Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_H15
(665 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 272 5e-72
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 254 1e-66
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 227 2e-58
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 223 3e-57
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 198 1e-49
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 193 4e-48
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 192 6e-48
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 191 1e-47
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 180 4e-44
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 170 3e-41
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 162 6e-39
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 158 1e-37
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 158 1e-37
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 147 2e-34
UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome... 135 1e-30
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 98 2e-19
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 92 1e-17
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 77 4e-13
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 75 2e-12
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 75 2e-12
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 74 3e-12
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 73 8e-12
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 73 8e-12
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 71 3e-11
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 71 3e-11
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 71 3e-11
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 71 3e-11
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 71 3e-11
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 70 4e-11
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 70 4e-11
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 68 2e-10
UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 67 3e-10
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 66 5e-10
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 66 7e-10
UniRef50_A2BN27 Cluster: Proteasome beta; n=3; Desulfurococcales... 66 9e-10
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 66 9e-10
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 65 2e-09
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 64 2e-09
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 64 3e-09
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 63 5e-09
UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;... 63 7e-09
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 63 7e-09
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 62 1e-08
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 61 2e-08
UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2; ... 61 2e-08
UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome... 60 4e-08
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 60 5e-08
UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;... 60 5e-08
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 59 8e-08
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 58 1e-07
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 58 2e-07
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 58 2e-07
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 58 2e-07
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 57 3e-07
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 56 6e-07
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 56 6e-07
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 56 8e-07
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 54 3e-06
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 54 3e-06
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 54 4e-06
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 52 2e-05
UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precurso... 50 4e-05
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 49 1e-04
UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4... 48 3e-04
UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4... 46 8e-04
UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2; Caen... 46 0.001
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 45 0.002
UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4; Endo... 44 0.003
UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precurso... 44 0.003
UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 44 0.004
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 44 0.004
UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7; ... 43 0.006
UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 43 0.008
UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2... 42 0.010
UniRef50_P22141 Cluster: Proteasome component C11; n=36; Ascomyc... 42 0.013
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 42 0.013
UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5; Plas... 42 0.018
UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 42 0.018
UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-... 41 0.023
UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lambli... 41 0.031
UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2; Caen... 40 0.041
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 40 0.041
UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family pro... 40 0.071
UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n... 39 0.12
UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1; Para... 37 0.38
UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1; ... 37 0.50
UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1; ... 36 0.66
UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;... 36 0.88
UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome... 36 0.88
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 36 0.88
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 36 0.88
UniRef50_Q23FB2 Cluster: Proteasome, putative; n=5; Oligohymenop... 36 1.2
UniRef50_A4H5A4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10, mitoc... 35 1.5
UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giar... 35 2.0
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 34 2.7
UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B precur... 34 3.5
UniRef50_UPI00006CBD8D Cluster: hypothetical protein TTHERM_0031... 33 6.2
UniRef50_Q0VN61 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40; F... 33 8.2
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 272 bits (667), Expect = 5e-72
Identities = 120/181 (66%), Positives = 150/181 (82%)
Frame = +2
Query: 122 MSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 301
MSI+ YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY 481
QTV RLKF +NLYELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGL P +P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 482 VCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAI 661
+C++DLIGCP + FVVSGTC+EQ+YGMCE+LWEPN+ PD LF TISQA++NA D DA+
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180
Query: 662 S 664
S
Sbjct: 181 S 181
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 254 bits (622), Expect = 1e-66
Identities = 114/181 (62%), Positives = 140/181 (77%)
Frame = +2
Query: 122 MSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 301
MSIL +NG AV+ M G+DC AIA D RFG+ QT+ST+F KV+ +GP LYVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY 481
QTVF RL+F N+YEL+ENR ++P+T + MLSNLLYERRFGPYF+EPV+AG+ ++PY
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 482 VCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAI 661
V MDLIGC E FVVSGTC+EQ+YGMCE LWE N+ ELF ISQ ++NA + DAI
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 180
Query: 662 S 664
S
Sbjct: 181 S 181
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 227 bits (554), Expect = 2e-58
Identities = 103/181 (56%), Positives = 140/181 (77%)
Frame = +2
Query: 122 MSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 301
MSI YNG AVVAM G++C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY 481
QT++ RL F LY+L+E R M+P+TF++++S LLYE+RFGPYF +PVIAGL DN+P+
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGE-DNEPF 119
Query: 482 VCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAI 661
+C MD IG + FVVSGT SE LYG CE++++PN++P+ELF TISQAL ++ D D +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCL 179
Query: 662 S 664
S
Sbjct: 180 S 180
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 223 bits (545), Expect = 3e-57
Identities = 101/179 (56%), Positives = 137/179 (76%)
Frame = +2
Query: 122 MSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 301
MSI+ YNGGA++AMKG++ VAIA D+ FGIQAQ V+T+F ++F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY 481
Q V LKF +NLYELKE + ++P TF++M++N LYE+ FGPY+ +PVIAGL +P+
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 482 VCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDA 658
C++DLIG P + FVV+G+ +EQ+YGMCE+LWEPN+ P+ F TIS A++NA D A
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGA 179
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 198 bits (483), Expect = 1e-49
Identities = 93/187 (49%), Positives = 129/187 (68%), Gaps = 1/187 (0%)
Frame = +2
Query: 107 FYITNMSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQ-TVSTNFPKVFQMGPTLYVGLP 283
F+ I YNGGA+VAM G+ CVAIA DKR G+ Q TVS+NFPK F++ + +
Sbjct: 11 FHYNFGDITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAAS 70
Query: 284 GLATDTQTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXP 463
GLATD QT+ + F +N+Y+L+ ++ M KT S M+ ++LY RRFGP+F++ VIAGL
Sbjct: 71 GLATDVQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDT 130
Query: 464 YDNQPYVCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNA 643
D+ PY+ DL+G P P FVV+GTCSEQLYG+CEAL++P + P++LF T+SQ L+
Sbjct: 131 -DSSPYITCFDLVGAPCTPTDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAG 189
Query: 644 ADXDAIS 664
D D +S
Sbjct: 190 IDRDCLS 196
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 193 bits (470), Expect = 4e-48
Identities = 87/180 (48%), Positives = 124/180 (68%), Gaps = 1/180 (0%)
Frame = +2
Query: 128 ILXYNGGAVVAMKGQDCVAIATDKRFGI-QAQTVSTNFPKVFQMGPTLYVGLPGLATDTQ 304
++ YNG A+VAM G CV IA+D R+G+ Q QTV K FQ+ +VG+ GLATD Q
Sbjct: 4 LMDYNGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQ 63
Query: 305 TVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYV 484
T+ L F + L+ L+E R M+P+T ++S++LYE+RFGPYF EPV+AGL D+ P++
Sbjct: 64 TMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDK-DHNPFL 122
Query: 485 CNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
C D IG ++ + FVVSGT SEQL+G+CE+ W P + DELF T++Q L++A D D ++
Sbjct: 123 CAFDFIGAMSKAQDFVVSGTSSEQLFGVCESFWRPKMNKDELFETLAQCLLSAVDRDCLA 182
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 192 bits (468), Expect = 6e-48
Identities = 88/181 (48%), Positives = 120/181 (66%)
Frame = +2
Query: 122 MSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 301
MSI+ Y GG VVAM G +CV IA+D R G Q T++T+ KV ++ +YVGL G +D
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY 481
+TV ++ F NLYEL+ENR ++P+ S M+SNL Y+ RFG YF EP++AGL N+PY
Sbjct: 61 RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDD-TNKPY 119
Query: 482 VCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAI 661
+C MD IGC + P FV GT E L G+CE W N+KPDELF +Q++++ + DA
Sbjct: 120 ICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAA 179
Query: 662 S 664
S
Sbjct: 180 S 180
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 191 bits (465), Expect = 1e-47
Identities = 83/181 (45%), Positives = 124/181 (68%)
Frame = +2
Query: 122 MSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 301
MSIL Y+GG+ +AM G++C + +D R G Q +T+S PK+ + + +GL GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQ 60
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY 481
QT ++ F +Y+L+E R + K F+A++S++LYE RFGP+F+EPVI + + Y
Sbjct: 61 QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 482 VCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAI 661
+C DLIG P EPE +V +GTC+E L+GMCEALW P L+P+ELF +QA+++A D D++
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSL 180
Query: 662 S 664
S
Sbjct: 181 S 181
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 180 bits (437), Expect = 4e-44
Identities = 83/181 (45%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
Frame = +2
Query: 125 SILXYNGGAVVAMKGQDCVAIATDKRFGIQA-QTVSTNFPKVFQMGPTLYVGLPGLATDT 301
SI+ YNGGA++AMKG++CVA ATD R G +T+ST+F KV + +G GLATD
Sbjct: 1 SIMTYNGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDI 60
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY 481
T+ +KF NLY L+E R + K S M +++LY +RF PYF+EP++AGL +N P+
Sbjct: 61 HTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGL-DNNNVPF 119
Query: 482 VCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAI 661
+ DLIGC + F +SGT QL+G+CE+ + P+L+PDEL +SQ +++ D DA
Sbjct: 120 IAGYDLIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAF 179
Query: 662 S 664
S
Sbjct: 180 S 180
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 170 bits (413), Expect = 3e-41
Identities = 89/192 (46%), Positives = 117/192 (60%), Gaps = 12/192 (6%)
Frame = +2
Query: 125 SILXYNGGAVVAMKGQDCVAIATDKRFGIQA-QTVSTNFPKVFQMGPTLYVGLPGLATDT 301
SI YNGG V+ M G CVAIA D R G TVSTNF K+F+M +YVGL GLATD
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDI 62
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDN--- 472
QT++ L++ +NLYE+++ M F+ MLS++LY RF PYF+ P++ G
Sbjct: 63 QTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDD 122
Query: 473 --------QPYVCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQ 628
+PY+ DLIG E + FVV+G SEQLYGMCE+L+ + D LF TISQ
Sbjct: 123 EGKKVCSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQ 182
Query: 629 ALVNAADXDAIS 664
L++A D D +S
Sbjct: 183 CLLSALDRDCLS 194
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 162 bits (394), Expect = 6e-39
Identities = 78/171 (45%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
Frame = +2
Query: 155 VAMKGQDCVAIATDKRFGI-QAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFX 331
VAM G+DCVAIA+D R GI Q QT + ++ K+ ++ L++GL GL D T+ +L+F
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 332 MNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLIGCP 511
++YEL+ENR+M PK F++++S LYE+RF PY+ EPV+AGL D +PY+ +MDLIG
Sbjct: 70 HDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDK-DGKPYITSMDLIGAD 128
Query: 512 NEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
+ FVV+G E L+G+CE+ + +L+PDELF I L + D +S
Sbjct: 129 ASADDFVVAGDNVESLFGVCESFYRKDLEPDELFNVIGNCLNAGVNRDCLS 179
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 158 bits (384), Expect = 1e-37
Identities = 74/181 (40%), Positives = 116/181 (64%), Gaps = 1/181 (0%)
Frame = +2
Query: 125 SILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVST-NFPKVFQMGPTLYVGLPGLATDT 301
+I YNG A++ +KG DCVA+A DKR G QT++ N ++F++ + +GL GL TD
Sbjct: 3 NIWEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY 481
T + +++ NLY L+E+R +RP+ + M+S+ LY+ RFGPYFI P+IAG D +PY
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEA-DGKPY 121
Query: 482 VCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAI 661
+ MD IGC ++ F ++GT S+ L G+CE +P++ DE+ + Q + +A + DA
Sbjct: 122 LGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAY 181
Query: 662 S 664
S
Sbjct: 182 S 182
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 158 bits (383), Expect = 1e-37
Identities = 75/176 (42%), Positives = 108/176 (61%)
Frame = +2
Query: 137 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFX 316
+ GG+++AM VAI DKR G+ + TVS +F ++ ++GP LYVGLP DTQ +
Sbjct: 7 FYGGSILAMASSKGVAIMCDKRLGMSSITVSKDFTRIHRIGPRLYVGLPAFVPDTQVLLR 66
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
+++ NL+ L+ R M P+ S+M+S LLY +R PY P++AGL D +PY+ MD
Sbjct: 67 KIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTS-DGKPYISGMD 125
Query: 497 LIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
IG P FV GT + L G+CEAL+ P++ + LF T QA +NA D DA+S
Sbjct: 126 CIGSIASPGDFVAVGTADKNLMGICEALYRPDMDEENLFVTCVQAFLNAIDRDALS 181
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 147 bits (356), Expect = 2e-34
Identities = 73/179 (40%), Positives = 109/179 (60%)
Frame = +2
Query: 128 ILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQT 307
I Y+GGAVV M G+ CVAIA D R+G++ Q S NF KVFQ+ G GL +D QT
Sbjct: 5 ISYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQT 64
Query: 308 VFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVC 487
+ ++K+ NLY L+E + P+ +++LY++RF PY++ P+IAG+ N YVC
Sbjct: 65 MAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNS-YVC 123
Query: 488 NMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
+ D IG P + V GT S +L GMC++ ++ ++P+EL + Q L+ A + DA S
Sbjct: 124 SYDYIGSPEISQVGCV-GTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAFS 181
>UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3; n=1; Equus
caballus|Rep: PREDICTED: similar to Proteasome (prosome,
macropain) subunit, beta type, 3 - Equus caballus
Length = 168
Score = 135 bits (326), Expect = 1e-30
Identities = 66/145 (45%), Positives = 95/145 (65%)
Frame = +2
Query: 224 VSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNL 403
++T+ K+F MG L + L GLAT+ QT LKF +NL EL E ++P T ++++NL
Sbjct: 2 LTTDLQKIFPMGEWLDISLTGLATNFQTTAQHLKFQLNLCELNEGSQIKPYTLMSVMANL 61
Query: 404 LYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALW 583
LY+++FGP + EPVIA L P++C++DLI CP + FVVS TC+EQ+ GMCE+L
Sbjct: 62 LYKKQFGPCYTEPVIAWLDLKTFTPFLCSLDLISCPVVTDDFVVSSTCAEQMCGMCESLG 121
Query: 584 EPNLKPDELFXTISQALVNAADXDA 658
+ L T+SQA++NA D DA
Sbjct: 122 AHHA---HLLETVSQAMLNAVDGDA 143
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus anatinus
Length = 181
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/62 (70%), Positives = 53/62 (85%)
Frame = +2
Query: 125 SILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQ 304
SI+ YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD Q
Sbjct: 26 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 85
Query: 305 TV 310
TV
Sbjct: 86 TV 87
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 548 SEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
S+ + CE+ +P+ LF TISQA++NA D DA+S
Sbjct: 122 SQSPHARCES---SRREPEHLFETISQAMLNAVDRDAVS 157
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 91.9 bits (218), Expect = 1e-17
Identities = 45/164 (27%), Positives = 86/164 (52%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
GG VVA+ G+D + IA+D G + K+F++ + +G+ GL D L
Sbjct: 5 GGCVVAILGKDSLCIASDSENGSVSYLTEFKTQKIFKLHEDIIIGIVGLLGDIYGFKEIL 64
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
++ +++ KE + M P +++S LLY++RF PY +E ++AG + +P++ +D I
Sbjct: 65 EYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTE-NGKPFLGTVDCI 123
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQAL 634
G + + G E ++ + + LW P + EL +S+++
Sbjct: 124 GAISYISNYACIGNLCENIFPLIQFLWRPGMDLKELIILVSKSM 167
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 77.0 bits (181), Expect = 4e-13
Identities = 48/174 (27%), Positives = 85/174 (48%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V +K +D V +A +KR T+S+ KVF + L + G+ D QT+ L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
K YEL+ R + + +LS +++ RRF P+F E ++ G+ + P++ MD +
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGID--EEGPHLIVMDPL 125
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G E + + GT ++ + + + P++ +E QAL A + D +S
Sbjct: 126 GSLIE-DNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQALKAAIERDPVS 178
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 74.9 bits (176), Expect = 2e-12
Identities = 48/176 (27%), Positives = 82/176 (46%)
Frame = +2
Query: 137 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFX 316
Y G V + +D V +AT+KR + S K++Q+ + + G D Q +
Sbjct: 9 YKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLAR 68
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
+K NLYE++ R + + + SNLL R+ PY ++ +I G+ Y ++D
Sbjct: 69 IIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIY--SID 126
Query: 497 LIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
IG E + V +G+ S YG+ E + P + DE +A+ +A D+ S
Sbjct: 127 PIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSAS 182
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/141 (29%), Positives = 72/141 (51%)
Frame = +2
Query: 137 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFX 316
+NGG V+A+ G+D +A+D R S + PK +++ T +G G D T+
Sbjct: 32 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 91
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
++ + +Y+ N+ M +AMLS +LY RRF PY++ +I GL + + V + D
Sbjct: 92 IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDE-EGRGAVYSFD 150
Query: 497 LIGCPNEPEXFVVSGTCSEQL 559
+G + + + G+ S L
Sbjct: 151 PVG-SYQRDTYKAGGSASAML 170
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 74.1 bits (174), Expect = 3e-12
Identities = 46/175 (26%), Positives = 82/175 (46%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
+G V + D V +A DKR S K+ + + + + GL D Q +
Sbjct: 24 SGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDV 83
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
L+ + LYE+ + +++LSN+L+ +F PY ++ ++ G YD QP + +DL
Sbjct: 84 LREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGG---YDTQPRLYTLDL 140
Query: 500 IGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G E + + +G+ S YG+ E + +L +E + A+ +A DA S
Sbjct: 141 FGSITE-DKYTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAAS 194
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 72.5 bits (170), Expect = 8e-12
Identities = 49/173 (28%), Positives = 86/173 (49%)
Frame = +2
Query: 146 GAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLK 325
G V ++ D V +A +KR +S + KV+++ + + GL D QT+ ++
Sbjct: 6 GTTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVE 65
Query: 326 FXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLIG 505
M LYEL N + T + +LS +LYERR PY+ E V+ GL + Y ++D IG
Sbjct: 66 AEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSHLY--SLDPIG 123
Query: 506 CPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
E + +V G+ ++ + E+ ++ ++ DE +++ A DA S
Sbjct: 124 AIIE-DDYVALGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDAAS 175
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/141 (27%), Positives = 71/141 (50%)
Frame = +2
Query: 137 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFX 316
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
++ + +Y+ N+ M +AMLS +LY RRF PY++ +I GL + + V + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 153
Query: 497 LIGCPNEPEXFVVSGTCSEQL 559
+G + + F G+ S L
Sbjct: 154 PVG-SYQRDSFKAGGSASAML 173
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 70.9 bits (166), Expect = 3e-11
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V + V +A D+R + K+F++ + V G D Q + +
Sbjct: 10 GTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDLM 69
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
+ LYEL+ NRM+ + + M+S++L+ + F PY ++ ++ G D+ P + N+D
Sbjct: 70 RAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFN--DDDPALYNLD 127
Query: 497 LIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXD 655
G E E + +G+ S YG+ EA +E + D+ +A+ +A + D
Sbjct: 128 PSGSIIE-EDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERD 179
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 70.9 bits (166), Expect = 3e-11
Identities = 44/174 (25%), Positives = 88/174 (50%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V + +D V +AT++R ++ + N K+FQ+ + + GL D Q + +
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYM 67
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
K + LY L+ M + + +LSN+L + ++ PY ++ ++ G+ D P+V ++D
Sbjct: 68 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI---DTAPHVFSIDAA 124
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G E + + +G+ S +YG+ E+ + + DE + +A+ A D+ S
Sbjct: 125 GGSVE-DIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSAS 177
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 70.9 bits (166), Expect = 3e-11
Identities = 40/122 (32%), Positives = 61/122 (50%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
NGG++VA+ G D IA D R S K+F++ P +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGS 87
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
+K M YE R M + + MLS +Y RRF PY++ ++AG+ + + V + D
Sbjct: 88 IKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGI-DNEGKGVVYSYDP 146
Query: 500 IG 505
IG
Sbjct: 147 IG 148
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 70.5 bits (165), Expect = 3e-11
Identities = 43/176 (24%), Positives = 85/176 (48%)
Frame = +2
Query: 131 LXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV 310
+ + G + ++ +D V +A DKR +S NF K+F + + + GL D +
Sbjct: 1 MSFAGATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGL 60
Query: 311 FXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCN 490
++ M L L+ + + + LS+LLY +F P+ +E ++ G+ P +P +
Sbjct: 61 VRIVEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDP-GGEPKLYV 119
Query: 491 MDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDA 658
+D +G E E +V +GT + +G+ E +++ + +E +AL + DA
Sbjct: 120 LDPLGSIIE-EDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEALRASMARDA 174
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 70.5 bits (165), Expect = 3e-11
Identities = 43/174 (24%), Positives = 81/174 (46%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V + D V +ATDKR + K++++ + + + G D Q + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
LY+++ R + P + +LSN+L+ R P+ + +I G + + ++D +
Sbjct: 66 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAK-LFSLDPL 124
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G NE + F +G+ S YG+ EA ++ ++ +E AL +A + D S
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFS 178
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 70.1 bits (164), Expect = 4e-11
Identities = 43/174 (24%), Positives = 82/174 (47%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V + V A++KR VS K F + P + GL D Q + ++
Sbjct: 7 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 66
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
+ +++ R + P T + M+SN++YERR+ P + ++ G+ ++P + +D +
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV---DKPIMYTLDPL 123
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G P+ + GT +E G+ + ++PN+ DE +A+ A+ D+ S
