Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_H22
(652 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.5
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 3.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 3.4
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 4.5
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 4.5
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 4.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 5.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 5.9
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 5.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.8
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 7.8
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.8 bits (49), Expect = 1.5
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 524 YKSHIYSYNSTRNTLYFNTIYSNY*NHQK--YYSTWNFXQ 637
+ ++ Y YN N N +NY N+ K YY+ N Q
Sbjct: 324 HNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIINIEQ 363
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = -1
Query: 340 NVLNSLCNFFEMKFHIIKCRFGINQNLYGINNNPKIVLIQFIGKF 206
NV +C+ + ++F + ++GI QN +I ++ G F
Sbjct: 48 NVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMF 92
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 554 TRNTLYFNTIYSNY*NHQKYYS 619
+ T++ N Y+NY N + YY+
Sbjct: 308 SNKTIHNNNNYNNYNNKKLYYN 329
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 629 SSRSNNISDGFNNYYKWY*N 570
SS SNN + NNY K Y N
Sbjct: 83 SSLSNNYNYNNNNYKKLYCN 102
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 629 SSRSNNISDGFNNYYKWY*N 570
SS SNN + NNY K Y N
Sbjct: 83 SSLSNNYNYNNNNYKKLYCN 102
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 629 SSRSNNISDGFNNYYKWY*N 570
SS SNN + NNY K Y N
Sbjct: 83 SSLSNNYNYNNNNYKKLYCN 102
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 5.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 515 N*KYKSHIYSYNSTRNTLYFNTIYSNY*NHQKYY 616
N KY S+ +YN+ N Y N +NY K Y
Sbjct: 88 NYKY-SNYNNYNNNYNNNYNNNYNNNYKKLYKNY 120
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 5.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 515 N*KYKSHIYSYNSTRNTLYFNTIYSNY*NHQKYY 616
N KY S+ +YN+ N Y N +NY K Y
Sbjct: 88 NYKY-SNYNNYNNNYNNNYNNNYNNNYKKLYKNY 120
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 560 NTLYFNTIYSNY*NHQKYYSTWNFXQ 637
++L NTI++N N + YY+ N Q
Sbjct: 316 SSLSNNTIHNNNYNKKLYYNIINIEQ 341
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 643 IVLXKVPGRIIFLMVSIIT 587
++ KV R+ LM+S+IT
Sbjct: 631 VLAKKVADRVSMLMISVIT 649
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 542 SYNSTRNTLYFNTIYSNY 595
S+ T N YF+ Y NY
Sbjct: 209 SWRITHNFFYFDPRYGNY 226
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,089
Number of Sequences: 438
Number of extensions: 2305
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -