Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H21
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       22   8.9  

>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 14/61 (22%), Positives = 24/61 (39%)
 Frame = +3

Query: 57  STCRVKSKISKTF*LTARRKDAKSVKIKKNPAECQVQGFDAQGSCTPWSSLTKRRLRNLS 236
           S C  K  +  +  L   +KD    KI ++P       +    +    SS  + +  NL+
Sbjct: 251 SICNSKWFVETSIILFLNKKDLFEEKIVRSPLTICFPEYTGSNTYEEASSYIRMKFENLN 310

Query: 237 R 239
           R
Sbjct: 311 R 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,118
Number of Sequences: 2352
Number of extensions: 4258
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)