Sbjct: 124 GSV-LPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSAS 176
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 70.1 bits (164), Expect = 4e-11
Identities = 45/174 (25%), Positives = 84/174 (48%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V +K D V +ATD R + S + KV ++ P + + G + Q + L
Sbjct: 49 GTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLISTL 108
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
K +LYE + + M + S + NLL F Y ++P++ G+ D ++ ++D +
Sbjct: 109 KAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVD--DEGSHIYSIDAL 164
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G E E + V+G+ S+ G+ E ++ ++ DE ++A+ +A + D S
Sbjct: 165 GGTTE-EEYTVTGSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVERDLAS 217
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 67.7 bits (158), Expect = 2e-10
Identities = 48/173 (27%), Positives = 78/173 (45%)
Frame = +2
Query: 146 GAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLK 325
G V+ +K + V IA +KR +S N KV + + +G GL D Q + L+
Sbjct: 18 GTVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALR 77
Query: 326 FXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLIG 505
YEL+ R +R + + +LS +LY + P E V+ G Q YV +D +G
Sbjct: 78 MEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQIYV--LDPVG 135
Query: 506 CPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
E + +V G+ G+ E + ++ DE A+ A + DA+S
Sbjct: 136 SLIE-DKYVALGSGGPIALGIIEKEYREDIDVDEAEKLAVSAIREAIERDAVS 187
>UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 203
Score = 67.3 bits (157), Expect = 3e-10
Identities = 45/174 (25%), Positives = 84/174 (48%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G ++A+K D V I D R + A S K+ Q+ ++V G + DTQ + L
Sbjct: 10 GTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYL 69
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
+ +++Y E+ + + + +A+ S ++YE P + +I + YD++P V N+ L
Sbjct: 70 RMYLSMYSQLEDSIPQVQRAAALASKIIYE---NPSLLAGLI--VAGYDDKPRVFNISLG 124
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G E + + + G+ S +YG C+ W + +E + A+ A + D S
Sbjct: 125 GSLTERD-WAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSCAINRDNAS 177
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 66.5 bits (155), Expect = 5e-10
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 9/181 (4%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFX 316
NGG V+A + IA D R Q + T F K+F++ +G G+ D +
Sbjct: 14 NGGTVIAATWNNYAVIAADTRLS-QRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQS 72
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
L+ + LY NR + +LS +LY RRF PY+ ++ G+ + VC D
Sbjct: 73 VLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDE-QGKGVVCGYD 131
Query: 497 LIGCPNEPEXFVVSGTCSEQLYGMCEALWEPN---LKP-----DELFXTISQALVNAADX 652
+G N E + GT S + + + L N +KP ++L + A+V+A +
Sbjct: 132 AVGNYNY-EKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAMVSAVER 190
Query: 653 D 655
D
Sbjct: 191 D 191
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 66.1 bits (154), Expect = 7e-10
Identities = 35/122 (28%), Positives = 63/122 (51%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
NGG V+ + G+D V +A D R + + + PK+ ++ +G G+ +D +T+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
LK + L+ L+ + +L +LY RRF PY+ ++AG+ D++ + N D
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVS-NDSKGVLYNYDA 155
Query: 500 IG 505
IG
Sbjct: 156 IG 157
>UniRef50_A2BN27 Cluster: Proteasome beta; n=3;
Desulfurococcales|Rep: Proteasome beta - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 212
Score = 65.7 bits (153), Expect = 9e-10
Identities = 44/174 (25%), Positives = 77/174 (44%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V + +D V +A D+R K+ ++ + + GL D Q + L
Sbjct: 15 GTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQMLAEWL 74
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
+ YE+ R M + LS +L+ +F PY ++ ++ G YD QP + N+D
Sbjct: 75 ANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGG---YDTQPRLYNIDWF 131
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G E E +V +G+ S G+ E + PNL +E +A+ ++ D +
Sbjct: 132 GSVTE-EKYVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFT 184
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 65.7 bits (153), Expect = 9e-10
Identities = 41/174 (23%), Positives = 80/174 (45%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V + V +A++KR VS N K FQ+ P + GL D Q + ++
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
+ ++ R + P + + M+SN++YERRF P + ++ G+ +P + +D +
Sbjct: 63 SALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGVV---GEPAIYTLDSL 119
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G P+ + GT +E G+ + ++ + + + + +AA D+ S
Sbjct: 120 GSV-LPDEYAAVGTGAEMALGVLDPQFKSGMSEKDAVDLAVRGIRSAALRDSFS 172
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTN-FPKVFQMGPTLYVGLPGLATDTQTVFX 316
NGG V+A+ G+D IA D R + T + K+FQ+ + G+ DT +
Sbjct: 29 NGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQADTIALQK 88
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
RLK + +E + + M + LSN LY +RF PY+ ++AG+ + ++ D
Sbjct: 89 RLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDE-QGEGWIWTYD 147
Query: 497 LIG 505
+G
Sbjct: 148 AVG 150
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/154 (25%), Positives = 73/154 (47%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
N G V +KG+D V IA+D R ++ N K++ + G+ D + + +
Sbjct: 27 NCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELTDQ 86
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
+K + Y+ + + M ++ + +LSN LY RF PY+ ++AG+ + N D
Sbjct: 87 IKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINS-KGKAVTYNYDA 145
Query: 500 IGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKP 601
+G E + SG+ E Y + ++L + +P
Sbjct: 146 VG-SFEERKYSCSGSGEELAYPLLDSLLKDRTEP 178
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFX 316
NGG+++A+ G+D IA D R + ++ T + KV+Q+ + + G A D
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVK 88
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
R+K + YE N+ M K+ + M+ +LY +RF PY++ ++ G+ D V + D
Sbjct: 89 RVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEE-DGSGAVYSFD 147
Query: 497 LIG 505
+G
Sbjct: 148 PVG 150
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFX 316
NGG ++ + G+D +A D R I ++++ + PKVF G + + G A D +
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVK 85
Query: 317 RLKFXMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNM 493
R K + Y N + + + + + +LLY +RF PY++ +IAGL D + V +
Sbjct: 86 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDE-DGKGAVYSF 144
Query: 494 DLIG 505
D +G
Sbjct: 145 DPVG 148
>UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;
Eukaryota|Rep: Proteasomal subunit beta type III - Mus
musculus (Mouse)
Length = 48
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +2
Query: 188 ATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV 310
A D+RFGIQAQ V+T+F K+F MG LY+GL GLATD QTV
Sbjct: 8 AADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 48
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 62.9 bits (146), Expect = 7e-09
Identities = 35/122 (28%), Positives = 59/122 (48%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
NGG ++A+ G D IA D R +S N KVF + + G+ D Q +
Sbjct: 54 NGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLLKH 113
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
+K Y LK + + + F +LS ++Y RR P++ ++AG+ + + V + D+
Sbjct: 114 MKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDS-EGRGAVYSYDV 172
Query: 500 IG 505
IG
Sbjct: 173 IG 174
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/129 (28%), Positives = 59/129 (45%)
Frame = +2
Query: 119 NMSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 298
N S NGG VA+ G D IA D R +S ++ K+ ++ + G D
Sbjct: 7 NWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQAD 66
Query: 299 TQTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQP 478
+ + LK +Y+ + N+ M + +LSN LY +RF PY+ V+ GL + +
Sbjct: 67 VKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE-EGKG 125
Query: 479 YVCNMDLIG 505
V D +G
Sbjct: 126 CVFTYDAVG 134
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
N G + +K D + +A D R S K+FQ+G L G G DT V+ +
Sbjct: 89 NSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTG-TGFYADTHEVYVK 147
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
+ + + YE+ ++ + + + +LS +LY +RF PY+ V++G +PYV + D
Sbjct: 148 MVYEIRQYEVDDS--INIHSAANLLSKILYSKRFFPYYSFCVLSGFE--KGKPYVYSYDP 203
Query: 500 IG 505
IG
Sbjct: 204 IG 205
>UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 124
Score = 61.3 bits (142), Expect = 2e-08
Identities = 44/113 (38%), Positives = 50/113 (44%)
Frame = -3
Query: 477 GWLS*GXRPAMTGSIK*GPKRRSYNKFDNIAENVLGRIILFSFNSYKFIXNFSL*NTVWV 298
G LS PA G GP SYN NV G I+ S N YK + N +
Sbjct: 3 GLLSLLLNPATMGLTNQGPNLLSYNDELTKFANVDGSILRSSRNLYKLVLNLNNSFKEIT 62
Query: 297 SVARPGRPTYNVGPIWNTFGKLVDTV*ACIPNRLSVAMATQSWPFMATTAPPL 139
SVA P P + P F KL+ T C PN S +A Q P MAT APPL
Sbjct: 63 SVANPVNPKKVLSPTSKIFSKLLLTPSDCCPNLKSSPIAIQPLPIMATAAPPL 115
>UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3, partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Proteasome (prosome, macropain) subunit, beta type, 3,
partial - Ornithorhynchus anatinus
Length = 104
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +2
Query: 416 RFGPYFIEPVIAGLXPYDNQPYVCNMDLIGCPNEPEXFVV 535
RFGPY+ EPVIAGL P +P++C++DLIGCP + FVV
Sbjct: 65 RFGPYYTEPVIAGLDPTTFEPFICSLDLIGCPMVTDDFVV 104
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 60.1 bits (139), Expect = 5e-08
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 2/176 (1%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVST-NFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
G +V + QD V +A+D R + + +S N KV ++ P + + G Q+
Sbjct: 60 GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRS 119
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYF-IEPVIAGLXPYDNQPYVCNMD 496
L+ NLYE + M S M SNLL R GP+F + P++ G+ D+ +V ++D
Sbjct: 120 LRAEANLYEARRGEYMSIDALSTMASNLL---RGGPFFRVVPILGGVD--DDGGHVFSLD 174
Query: 497 LIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G + + + G+ G+ E + +L + + A+ +A++ D S
Sbjct: 175 PAG-SSMSDTYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTAS 229
>UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;
Sulfolobaceae|Rep: Proteasome subunit beta precursor -
Sulfolobus solfataricus
Length = 208
Score = 60.1 bits (139), Expect = 5e-08
Identities = 42/174 (24%), Positives = 79/174 (45%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V ++ D V +A D+R + KV + + + G D Q ++ L
Sbjct: 14 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 73
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
K + + + + K + L+N+L ++ PY ++ +I G YD+QP + N+D +
Sbjct: 74 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGG---YDDQPRLFNLDYL 130
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G E E +V +G+ S G+ E + P + DE +A+ +A D+ +
Sbjct: 131 GDITE-ENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFT 183
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 59.3 bits (137), Expect = 8e-08
Identities = 38/135 (28%), Positives = 62/135 (45%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
NGG+ VA+ G D V IA D R + S + K Q+ + G+ D +
Sbjct: 43 NGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLADINALRKT 102
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
L + LYE + N+ + +LS +LY +RF PY+ +++GL + V D
Sbjct: 103 LLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDE-QGKGVVYGYDA 161
Query: 500 IGCPNEPEXFVVSGT 544
+G ++ FV G+
Sbjct: 162 VGSFDQ-HKFVALGS 175
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/123 (25%), Positives = 59/123 (47%)
Frame = +2
Query: 137 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFX 316
+N G V A+ D V +A DKR VS + K+ ++ +++ G+ D +
Sbjct: 41 FNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADFAALSK 100
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
+L +++Y+ + + +++LS LY +RF PY+ ++AG + V N D
Sbjct: 101 QLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDD-KGEGLVINYD 159
Query: 497 LIG 505
+G
Sbjct: 160 AVG 162
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/97 (28%), Positives = 49/97 (50%)
Frame = +2
Query: 167 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFXMNLYE 346
G D +A D R S PKVF +G + V G + D + +K + LY
Sbjct: 42 GDDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILVTANGFSADGDALIENIKQHVELYH 101
Query: 347 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGL 457
+ N+ ++ ++ + + ++LY +RF PY++ +IAGL
Sbjct: 102 YQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGL 138
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 58.0 bits (134), Expect = 2e-07
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGP----TLYVGLPGLATDTQ 304
NGGA + + G D +A D R ++T + PKVF + ++ + + G A D +
Sbjct: 13 NGGATLGVSGPDFAILAGDTR-STAGYNINTRYEPKVFTIQDARDRSIVISVIGFAADGR 71
Query: 305 TVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYV 484
+ RL + +Y+ + + + + + +S +LYE+RF PY ++ ++AG+ D Q +
Sbjct: 72 ALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDA-DGQGAI 130
Query: 485 CNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAA 646
D GC E +G S + ++ P L+P L +Q LV A
Sbjct: 131 YYYDPAGC-IEKRSHCAAGEASSLMLPFLDS-QAPRLQP--LSLQTAQQLVRDA 180
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPT--------LYVGLPGLA 292
NGG+ + + G+D +A D R + ++T + PK+F++G L + + G A
Sbjct: 40 NGGSTLGIAGKDYAILAGDTR-SVSGYNINTRYAPKLFKIGEGDECGEGAHLVLSVVGFA 98
Query: 293 TDTQTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDN 472
D + + RL + +Y+ K + M + L+ +LY +RF PY++ ++AG+ D
Sbjct: 99 ADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDE-DG 157
Query: 473 QPYVCNMDLIG 505
+ + + D +G
Sbjct: 158 KGALYSYDPVG 168
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/122 (27%), Positives = 56/122 (45%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
NGG VA+ G D +A D R + ++ + K+ ++ + G D + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKN 71
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
L LY+ + N+ M + +LSN LY +RF PY+ V+ GL + + V D
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS-EGKGCVFTYDA 130
Query: 500 IG 505
+G
Sbjct: 131 VG 132
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 57.2 bits (132), Expect = 3e-07
Identities = 42/181 (23%), Positives = 80/181 (44%)
Frame = +2
Query: 122 MSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 301
MS G V ++G V +A +KR +S KV+++ L + L GL D
Sbjct: 1 MSYEYGTGATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADL 60
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY 481
Q + L+ + Y + R + + + +L+ +LY ++ P+ E ++ GL D
Sbjct: 61 QAISKILRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEA-DGTAK 119
Query: 482 VCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAI 661
+ MD +G E + + G+ + G+ E + ++ D+ A+ A + DA+
Sbjct: 120 LYVMDPLGSLIE-DDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAVRAAIERDAM 178
Query: 662 S 664
S
Sbjct: 179 S 179
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/106 (25%), Positives = 49/106 (46%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
+GG + + G D V I D R + S + ++F+M + G D R
Sbjct: 19 HGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDIDAFITR 78
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGL 457
++ + YE + M ++ + +SN LY +RF PY+I ++ G+
Sbjct: 79 MRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGI 124
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 56.4 bits (130), Expect = 6e-07
Identities = 40/170 (23%), Positives = 80/170 (47%)
Frame = +2
Query: 155 VAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFXM 334
V +K D + +A+++R +S KV+++ L G G+ D QT+ + +
Sbjct: 9 VGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKINKFLMAGA-GIYGDLQTLTRIMNVEI 67
Query: 335 NLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLIGCPN 514
YE+ + + + +LS +LY+ + P+ E + G+ Q YV +D IG
Sbjct: 68 KYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQLYV--LDPIGSLI 125
Query: 515 EPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
E + + G+ + G+ E+ ++PN+ D I++A+ + + D S
Sbjct: 126 E-DNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKAIKASIERDITS 174
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 56.0 bits (129), Expect = 8e-07
Identities = 40/176 (22%), Positives = 79/176 (44%)
Frame = +2
Query: 137 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFX 316
+ G V + D V +A D+R + + N K+ ++ L + G D +
Sbjct: 8 FKGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVR 67
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
L+ LY + + M K + +L+N+L R PY ++ G +D +P + ++D
Sbjct: 68 LLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGG---FDEKPRLYSVD 124
Query: 497 LIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
++G E + +V +G+ E Y + ++ + +LK E +A+ +A D S
Sbjct: 125 MMGGITE-DKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFS 179
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/121 (23%), Positives = 57/121 (47%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V ++ +D V +A D + + + N K+ + + + G D Q + L
Sbjct: 6 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 65
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
+ Y+ R M + + +LSN+L E ++ PY ++ +I G Y ++P + N+D +
Sbjct: 66 EAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGG---YVDEPTIANLDPL 122
Query: 503 G 505
G
Sbjct: 123 G 123
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 54.0 bits (124), Expect = 3e-06
Identities = 36/174 (20%), Positives = 84/174 (48%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V + +D V A+++R + K+F++ + + G D Q + +
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
+ ++LY+++ N + K +++ +N+L R GP +++ ++ G+ ++P + ++D
