Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_H16
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78012-3|CAB01413.1| 118|Caenorhabditis elegans Hypothetical pr... 155 2e-38
AL132865-8|CAB60606.2| 102|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z81071-3|CAB03013.1| 91|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z78418-5|CAB01694.2| 361|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z69302-4|CAA93263.1| 125|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z81476-4|CAB03923.1| 707|Caenorhabditis elegans Hypothetical pr... 29 3.8
U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF067937-1|AAF99912.1| 533|Caenorhabditis elegans Hypothetical ... 28 6.7
Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z78012-3|CAB01413.1| 118|Caenorhabditis elegans Hypothetical
protein C52E4.3 protein.
Length = 118
Score = 155 bits (377), Expect = 2e-38
Identities = 78/114 (68%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Frame = +1
Query: 22 QPTPRSXXXXXXXXXXXXXXFSTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHC 201
Q PRS F+ GPLS+LT SVKNN QVLINCRNNKKLLGRVKAFDRHC
Sbjct: 4 QAKPRSEMTAEELAAKEDEEFNVGPLSILTNSVKNNHQVLINCRNNKKLLGRVKAFDRHC 63
Query: 202 NMVLENVKEMWTEVPRT-XXXXXXXAVNKDKFISKMFLRGDSVILVLRNPLATA 360
NMVLENVKEMWTEVP+T +V KD+FISKMFLRGDSVILV++NPLA A
Sbjct: 64 NMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVVKNPLAQA 117
>AL132865-8|CAB60606.2| 102|Caenorhabditis elegans Hypothetical
protein Y62E10A.12 protein.
Length = 102
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +1
Query: 94 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPRTXXXXXXX 273
PL +L S+ + +V + RN+++L GR++AFD+H NMVL V+E T
Sbjct: 17 PLDLLRLSL--DERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETITTREVDEDTFEEI 74
Query: 274 AVNKDKFISKMFLRGDSVILV 336
+ + +F+RGDSVILV
Sbjct: 75 YKQTKRVVPMLFVRGDSVILV 95
>Z81071-3|CAB03013.1| 91|Caenorhabditis elegans Hypothetical
protein F28F8.3 protein.
Length = 91
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +1
Query: 94 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 228
PL ++ + + + V++ +N+K+++G + FD + NMVLE+V E
Sbjct: 14 PLELIDKCIGSKIWVIM--KNDKEIVGTLTGFDDYVNMVLEDVVE 56
>Z78418-5|CAB01694.2| 361|Caenorhabditis elegans Hypothetical
protein F25D7.2 protein.
Length = 361
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = -3
Query: 589 LIVFSFILQYVNLIQFQYIKISSLFIYYI*L-QNHRTNTV 473
+++FS IL Y + +F + S+LFIY+I L +NH N V
Sbjct: 235 VLLFSAILLYSSFERFALVLCSALFIYFIQLRRNHARNRV 274
>Z69302-4|CAA93263.1| 125|Caenorhabditis elegans Hypothetical
protein F40F8.9 protein.
Length = 125
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/46 (32%), Positives = 30/46 (65%)
Frame = +1
Query: 91 GPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 228
G +S+ Q K ++L+ R+ +KL+G +++ D+ N++LE+V E
Sbjct: 10 GAISLFEQLDK---KLLVVLRDGRKLIGFLRSIDQFANLILEDVVE 52
>Z81476-4|CAB03923.1| 707|Caenorhabditis elegans Hypothetical
protein C25F9.5 protein.
Length = 707
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 197 CRSKAFTLPKSFLLLRQFIRTCVLFFTDCVS 105
CR KA+ + S LLLR +I V +C++
Sbjct: 636 CRKKAYAMSHSNLLLRNYILESVKSMEECIN 666
>U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical
protein F35D2.4 protein.
Length = 747
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 650 YFMLILTTILVRLF*CIIIITDRF*LYLTICELDTISI 537
Y L L +LVR+ I+TD F ++ +C L IS+
Sbjct: 566 YLSLALLQVLVRVLIVERIVTDPFHNFVDLCSLSNISV 603
>AF067937-1|AAF99912.1| 533|Caenorhabditis elegans Hypothetical
protein F22F7.4 protein.
Length = 533
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 494 LQLYVINKQTRYFNILKLYQ 553
LQLYV++ YFN+LK Y+
Sbjct: 198 LQLYVVSMVESYFNLLKEYE 217
>Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical
protein AC3.8 protein.
Length = 531
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 589 LIVFSFILQYVNLIQFQYIKISSLFIY-YI*LQNHRTNTVSN 467
L+VF F Y N++ + Y+ ++ +F Y ++ N +T++N
Sbjct: 5 LLVFLFFALYCNVLAYNYLVVAPVFGYSHMKFMNKVADTLAN 46
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 225 LNILQYHVTMPVESLHSTQEFLIVTAIYQNLCVV 124
L + Q+ + +ES+ QE +I IY+N C++
Sbjct: 535 LRLHQFTLFRTIESMTREQEEIIFANIYKNYCII 568
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,708,610
Number of Sequences: 27780
Number of extensions: 276791
Number of successful extensions: 633
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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