Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_H21
(384 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 79 2e-14
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 71 6e-12
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 70 2e-11
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 59 2e-08
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 55 4e-07
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 52 4e-06
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 49 3e-05
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 46 3e-04
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 42 0.005
UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8; Fungi/M... 41 0.007
UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 38 0.049
UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative; ... 35 0.46
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 34 0.81
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 33 1.9
UniRef50_A5B705 Cluster: Putative uncharacterized protein; n=1; ... 33 2.5
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 33 2.5
UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2; ... 31 5.7
UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Re... 31 7.5
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 79.4 bits (187), Expect = 2e-14
Identities = 43/71 (60%), Positives = 48/71 (67%)
Frame = +2
Query: 62 MPREIKDIKDFLINGEEERRQIGQNKEEPXXXXXXXXXXXXFLYTLVITDKEKAEKLKQS 241
MPREIKDIKDFL+ + + + K+ FLYTLVITDKEKAEKLKQS
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNQQNVKFKVRCSR-FLYTLVITDKEKAEKLKQS 59
Query: 242 LPPGLQVKEVK 274
LPPGLQVKEVK
Sbjct: 60 LPPGLQVKEVK 70
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 71.3 bits (167), Expect = 6e-12
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = +2
Query: 62 MPREIKDIKDFLINGEEERRQIGQNKEEPXXXXXXXXXXXXFLYTLVITDKEKAEKLKQS 241
MP+EIK+IKDFL+ + + + K+ +LYTLV+ DK+KAEKLKQS
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKN-SNNTKFKVRCASYLYTLVVADKDKAEKLKQS 59
Query: 242 LPPGLQVKEVK 274
LPPG+QVKE+K
Sbjct: 60 LPPGIQVKELK 70
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 69.7 bits (163), Expect = 2e-11
Identities = 37/71 (52%), Positives = 47/71 (66%)
Frame = +2
Query: 62 MPREIKDIKDFLINGEEERRQIGQNKEEPXXXXXXXXXXXXFLYTLVITDKEKAEKLKQS 241
MPR+I++IKDFL+ + + + K+ +LYTLVITDKEKAEKLKQS
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSR-YLYTLVITDKEKAEKLKQS 59
Query: 242 LPPGLQVKEVK 274
LPPGL VKE+K
Sbjct: 60 LPPGLAVKELK 70
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 185 FLYTLVITDKEKAEKLKQSLPPGLQVKEVK 274
+LYTLVITDKEKAEKLKQSLPPGL VKE+K
Sbjct: 390 YLYTLVITDKEKAEKLKQSLPPGLSVKELK 419
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 55.2 bits (127), Expect = 4e-07
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = +2
Query: 62 MPREIKDIKDFLINGEEERRQIGQNKEEPXXXXXXXXXXXXFLYTLVITDKEKAEKLKQS 241
MP++I +IKDFL+ + + + K +LYTL + D+EKA+KLKQS
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSR-YLYTLCVFDQEKADKLKQS 59
Query: 242 LPPGLQVKEV 271
LPPGL V+++
Sbjct: 60 LPPGLSVQDL 69
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 52.0 bits (119), Expect = 4e-06
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 62 MPREIKDIKDFL-INGEEERRQIGQNKEEPXXXXXXXXXXXXFLYTLVITDKEKAEKLKQ 238
MP E+ DIK F+ I ++ + FLYTLV+ D +KA+KLKQ
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQ 60
Query: 239 SLPPGLQVKEV 271
SLPP L++ +V
Sbjct: 61 SLPPSLKIADV 71
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 49.2 bits (112), Expect = 3e-05
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +2
Query: 62 MPREIKDIKDFLINGEEERRQIGQNKEEPXXXXXXXXXXXXFLYTLVITDKEKAEKLKQS 241
+PREI++IKDFL+ + + + + K+ LYTLVITDKEKAEKLKQ
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRH-LYTLVITDKEKAEKLKQ- 74
Query: 242 LPPGLQVKEV 271
L +Q++ +
Sbjct: 75 LKKAVQIQRL 84
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 45.6 bits (103), Expect = 3e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +2
Query: 62 MPREIKDIKDFLINGEEERRQIGQNKEEPXXXXXXXXXXXXFLYTLVITDKEKAEKLKQS 241
MPREIK +K+FL + + + K P +LYTLV+ DK+KA+K+++S
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNPSATKFKVRCSR-YLYTLVVNDKKKADKIERS 59
Query: 242 LPPGLQ 259
+ P ++
Sbjct: 60 IHPSVK 65
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 41.5 bits (93), Expect = 0.005
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Frame = +2
Query: 62 MPREIKDIKDFLI---NGEEERRQIGQNKE-----EPXXXXXXXXXXXXFLYTLVITDKE 217
M REIKDIK+F+ + + + NK + + YTLV+ D
Sbjct: 1 MAREIKDIKEFVELARRSDIKSAVVKVNKALNANGKKIKQTKFKVRGSRYQYTLVVNDAA 60
Query: 218 KAEKLKQSLPPGLQVKEV 271
KA+KL+QSLPP L++K +
Sbjct: 61 KAKKLQQSLPPTLEIKNL 78
>UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8;
Fungi/Metazoa group|Rep: 60S ribosomal protein L38 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 78
Score = 41.1 bits (92), Expect = 0.007
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +2
Query: 62 MPREIKDIKDFLI---NGEEERRQIGQNKE-----EPXXXXXXXXXXXXFLYTLVITDKE 217
M REI DIK FL + + + NK+ +P LYTLVI D
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQTKFKVRGSSSLYTLVINDAG 60
Query: 218 KAEKLKQSLPPGLQVKEV 271
KA+KL QSLPP L+V +
Sbjct: 61 KAKKLIQSLPPTLKVNRL 78
>UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 78
Score = 38.3 bits (85), Expect = 0.049
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +2
Query: 62 MPREIKDIKDFL-------INGEEERRQIGQNKE-EPXXXXXXXXXXXXFLYTLVITDKE 217
M +EI DIK+FL +N + NK + +LYTL++ D
Sbjct: 1 MAKEIADIKEFLELIRRQDVNSATVKINKKLNKNGKAFRQTKFKLRGSRYLYTLIVNDAG 60
Query: 218 KAEKLKQSLPPGLQVKEV 271
KA+KL QSLPP V ++
Sbjct: 61 KAKKLLQSLPPTFNVNKL 78
>UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative;
n=4; Plasmodium|Rep: 60S ribosomal protein L38-1,
putative - Plasmodium vivax
Length = 93
Score = 35.1 bits (77), Expect = 0.46
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +2
Query: 62 MPREIKDIKDFL-INGEEERRQIGQNKEEPXXXXXXXXX-----XXXFLYTLVITDKEKA 223
MP++I DI+ FL I+ + + + K++ +LYT+V DK+KA
Sbjct: 1 MPKQITDIRKFLKISRKPDTTAVIIMKKKSKTKKNTIITKLKLRTKKYLYTMVFADKKKA 60
Query: 224 EKLKQSLPPGLQ 259
E+++ SL P L+
Sbjct: 61 ERIENSLLPSLK 72
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 34.3 bits (75), Expect = 0.81
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 185 FLYTLVITDKEKAEKLKQSLPPGLQVKEV 271
+LYT + DK KAE+LK+++P + V E+
Sbjct: 41 YLYTYICADKAKAEELKKAIPKDIHVVEI 69
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 33.1 bits (72), Expect = 1.9
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +2
Query: 62 MPREIKDIKDFL--INGEEERRQIGQNKEEPXXXXXXXXXX--XXFLYTLVITDKEKAEK 229
MP+E+KD+KD+L + + + + K+ +LYT + ++ KA K
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLLSTKFKVRCSRYLYTFSVPNQVKAAK 60
Query: 230 LKQSLPPGLQVKEV 271
++ ++P L+ K +
Sbjct: 61 VEATIPSNLEKKVI 74
>UniRef50_A5B705 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 434
Score = 32.7 bits (71), Expect = 2.5
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 56 FNMPREIKDIKDFLINGE-EERRQIGQNKEEPXXXXXXXXXXXXFLYTLVIT--DKEKAE 226
FN P DIK+ +NG+ EE+ Q ++ +V+T DKE+ E
Sbjct: 177 FNWPLHQLDIKNAFLNGDLEEKSQANHTIFYKHSKDGKIAILIVYVDDIVLTGSDKEELE 236
Query: 227 KLKQSLPPGLQVKEV 271
+LK+ L ++K++
Sbjct: 237 RLKRRLATEFEIKDL 251
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 32.7 bits (71), Expect = 2.5
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +2
Query: 188 LYTLVITDKEKAEKLKQSLPPGLQVKEV 271
LYTL + D+ KA+K+ QSLP +++ ++
Sbjct: 55 LYTLTVDDRTKADKIVQSLPSSIKIIKI 82
>UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 162
Score = 31.5 bits (68), Expect = 5.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 126 SVKIKKNPAECQVQGFDAQGSCTPWSSLTKRRLRNLSR 239
S+++ + P DA +CTP S+T RRLR+ SR
Sbjct: 102 SLRLPRPPPTSPSSRSDAPSTCTPLFSMTLRRLRSSSR 139
>UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Rep:
Ribosomal protein - Oryza sativa (Rice)
Length = 79
Score = 31.1 bits (67), Expect = 7.5
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +2
Query: 62 MPREIKDIKDFLINGEEERRQIGQNKEE 145
MP++I +IK +GEEE R++G ++E+
Sbjct: 1 MPKQIHEIKGLPPDGEEEGREVGADQED 28
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,702,459
Number of Sequences: 1657284
Number of extensions: 4032340
Number of successful extensions: 9302
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9286
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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