Sbjct: 68 EAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMD--GDKPSLYSLDPA 122
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G E + ++ +G+ S YG+ E + + DE +A+ A++ D S
Sbjct: 123 GGMIE-DTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFS 175
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 53.6 bits (123), Expect = 4e-06
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Frame = +2
Query: 152 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFX 331
++ +K +D V +A+DK+ + K+ + + + G D Q + LK
Sbjct: 4 IIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKTE 63
Query: 332 MNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY-VCNMDLIGC 508
+ L EL R M + +LS+LLY+ RF + +IAG P +++ + + ++D IG
Sbjct: 64 LKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAG--PINSKEFGIYSLDGIGA 121
Query: 509 PNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
+E + + G+ G EA + P++ + +AL ++ D S
Sbjct: 122 ISEIKDYFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFS 173
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 51.6 bits (118), Expect = 2e-05
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRF-GIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFX 316
NGG + A+ G + V + D R G ++ K+F++ +++ G+ D +
Sbjct: 51 NGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQ 110
Query: 317 RLKFXMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVC-N 490
LK+ + Y+ ++ K + + S +LY+RRF PY+ +I G+ + VC +
Sbjct: 111 MLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGID--EKGAGVCYS 168
Query: 491 MDLIGCPNEPEXFVVSGTCSEQLYGMCEAL 580
D +G EP + G+ S + + + L
Sbjct: 169 YDPVG-STEPFRYGTCGSASSFVEPLLDCL 197
>UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precursor;
n=93; Metazoa|Rep: Proteasome subunit beta type-8
precursor - Homo sapiens (Human)
Length = 276
Score = 50.4 bits (115), Expect = 4e-05
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 1/183 (0%)
Frame = +2
Query: 119 NMSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 298
N+ I +G +A K Q V A D R + + KV ++ P L + G A D
Sbjct: 64 NVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAAD 123
Query: 299 TQTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQ- 475
Q L LY L+ + S +LSN++ + R + +I G +D +
Sbjct: 124 CQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICG---WDKKG 180
Query: 476 PYVCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXD 655
P + +D G F +G+ + YG+ ++ + PNL P+E + +A+ A D
Sbjct: 181 PGLYYVDEHGTRLSGNMFS-TGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 239
Query: 656 AIS 664
+ S
Sbjct: 240 SYS 242
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 48.8 bits (111), Expect = 1e-04
Identities = 35/122 (28%), Positives = 54/122 (44%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
N G V+A+ V +A D R +S + K+ Q+ + G D +
Sbjct: 35 NSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQYADFIALRKF 94
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
L+ + LYE + +T + +LS LY RRF PY+ ++AGL +N V D
Sbjct: 95 LQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDE-NNHGVVYGYDA 153
Query: 500 IG 505
IG
Sbjct: 154 IG 155
>UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4;
n=3; Sophophora|Rep: Probable proteasome subunit beta
type-4 - Drosophila melanogaster (Fruit fly)
Length = 268
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G +V+ ++ V +A D + N +VF++ + +G G D Q++ +
Sbjct: 57 GTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNI 116
Query: 323 KFXMNLYEL-KENRMMRPKTFSAMLSNLLYER--RFGPYFIEPVIAGLXPYDNQPYVCNM 493
M + +N M+PK+ ++ ++ +LY R R P +I+ V+ G+ + PY+ N+
Sbjct: 117 DQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGV-DNEGTPYLANV 175
Query: 494 DLIG 505
DL G
Sbjct: 176 DLRG 179
>UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4;
n=17; Ascomycota|Rep: Probable proteasome subunit beta
type-4 - Schizosaccharomyces pombe (Fission yeast)
Length = 262
Score = 46.0 bits (104), Expect = 8e-04
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G +V+A+K D V IA D + + ++ ++G VG G +D Q + L
Sbjct: 43 GSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLL 102
Query: 323 -KFXMNLYELKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLXPYDNQPYVCNM 493
K + + ++P LS +LY RR PY+ + ++AG+ + +PYV
Sbjct: 103 EKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFA 162
Query: 494 DLIG 505
DL G
Sbjct: 163 DLRG 166
>UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 239
Score = 45.6 bits (103), Expect = 0.001
Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 1/175 (0%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G ++AM+ V + TD R + S K+ + + V G A DTQ +
Sbjct: 23 GTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIA 82
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGL-XPYDNQPYVCNMDL 499
K+ +++Y + EN+ + S + LY R ++AG Q Y
Sbjct: 83 KYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR-EQLSASVLVAGWDEELGGQVYAIP--- 138
Query: 500 IGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
IG + SG+ S + G ++ W PNL +E + QA+ A D S
Sbjct: 139 IGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATFRDGSS 193
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 44.8 bits (101), Expect = 0.002
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 4/199 (2%)
Frame = +2
Query: 50 IQYFELITLQ*-FQVKKC-LSFYITNMSILXY--NGGAVVAMKGQDCVAIATDKRFGIQA 217
I+Y++ + + F +K L+F N + Y NGG V+A+ G +A+D R +
Sbjct: 2 IRYWDFVIKKLNFNIKTYNLNFKSLNRNFDPYQNNGGLVLAITGNKFCVMASDTRISMGY 61
Query: 218 QTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFXMNLYELKENRMMRPKTFSAMLS 397
S ++ ++ +G G+ +D + +L+ + + N + + S
Sbjct: 62 SIPSRLNLRILKISNLCLLGSSGMISDINILHQKLRNEIFRLKYLNNTELNLNGIVYLTS 121
Query: 398 NLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEA 577
+LLY RRF P++ ++ G+ D IG + V G C + +
Sbjct: 122 SLLYSRRFFPFYTFNILTGINELGKASNY-TYDAIGSFDCNHASTV-GNCQSSAQCIMDY 179
Query: 578 LWEPNLKPDELFXTISQAL 634
+ E + D + TI Q +
Sbjct: 180 IEERKIPNDRNYKTILQVV 198
>UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4;
Endopterygota|Rep: Proteasome subunit beta type -
Anopheles gambiae str. PEST
Length = 271
Score = 44.0 bits (99), Expect = 0.003
Identities = 31/124 (25%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G +VV + +D V IA DK + + +V+++ +G+ G D Q + +
Sbjct: 58 GTSVVGLMFKDGVIIAADKLISYGSLARFHDVDRVYRINDKTVLGIGGDFADFQYIKRHI 117
Query: 323 -KFXMNLYELKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLXPYDNQPYVCNM 493
+ ++ L + M+P++F L+ ++Y RR F P +++ VI G+ D +P++ ++
Sbjct: 118 DQKVIDDQCLDDKNEMKPRSFYNWLTRVMYNRRSEFQPLYLDLVIGGM--QDGEPFLGHV 175
Query: 494 DLIG 505
+L G
Sbjct: 176 NLRG 179
>UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precursor;
n=79; Eumetazoa|Rep: Proteasome subunit beta type-9
precursor - Homo sapiens (Human)
Length = 219
Score = 44.0 bits (99), Expect = 0.003
Identities = 36/176 (20%), Positives = 73/176 (41%)
Frame = +2
Query: 137 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFX 316
+ G ++A++ V + +D R V+ F K+ + +Y L G A D Q V
Sbjct: 18 HTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVAD 77
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMD 496
+ + L+ ++ + ++ N+ Y+ R ++AG +D +
Sbjct: 78 MAAYQLELHGIELEEPPLVLAAANVVRNISYKYR-EDLSAHLMVAG---WDQREGGQVYG 133
Query: 497 LIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
+G + F + G+ S +YG +A ++P + P+E + A+ A D S
Sbjct: 134 TLGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSS 189
>UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor;
n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 43.6 bits (98), Expect = 0.004
Identities = 34/174 (19%), Positives = 71/174 (40%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G ++ + V + D R + K+ Q+ +YV G A D+Q V +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
++ ++ + ++ + K + ++ L Y + ++ G Y+ + + L
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLIRMLAYNNK-NMLQTGLIVGGWDKYEGGK-IYGIPLG 129
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G E + F + G+ S LYG + W+ N+ +E + +A+ A D S
Sbjct: 130 GTVVE-QPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGAS 182
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 43.6 bits (98), Expect = 0.004
Identities = 38/162 (23%), Positives = 71/162 (43%)
Frame = +2
Query: 179 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFXMNLYELKEN 358
V +A D R + S + K+ ++ P + + G A D Q L L+EL
Sbjct: 69 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 128
Query: 359 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLIGCPNEPEXFVVS 538
R + S +L+N+LY R + +IAG + P + +D G + + F V
Sbjct: 129 RRISVSGASKLLANMLYSYRGMGLSVGTMIAGWD--ETGPGLYYVDNEGGRLKGDRFSV- 185
Query: 539 GTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
G+ S YG+ ++ ++ ++ +E +++ +A D S
Sbjct: 186 GSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGAS 227
>UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PRE7 - Candida albicans (Yeast)
