Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H23
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   8.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 626 FFFGISTFYYF 594
           F+F ISTF+YF
Sbjct: 239 FYFFISTFFYF 249


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 626 FFFGISTFYYF 594
           F+F ISTF+YF
Sbjct: 235 FYFFISTFFYF 245


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 274 HSTSCPENSGTITIS 318
           ++T+CPE   T+T++
Sbjct: 123 NTTNCPEQKNTVTVT 137


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 272 PAPIMGRKFGASDWPQALKN 213
           P+PI+  +FG ++   A  N
Sbjct: 135 PSPILSNRFGENEEADAASN 154


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 28  YDSFFYKHACLCYAYLICVIVQTWKTVEMFLTYDAITTF 144
           Y +FF  H       +  + VQT K+V  FL    +  F
Sbjct: 117 YYAFFGVHLAYGVVIIYSICVQTEKSVFDFLCRHTVEYF 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,443
Number of Sequences: 336
Number of extensions: 3112
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)