-33
AE014296-3266|AAF49080.2|  171|Drosophila melanogaster CG7654-PA...   140   2e-33
AE014297-1180|AAF54543.1|  147|Drosophila melanogaster CG14690-P...    90   2e-18
BT022641-1|AAY55057.1|   88|Drosophila melanogaster IP07008p pro...    44   1e-04
BT022614-1|AAY55030.1|   88|Drosophila melanogaster IP06908p pro...    44   1e-04
L09700-1|AAA28569.1|  399|Drosophila melanogaster GTP-binding pr...    29   4.2  
AE014296-2779|AAF49429.2|  399|Drosophila melanogaster CG12232-P...    29   4.2  

>AY061414-1|AAL28962.1|  171|Drosophila melanogaster LD34461p
           protein.
          Length = 171

 Score =  140 bits (338), Expect = 2e-33
 Identities = 64/137 (46%), Positives = 92/137 (67%)
 Frame = +3

Query: 117 MMEITRTTLGIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGG 296
           M+E+ +T +GIA G+AGTLF+GYC+YFD++RR DP +KKK+RERR    +   ++ T   
Sbjct: 1   MIEMNKTAIGIAAGVAGTLFIGYCIYFDKKRRSDPEYKKKVRERR----RRNKKTGTAKS 56

Query: 297 PVPDMNDHEAMQRFFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQQTMP 476
            VP++NDHEA++R+FLQ+IQ              VEHL  A+ VCGQ  +LL VLQ ++P
Sbjct: 57  GVPNLNDHEAIERYFLQEIQLGETLIARGDFESGVEHLANAIVVCGQPARLLQVLQSSLP 116

Query: 477 APIFHLLLKKLPEVSER 527
           A +F +L+ K+ E   R
Sbjct: 117 AQVFAMLIVKMQEFGNR 133


>AE014296-3266|AAF49080.2|  171|Drosophila melanogaster CG7654-PA
           protein.
          Length = 171

 Score =  140 bits (338), Expect = 2e-33
 Identities = 64/137 (46%), Positives = 92/137 (67%)
 Frame = +3

Query: 117 MMEITRTTLGIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGG 296
           M+E+ +T +GIA G+AGTLF+GYC+YFD++RR DP +KKK+RERR    +   ++ T   
Sbjct: 1   MIEMNKTAIGIAAGVAGTLFIGYCIYFDKKRRSDPEYKKKVRERR----RRNKKTGTAKS 56

Query: 297 PVPDMNDHEAMQRFFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQQTMP 476
            VP++NDHEA++R+FLQ+IQ              VEHL  A+ VCGQ  +LL VLQ ++P
Sbjct: 57  GVPNLNDHEAIERYFLQEIQLGETLIARGDFESGVEHLANAIVVCGQPARLLQVLQSSLP 116

Query: 477 APIFHLLLKKLPEVSER 527
           A +F +L+ K+ E   R
Sbjct: 117 AQVFAMLIVKMQEFGNR 133


>AE014297-1180|AAF54543.1|  147|Drosophila melanogaster CG14690-PA
           protein.
          Length = 147

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
 Frame = +3

Query: 138 TLGIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGGPVPDMND 317
           T  +   I+G LF+GYCVYFD+QRR DP FK+KL ERR+  Q++ +  ++         D
Sbjct: 7   TFKVLAAISGILFMGYCVYFDKQRRSDPDFKRKLHERRI--QRSLASVKSTASVSMSERD 64

Query: 318 HEAMQRFFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQQTMPAPIFHLL 497
            E    +F+ QI               VEHL  A+ VCGQ  +LL +LQ T+P  IF  +
Sbjct: 65  VEV---YFMTQIHKGETLITNGDVEAGVEHLINAILVCGQPSKLLQLLQSTLPMDIFTTM 121

Query: 498 LKKLP--EVSER 527
           L K+   E S+R
Sbjct: 122 LIKMHAYEASQR 133


>BT022641-1|AAY55057.1|   88|Drosophila melanogaster IP07008p
           protein.
          Length = 88

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 336 FFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQQTMPAPIFHLLLKKLP- 512
           +F+ QI               VEHL  A+ VCGQ  +LL +LQ T+P  IF  +L K+  
Sbjct: 9   YFMTQIHKGETLITNGDVEAGVEHLINAILVCGQPSKLLQLLQSTLPMDIFTTMLIKMHA 68

Query: 513 -EVSER 527
            E S+R
Sbjct: 69  YEASQR 74


>BT022614-1|AAY55030.1|   88|Drosophila melanogaster IP06908p
           protein.
          Length = 88

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 336 FFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQQTMPAPIFHLLLKKLP- 512
           +F+ QI               VEHL  A+ VCGQ  +LL +LQ T+P  IF  +L K+  
Sbjct: 9   YFMTQIHKGETLITNGDVEAGVEHLINAILVCGQPSKLLQLLQSTLPMDIFTTMLIKMHA 68

Query: 513 -EVSER 527
            E S+R
Sbjct: 69  YEASQR 74


>L09700-1|AAA28569.1|  399|Drosophila melanogaster GTP-binding
           protein alpha-subunit protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 156 GIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGGPVPDMNDHEAMQR 335
           GI   LFL  C  FDQ  R+DP   +     +L      +R     G +  +N ++ M+R
Sbjct: 238 GIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMER 297


>AE014296-2779|AAF49429.2|  399|Drosophila melanogaster CG12232-PA
           protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 156 GIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGGPVPDMNDHEAMQR 335
           GI   LFL  C  FDQ  R+DP   +     +L      +R     G +  +N ++ M+R
Sbjct: 238 GIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMER 297


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,808,648
Number of Sequences: 53049
Number of extensions: 545132
Number of successful extensions: 1531
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)