Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_I03
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 194 3e-50
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 100 7e-22
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 92 3e-19
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 90 1e-18
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 2.0
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 29 2.7
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 29 2.7
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 29 2.7
Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical pr... 29 3.5
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 4.6
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 4.6
Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 194 bits (474), Expect = 3e-50
Identities = 95/165 (57%), Positives = 115/165 (69%)
Frame = +3
Query: 123 KGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISSSQ 302
K +FIVGAKRT FGTFGG + SAT+L +A+ ALK A V VD ++ G V++SS+
Sbjct: 4 KCVFIVGAKRTAFGTFGGKLKGLSATDLGVVASQAALKHANVGADAVDHVIFGNVVASSR 63
Query: 303 TDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMS 482
DGIY RH LK+G+PQ L +NRLCGSGFQ++VN+AQ I G + I +AGG ENMS
Sbjct: 64 -DGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQAVVNAAQAIKLGESNIVLAGGTENMS 122
Query: 483 QAPFAVRNVRFGTALGTNYAFEDTLWAGLSDSYCGLPMGMTAXKL 617
PFAVR++RFGTALG Y FED LW LSD Y L MG TA KL
Sbjct: 123 MVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAKLAMGQTAEKL 167
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 100 bits (240), Expect = 7e-22
Identities = 60/170 (35%), Positives = 90/170 (52%)
Frame = +3
Query: 105 SCLLQLKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQ 284
S L K FIVGA RTP G+F + +A EL ++A AL+ V P+ + + +GQ
Sbjct: 16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Query: 285 VISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAG 464
V ++ G R AAL AG+ V +N++C SG ++I+ +AQ I TG ++ G
Sbjct: 76 VCQANA--GQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGG 133
Query: 465 GVENMSQAPFAVRNVRFGTALGTNYAFEDTLWAGLSDSYCGLPMGMTAXK 614
G+E+MSQ PF V+ R G + + GL+D+Y + MG K
Sbjct: 134 GMESMSQVPFYVQ--RGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEK 181
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 91.9 bits (218), Expect = 3e-19
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Frame = +3
Query: 105 SCLLQLKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVD--SMVV 278
S L K FIVGA RTP G+F + +A EL ++A AL+ V P+ + ++ +
Sbjct: 94 SAALSNKDAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEANVFL 153
Query: 279 GQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISV 458
GQV ++ G + R AAL AG+ V +N+ SG ++I+ +AQ I TG +++
Sbjct: 154 GQVCHANA--GQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAI 211
Query: 459 AGGVENMSQAPFAVRNVRFGTALGTNYAFEDTLWAGLSDSY 581
GG+E+MSQ PF + V + Y E T+ G+SD +
Sbjct: 212 GGGMESMSQVPFFLARVEQSS---NKYQVEQTVQDGISDFF 249
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 89.8 bits (213), Expect = 1e-18
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Frame = +3
Query: 123 KGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISSSQ 302
K +FI+ RTP G + G F N A EL T+A A++ +GV+P +++ ++ G V+ +
Sbjct: 4 KKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLPAGL 63
Query: 303 TDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMS 482
G R +L AG+P + +N++C S +++V +A +I G + G ENMS
Sbjct: 64 --GQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENMS 121
Query: 483 QAPFAV--RNVRFGTALGTNYAFEDTLWAGLSDSYCGLPMGMTAXK 614