Length = 127
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFX 316
NGG V+ + G+D +A D R ++ ++ + + K+ +G + + G A D +
Sbjct: 31 NGGTVLGIAGEDFAVLAGDTR-QVEGYSIQSRYESKIHDVGDDILMTANGFAADGVALID 89
Query: 317 RLKFXMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGP 427
R K + Y+ N + + K+ + + LLY +RF P
Sbjct: 90 RFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFP 127
>UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Tetrahymena thermophila SB210
Length = 227
Score = 42.7 bits (96), Expect = 0.008
Identities = 34/174 (19%), Positives = 72/174 (41%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G +++A+ V + D R + KV + +Y G A DTQT+ +
Sbjct: 25 GTSIMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHERIYCLRSGSAADTQTLCSYV 84
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
++ ++++ ++ R KT + + SNL+Y+ + ++AG+ +
Sbjct: 85 RYYLDVHSMELQRRPTVKTAAKLFSNLIYQYQ-DNLSAAVIVAGIDDNEGPSIYACQPSG 143
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
C + + G+ S ++ +A + PN+ + + AL +A D S
Sbjct: 144 SCIK--QQVAIGGSGSGFIFSYVDANFRPNMDLESAKKLVKTALAHAMSRDGSS 195
>UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2;
n=2; Filobasidiella neoformans|Rep: Probable proteasome
subunit beta type-2 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 224
Score = 42.3 bits (95), Expect = 0.010
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +2
Query: 167 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFXMNLYE 346
G+D V +A+D G + ++ K+ +GP L + G DT ++ M LY
Sbjct: 9 GKDYVILASDMGAGRSIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIERNMRLYN 68
Query: 347 LKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLXPYDNQPYVCNMDLIG 505
++ + + P SA + L E R PY + ++ G ++P++ +D +G
Sbjct: 69 IRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLG 123
>UniRef50_P22141 Cluster: Proteasome component C11; n=36;
Ascomycota|Rep: Proteasome component C11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 198
Score = 41.9 bits (94), Expect = 0.013
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 152 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFX 331
++ ++ QD V +A+ K + + K Q+ P + G A DT ++
Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQAN 63
Query: 332 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLXPYDNQPYVCNMDLIG 505
+ LY ++E+ + P+ S+ + L + R PY + +I G N+P + +D +G
Sbjct: 64 IQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLG 123
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 41.9 bits (94), Expect = 0.013
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQ-MGPTLYVGLPGLATDTQTVFXR 319
GG+ A+ G++ +A+D R + T + Q + + + G D +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
L+ ++ Y M + +LS LY RRF PY+ ++AG+ + + V + D
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEH-GKGAVFSYDP 169
Query: 500 IGC 508
IGC
Sbjct: 170 IGC 172
>UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium yoelii yoelii
Length = 287
Score = 41.5 bits (93), Expect = 0.018
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Frame = +2
Query: 137 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFX 316
+ G +A K ++ + +A D R + + S N K+ ++ + + G A D
Sbjct: 57 HKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKYILGTMAGGAADCFYWEK 116
Query: 317 RLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPY-VCNM 493
L + +YEL+ N + + S +LSN+LY+ + +++G YD+ + + +
Sbjct: 117 YLGQIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSG---YDHTGFNMFYI 173
Query: 494 DLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXD 655
D G E F G+ S Y + ++ ++ NL ++ A+ +A D
Sbjct: 174 DDEGKKVEGNLF-SCGSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRD 226
>UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium berghei
Length = 267
Score = 41.5 bits (93), Expect = 0.018
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 140 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
NGG V+ + G + V +A D R + + N PK+ ++ +G G+ +D +T+
Sbjct: 38 NGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSL 97
Query: 320 LKFXMNLYEL 349
L+ + ++ L
Sbjct: 98 LQVLLKIFLL 107
>UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-7;
n=3; Ascomycota|Rep: Probable proteasome subunit alpha
type-7 - Schizosaccharomyces pombe (Fission yeast)
Length = 259
Score = 41.1 bits (92), Expect = 0.023
Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 4/159 (2%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G +A++G +C+ I +++ + Q VS NF K+ + + + GL D + + +
Sbjct: 30 GTTAIALRGNECIVIGVERKNVPKLQNVS-NFQKIAMVDNHVCLAFAGLNADARILIDKA 88
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLXPYDNQPYVCN 490
+ ++L + + + ++ + Y + G P+ + +IAG DN P V
Sbjct: 89 RVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQ 148
Query: 491 MDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDE 607
+ G N + + G S+ E W+ L DE
Sbjct: 149 TEPAGIYNAWKATAI-GRASKAAREYLEKNWKEGLSRDE 186
>UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_66910_67563 - Giardia lamblia
ATCC 50803
Length = 217
Score = 40.7 bits (91), Expect = 0.031
Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 2/174 (1%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
GG VVA+ +D V +A D + + N+ ++ +G +G G D + L
Sbjct: 7 GGTVVAVAHKDGVLMAADTVLNYGSTRRTDNYERIIPVGTHTLIGFTGDEADFKDSLYTL 66
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLXPYDNQPYVCNMD 496
K + L+ Y R P + +I G P ++ PY+ +D
Sbjct: 67 KSMHREARCHGTPPPSTREIHGFLATRNYSSRLEMDPIYNGYIIGGCEPGES-PYIGVVD 125
Query: 497 LIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDA 658
L G F +G + W+P + DE + ++L A DA
Sbjct: 126 LRG-TQFTASFFATGMGRHYALPVLREGWKPGISKDEAVALLLESLKTLAFNDA 178
>UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 284
Score = 40.3 bits (90), Expect = 0.041
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 1/161 (0%)
Frame = +2
Query: 179 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFXMNLYELKEN 358
+ +A D R S + K+ +G + + G A D Q + LYEL+E
Sbjct: 83 IIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREK 142
Query: 359 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQ-PYVCNMDLIGCPNEPEXFVV 535
+ S +N LY R + ++AG YD + P + +D G + + V
Sbjct: 143 TSITVSAASKYFANTLYGYRGQGLSVGSMVAG---YDKKGPQIFKVDSEGDRCQLKVCSV 199
Query: 536 SGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDA 658
G+ S YG+ + ++P + DE +A+++A D+
Sbjct: 200 -GSGSLNAYGILDNHYKPKMTDDEARKLGLRAIMHATYRDS 239
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 40.3 bits (90), Expect = 0.041
Identities = 38/164 (23%), Positives = 66/164 (40%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G +V + DCV + D R + K+ ++ ++ G A D V +
Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAGAGTAADLDHVTSLI 100
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
+ + L +L+ NR R +MLS+ LY+ + G ++AG N +V +
Sbjct: 101 EGNLELQKLQMNRKPRVAHAVSMLSDHLYKYQ-GYIGAHLIVAGSDSTGN--FVFQVSAN 157
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQAL 634
GC + F G+ S + EA + L E +S A+
Sbjct: 158 GCIMQLP-FTSMGSGSLCARSILEARYRDGLTESECVELVSDAI 200
>UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family
protein; n=2; Alveolata|Rep: Proteasome A-type and
B-type family protein - Tetrahymena thermophila SB210
Length = 282
Score = 39.5 bits (88), Expect = 0.071
Identities = 26/90 (28%), Positives = 36/90 (40%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G +V + +D V + D R + K+ + P +Y G A DTQ V RL
Sbjct: 40 GTTIVGLVYKDGVVLGADTRATAGTIVAEKSCSKIHYIAPNMYCCGAGTAADTQWVTDRL 99
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYE 412
+ L L NR R A L LY+
Sbjct: 100 SSELELMRLNTNRQSRIAGAIARLREHLYQ 129
>UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n=1;
Arthrobacter aurescens TC1|Rep: Putative 20S proteasome
beta-subunit - Arthrobacter aurescens (strain TC1)
Length = 324
Score = 38.7 bits (86), Expect = 0.12
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Frame = +2
Query: 152 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFX 331
+VA+ V +A D+R + S + KVF +G+ G A + +
Sbjct: 104 IVALTYAGGVLMAGDRRATMGNIIASRHIEKVFPADEYSVLGIAGTAGLAIDITRLFQVE 163
Query: 332 MNLYELKENRMM----RPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
+ YE E ++ + AM+ L G I P+ AG + + D+
Sbjct: 164 LEHYEKIEGTLLSLVGKANRLGAMIRGNLPMAMQGMAVI-PLFAGFDQVAGVGRLFSYDV 222
Query: 500 IGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDA 658
G E G+ S G + LW+PNL ++ +AL +AAD D+
Sbjct: 223 TGGRYEELEHHSVGSGSVFARGALKKLWKPNLSEEDAISVAVEALYDAADDDS 275
>UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 206
Score = 37.1 bits (82), Expect = 0.38
Identities = 28/127 (22%), Positives = 57/127 (44%)
Frame = +2
Query: 284 GLATDTQTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXP 463
G A DTQ + +++ ++ + + R+ T + + N LYE + ++AG P
Sbjct: 64 GAAADTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYK-DSMSASIIVAGWDP 122
Query: 464 YDNQPYVCNMDLIGCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNA 643
