Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H21
         (384 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical pr...    70   5e-13
Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical pr...    26   7.9  
Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical pr...    26   7.9  

>Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical
           protein C06B8.8 protein.
          Length = 70

 Score = 70.1 bits (164), Expect = 5e-13
 Identities = 35/71 (49%), Positives = 47/71 (66%)
 Frame = +2

Query: 62  MPREIKDIKDFLINGEEERRQIGQNKEEPXXXXXXXXXXXXFLYTLVITDKEKAEKLKQS 241
           MP+EIK+IKDFL+    +  +  + K+              +LYTLV+ DK+KAEKLKQS
Sbjct: 1   MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCAS-YLYTLVVADKDKAEKLKQS 59

Query: 242 LPPGLQVKEVK 274
           LPPG+QVKE+K
Sbjct: 60  LPPGIQVKELK 70


>Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical
           protein T22C1.10b protein.
          Length = 1291

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 188 GTLSIEALNLTFCRVLLYFDRFGVFPP 108
           GTL       T    +LYFDRF +F P
Sbjct: 149 GTLDGHVYFFTEQGTMLYFDRFSIFEP 175


>Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical
           protein T22C1.10a protein.
          Length = 1307

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 188 GTLSIEALNLTFCRVLLYFDRFGVFPP 108
           GTL       T    +LYFDRF +F P
Sbjct: 165 GTLDGHVYFFTEQGTMLYFDRFSIFEP 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,091,324
Number of Sequences: 27780
Number of extensions: 100173
Number of successful extensions: 278
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)