Q PF V + FG T+ +D GL D PMG+ A K
Sbjct: 122 QVPFYVPRGEIPFGGIQMTDGISKD----GLEDIKEKGPMGLCAEK 163
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 70.1 bits (164), Expect = 1e-12
Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Frame = +3
Query: 120 LKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISSS 299
+ I +V A RTPF G VF++ A +LQ A +++ + Q+D ++ G VI
Sbjct: 23 MPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVIQEC 82
Query: 300 QTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENM 479
+T I R AAL AG+P + P + C S ++ + TG A +AGGVE +
Sbjct: 83 KTSNI--AREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELL 140
Query: 480 SQAPFAV-RNVRFGTALGTNYA 542
S P RN R LG N A
Sbjct: 141 SDVPIRYNRNAR-KAMLGMNKA 161
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 446 QDLSSGGSREHVASALRGQKREVRHGSGHQLRLRRHPLGRT 568
QD S++ SA G++ E GSGH +R HP T
Sbjct: 622 QDCHEMWSKKQKKSARLGRQAEGSSGSGHSIRATSHPRAPT 662
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 472 RTCRKRPSRSET*GSARLWAPTTPSKTPSGPDSRTHT 582
+T + S+S T G P TPSKTPS +R+ +
Sbjct: 55 KTPSRSASKSATRGRTASKTPKTPSKTPSSASARSRS 91
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = +3
Query: 207 QTIATVGALKEAGVSPAQVDSMVVGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRL 386
Q IAT+ +K AG+ P+ + V G +S D + +AGI V+
Sbjct: 465 QPIATI--VKNAGLEPSSIIDEVTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQ 522
Query: 387 CGSGFQSIVNSAQDILTGAAKISVAGG 467
SG S++ + + ++T K GG
Sbjct: 523 DASGVASLLATTECVVTEIPKEEAVGG 549
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = +3
Query: 207 QTIATVGALKEAGVSPAQVDSMVVGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRL 386
Q IAT+ +K AG+ P+ + V G +S D + +AGI V+
Sbjct: 465 QPIATI--VKNAGLEPSSIIDEVTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQ 522
Query: 387 CGSGFQSIVNSAQDILTGAAKISVAGG 467
SG S++ + + ++T K GG
Sbjct: 523 DASGVASLLATTECVVTEIPKEEAVGG 549
>Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical
protein R08H2.1 protein.
Length = 277
Score = 28.7 bits (61), Expect = 3.5
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Frame = +3
Query: 207 QTIATVGALKEAGVSPAQVDSMVVGQV-ISSSQTDGIYTPRHAALKAGIPQEKPVLGINR 383
++I G+ G S A + + QV I+ D + R LKAG+P EK +
Sbjct: 7 KSIIITGSSSGIGRSAAVIFAKEGAQVTITGRSADRLEETRLQILKAGVPAEKINAVVAD 66
Query: 384 LC-GSGFQSIVNSAQ------DILTGAAKISVAGGVENMSQA 488
+C SG ++ + DIL A + G N QA
Sbjct: 67 VCEASGQDEVIRTTLAKFGKIDILVNNAGALLTDGTSNTDQA 108
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 490 PSRSET*GSARLWAPTTPSKTPSGPDSRTHTADSP 594
PS SE G++ ++PT+P+ +PS P T++ SP
Sbjct: 1808 PSPSEQPGTSAQYSPTSPTYSPSSP---TYSPASP 1839
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 490 PSRSET*GSARLWAPTTPSKTPSGPDSRTHTADSP 594
PS SE G++ ++PT+P+ +PS P T++ SP
Sbjct: 1815 PSPSEQPGTSAQYSPTSPTYSPSSP---TYSPASP 1846
>Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical
protein F25D1.5 protein.
Length = 277
Score = 27.5 bits (58), Expect = 8.1
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Frame = +3
Query: 207 QTIATVGALKEAGVSPAQVDSMVVGQV-ISSSQTDGIYTPRHAALKAGIPQEKPVLGINR 383
+++ G+ G S A + + QV I+ D + + LKAG+P EK +
Sbjct: 7 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD 66
Query: 384 LC-GSGFQSIVNSAQ------DILTGAAKISVAGGVENMSQ 485
+ SG I+N+ DIL A ++A G N Q
Sbjct: 67 VTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQ 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,982,317
Number of Sequences: 27780
Number of extensions: 296379
Number of successful extensions: 940
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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