Y P + + L G E + + + G+ S ++G C++ ++ L + A+ +A
Sbjct: 123 YKG-PQIFTLPLGGSVIE-QKWSIGGSGSTFIWGFCDSNYQSMLNQIMSRTFVLHAVAHA 180
Query: 644 ADXDAIS 664
D S
Sbjct: 181 MFRDGSS 187
>UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 235
Score = 36.7 bits (81), Expect = 0.50
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G VV+ + +D + + D R + ++F++G +G+ G +D Q + L
Sbjct: 16 GTTVVSFRYRDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLVKTL 75
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGL 457
+ ++NR + PK + M+ +LY R P + + GL
Sbjct: 76 ----TILTQEDNRRIDPKGYHKMIQRILYSARSKISPLNLSVCVGGL 118
>UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 200
Score = 36.3 bits (80), Expect = 0.66
Identities = 32/155 (20%), Positives = 64/155 (41%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G V + G+D V +A D+R + K+ ++ + + G D Q + RL
Sbjct: 12 GTTTVGLVGKDFVVLAADRRATAGYFIANKQTWKIVEIDSHIAATIAGTVGDAQQLVDRL 71
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
+ Y+ M K+ + + S +L++ R P ++ G D P + ++D +
Sbjct: 72 RVEARYYKTITGDSMPVKSVATLASLILFQYR--PILSVQMLIGGVDSDG-PSLFSVDWL 128
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDE 607
G E + +G+ S + E + +L +E
Sbjct: 129 GTVTR-EKYTATGSGSPYAVSLLEHEYREDLSLEE 162
>UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 229
Score = 35.9 bits (79), Expect = 0.88
Identities = 26/98 (26%), Positives = 39/98 (39%)
Frame = +2
Query: 116 TNMSILXYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLAT 295
T I +G + K + V IA D R S + KV ++ P L + G A
Sbjct: 61 TGPKIRFLHGTTTLGFKFEHGVVIAVDSRATAGPYIASQSVKKVIEINPYLLGTMAGGAA 120
Query: 296 DTQTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLY 409
D L +YEL+ + S +L+N+LY
Sbjct: 121 DCAFWERVLAEQCRIYELRNKERISVAAASKLLANMLY 158
>UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome
subunit beta type 4 precursor (Proteasome beta chain)
(Macropain beta chain) (Multicatalytic endopeptidase
complex beta chain) (Proteasome chain 3); n=1; Apis
mellifera|Rep: PREDICTED: similar to Proteasome subunit
beta type 4 precursor (Proteasome beta chain) (Macropain
beta chain) (Multicatalytic endopeptidase complex beta
chain) (Proteasome chain 3) - Apis mellifera
Length = 256
Score = 35.9 bits (79), Expect = 0.88
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G +VV ++ ++ + IATD + N +V ++ + +G G D Q + +
Sbjct: 49 GTSVVGIQFKNGILIATDILGSYGSLARYRNLERVMKVNDNIILGAGGDYADYQCLKSHI 108
Query: 323 KFXMNLYE-LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGL 457
+ + E L + ++PK L+ +LY RR F P++ +I GL
Sbjct: 109 ERKILEEECLDDGLSLKPKALHCWLTRVLYNRRSQFDPFWNNFIIGGL 156
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 35.9 bits (79), Expect = 0.88
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 320 LKFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDL 499
LK +Y+ + N+ M + +LSN LY +RF PY+ V+ GL + + V D
Sbjct: 3 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE-EGKGCVFTYDA 61
Query: 500 IG 505
+G
Sbjct: 62 VG 63
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 35.9 bits (79), Expect = 0.88
Identities = 39/162 (24%), Positives = 66/162 (40%)
Frame = +2
Query: 170 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFXMNLYEL 349
Q V +A D R + S K+ Q+ L + G A D L LYEL
Sbjct: 88 QGGVILAVDSRASQGSYIASQEVKKIIQINDFLLGTMAGGAADCSYWERVLSKLCRLYEL 147
Query: 350 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLIGCPNEPEXF 529
+ + S M++N+ + R +IAG + P++ +D G + F
Sbjct: 148 RNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFD--KDGPHLYYVDNEGSRVKDCKF 205
Query: 530 VVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXD 655
V G+ S YG+ ++ + +L +E +A+V A + D
Sbjct: 206 SV-GSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRD 246
>UniRef50_Q23FB2 Cluster: Proteasome, putative; n=5;
Oligohymenophorea|Rep: Proteasome, putative -
Tetrahymena thermophila SB210
Length = 297
Score = 35.5 bits (78), Expect = 1.2
Identities = 41/172 (23%), Positives = 65/172 (37%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G +A K Q V +A D R + S K+ ++ L + G A D Q L
Sbjct: 74 GTTTLAFKFQGGVIVAVDSRASQGSFDASETVRKIIEINDQLLGTMAGGAADCQFWEQYL 133
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
Y+L+ + S +L N+LY R + ++ G Q Y + D
Sbjct: 134 AIECRKYQLQNREKVSVAAASRILINILYSYRNHGLSMGCMLTGWDHEGAQLYYLDND-- 191
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDA 658
G + F G+ S YG+ + + NL E +A+ +A DA
Sbjct: 192 GQRIKGNIF-SCGSGSTYAYGVLDNEYHYNLSVKEAAELGRKAIYHATHRDA 242
>UniRef50_A4H5A4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 3728
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 173 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXR 319
+ +++ T + +G ++ VST+ P + GP L V L LATDT + R
Sbjct: 2015 ELLSVTTQQYYGALSRLVSTSLPAIDSGGPLLPVHLSSLATDTLSYILR 2063
>UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Coenzyme Q-binding protein COQ10,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 207
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +2
Query: 341 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLIGCPNEP 520
Y L++ P T A +S + + F PY ++ + P DN+P + + +G
Sbjct: 46 YVLRKAINAPPSTVYAAVSEVAQYKEFIPYCVDSFVDKRNPVDNKPLIAGL-RVGFKQYD 104
Query: 521 EXFVVSGTCSE 553
E F+ + TC +
Sbjct: 105 EEFICNVTCKD 115
>UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 191
Score = 34.7 bits (76), Expect = 2.0
Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 3/171 (1%)
Frame = +2
Query: 161 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFXM-- 334
MK + V ++ D R + V PKV + +Y + G + Q + ++ +
Sbjct: 1 MKYSNGVLLSADTRATMGNLVVDRFIPKVLPITDKIYTCIAGSVSHAQFLVNEVRAHLMT 60
Query: 335 NLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLIGCP 511
+L N M P +A +Y ++ + I G DN + C +IG
Sbjct: 61 QQMDLHANLNGMDPMVATAANIISIYLHKYREFLHAAFILG--GVDNTGFHCINSMIGGS 118
Query: 512 NEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXDAIS 664
E + +SG+ + G+ + L+ P L E + L A D S
Sbjct: 119 VLEEDYAISGSGGVFIKGLMKELYRPELTRTEAINLAHKLLKTAISLDTKS 169
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 34.3 bits (75), Expect = 2.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 365 MRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYV 484
M +AMLS +LY RRF PY+ ++AGL P +
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGELPTI 40
>UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B
precursor; n=28; Eukaryota|Rep: Proteasome subunit beta
type-7-B precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 274
Score = 33.9 bits (74), Expect = 3.5
Identities = 37/171 (21%), Positives = 66/171 (38%)
Frame = +2
Query: 143 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRL 322
G +V + +D V + D R N K+ M P +Y G A DT+ V +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 98
Query: 323 KFXMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
+ L+ + R R T +L L+ + G V+ G+ P++ +
Sbjct: 99 SSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQ-GHVSAALVLGGVD--ITGPHLHTIYPH 155
Query: 503 GCPNEPEXFVVSGTCSEQLYGMCEALWEPNLKPDELFXTISQALVNAADXD 655
G + F G+ S + EA ++ L DE +++A+ + D
Sbjct: 156 G-STDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFND 205
>UniRef50_UPI00006CBD8D Cluster: hypothetical protein
TTHERM_00314880; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00314880 - Tetrahymena
thermophila SB210
Length = 2364
Score = 33.1 bits (72), Expect = 6.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 302 QTVFXRLKFXMNLYELKENRMMRPKTFSAMLSNLLYERRF 421
Q +F KF + ++ L +N ++ KTF ++N+LY + F
Sbjct: 838 QLLFIVFKFVLEVWSLVDNSIITDKTFKEEINNILYYKEF 877
>UniRef50_Q0VN61 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 458
Score = 33.1 bits (72), Expect = 6.2
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3
Query: 264 VGPIWNTFGKLVDTV*ACIPNRLSVAMATQSWPFMATTAPPLYXSIDILVI*KLKHFL 91
VGP+W G+ + +P L + WP +AT PPL+ + + ++ L F+
Sbjct: 56 VGPLWQRLGRYLR-----LPFSLPLLPLLAIWPVLATLLPPLWAMVPVALVAGLPTFV 108
>UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40;
Fungi/Metazoa group|Rep: Proteasome subunit beta type-2
- Homo sapiens (Human)
Length = 201
Score = 32.7 bits (71), Expect = 8.2
Identities = 24/119 (20%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +2
Query: 152 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFXRLKFX 331
++ ++G D V +A+D+ + + K+F+M + + G A DT ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 332 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLXPYDNQPYVCNMDLI 502
+ LY+++ + P + L + R PY + ++AG ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,990,409
Number of Sequences: 1657284
Number of extensions: 13392874
Number of successful extensions: 29754
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 28930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29722
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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