Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_H14
(519 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 132 6e-30
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 120 3e-26
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 115 6e-25
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 114 1e-24
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 109 4e-23
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 73 5e-12
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 68 1e-10
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 63 3e-09
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 57 2e-07
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 51 2e-05
UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102... 48 2e-04
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 46 4e-04
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 40 0.034
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 35 0.97
UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse t... 33 3.9
UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum... 33 5.2
UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;... 32 6.8
UniRef50_Q16MI6 Cluster: Putative uncharacterized protein; n=3; ... 32 6.8
UniRef50_Q121E9 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
UniRef50_Q60KI9 Cluster: Putative uncharacterized protein CBG240... 32 9.0
UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella ve... 32 9.0
UniRef50_Q5B812 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 132 bits (318), Expect = 6e-30
Identities = 62/141 (43%), Positives = 84/141 (59%)
Frame = +1
Query: 37 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 217 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVHQYCQSWILQVARQRQTPQT 396
+H ++N++FCP +NLDKLWTLVSEQTR+ A G P+ +S +V + + P+
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 397 TCHSKSKVLLKISREXNQGCG 459
K+K + + E + G
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVG 141
Score = 34.7 bits (76), Expect = 1.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 329 SPFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 481
+P I++V++ PKQPVIV VGGACVL A
Sbjct: 98 APIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 120 bits (288), Expect = 3e-26
Identities = 55/108 (50%), Positives = 71/108 (65%)
Frame = +1
Query: 136 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 315
NAGG+HHHRIN DKYHPGYFGK+GMRNFH RKN +CP +NLDKLW+LVSE+TR YA
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWSLVSEKTRTTYAEK 79
Query: 316 PDGKVPVHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISREXNQGCG 459
D K PV ++ +V + P+ K+K + + + +G G
Sbjct: 80 KD-KAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGVG 126
Score = 37.1 bits (82), Expect = 0.24
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 326 RSPFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 481
++P I++VKA PKQPVIV VGGAC+L A
Sbjct: 82 KAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGVGGACILVA 133
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 115 bits (277), Expect = 6e-25
Identities = 61/133 (45%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
Frame = +1
Query: 37 MATSKKKTRKLRGHVSXXXXXXXXXXXXX--XXXXNAGGEHHHRINMDKYHPGYFGKLGM 210
M + KKTRKLRGHVS AGG HHHRI M+K+HPGY+GKLGM
Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGM 60
Query: 211 RNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVHQYCQSWILQVARQRQTP 390
R FH +KN CPV+N+DKLW+LVS+ TR KYA KVPV ++ +V + + P
Sbjct: 61 RTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAE-DKKKVPVIDVTKAGFFKVLGKGRLP 119
Query: 391 QTTCHSKSKVLLK 429
K+K K
Sbjct: 120 NQPVVVKAKYFSK 132
Score = 33.1 bits (72), Expect = 3.9
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 332 PFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 481
P I++ KA P QPV+V VGGACVL+A
Sbjct: 100 PVIDVTKAGFFKVLGKGRLPNQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 114 bits (274), Expect = 1e-24
Identities = 62/142 (43%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Frame = +1
Query: 37 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
MAT+ KK RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 217 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVHQYCQSWILQVARQRQTPQT 396
FH +NK FCP++NLDKLW+LV E + K S+ D VP+ Q +V + P+
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAK--SSKD-NVPLIDVTQHGFFKVLGKGHLPEN 117
Query: 397 TCH-SKSKVLLKISREXNQGCG 459
K+K++ K + + + G
Sbjct: 118 KPFVVKAKLISKTAEKKIKEAG 139
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 109 bits (262), Expect = 4e-23
Identities = 57/145 (39%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 43 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFH 222
T K RK RGHVS AGG+HHHRI MDKYHPGYFGK+GMR+FH
Sbjct: 54 TQLHKNRKKRGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMRHFH 113
Query: 223 FRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVHQYCQSWILQVARQRQTPQTTC 402
KN+ CP +N+DKLWTLV + R + A + PV I ++ + Q P
Sbjct: 114 KLKNQTVCPTINIDKLWTLVGTEKREECAK-NTSQAPVIDLTDHGIFKLLGKGQLPNQPV 172
Query: 403 HSKSKVLLKIS-REXNQGCGWCLCT 474
K + + K++ ++ + G C+ T
Sbjct: 173 VVKCRYISKLAEKKIKEVGGACILT 197
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 72.5 bits (170), Expect = 5e-12
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Frame = +1
Query: 37 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
M T +++RK RGHVS N+GG+HHH+I +KYH +FGK GMR
Sbjct: 1 MPTDIRRSRKKRGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRY 60
Query: 217 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVHQYCQSWILQVARQRQTP-Q 393
+ K NF +NLDK+ + + L ++ D + S +L R Q P
Sbjct: 61 YRKLKQNNFNKSINLDKISDKLVKNMHLHTKNSSD-SFDLSLIGMSKVLGRGRMVQKPFV 119
Query: 394 TTCHSKSKVLLKISREXNQGCGWCLCT 474
+S SKV +K + + G+C+ T
Sbjct: 120 IKANSFSKVAVK---KIKKAGGYCILT 143
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 67.7 bits (158), Expect = 1e-10
Identities = 34/100 (34%), Positives = 51/100 (51%)
Frame = +1
Query: 37 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
M KKTRKLRGHVS AGG H + ++HP Y GK GMR
Sbjct: 1 MTDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRV 60
Query: 217 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPV 336
+H ++N ++ ++ +LW ++ ++ R + P+ KVPV
Sbjct: 61 YHRKENSDYARPISSARLWGMIPKEQRYDFLDNPE-KVPV 99
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/105 (32%), Positives = 56/105 (53%)
Frame = +1
Query: 145 GEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDG 324
G ++ + YFGK+GMR+FH +N +F PV+NLDKLWTLV + R K +A
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLVPAEQR-KGLTADST 135
Query: 325 KVPVHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISREXNQGCG 459
+VPV + +V + + P C K++ + ++ + + G
Sbjct: 136 EVPVIDTLAAGYGKVLGKGRLPALPCIVKARWVSSLAEKKIKEAG 180
Score = 52.4 bits (120), Expect = 6e-06
Identities = 25/50 (50%), Positives = 26/50 (52%)
Frame = +1
Query: 37 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 186
M T KTRK RGHVS AGG+HHHR NMDKYHP
Sbjct: 1 MPTHLSKTRKHRGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 57.2 bits (132), Expect = 2e-07
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +1
Query: 172 DKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLV 282
DK+HPG FGK+GMR+FH + K CP++++DKLW++V
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSMV 64
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = +1
Query: 37 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
M T KK+RK+RG S +GG+HHH+I ++Y YF K GMR
Sbjct: 1 MVTKLKKSRKMRGKNSSGHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRI 60
Query: 217 FHFRKNKN 240
++ K N
Sbjct: 61 YNLEKTLN 68
>UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102C;
n=2; Saccharomycetaceae|Rep: Putative uncharacterized
protein YGL102C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 142
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = -1
Query: 306 ILQPRLFRD*CPKLI*VQNWTEILVLSKVEISHTKFAKVSRMVLVHVDXXXXXXXXXXXX 127
+L +F D CP+ + VQ+W + L VE+SHT +++ MV +HV+
Sbjct: 63 VLVSLVFWDQCPQFVQVQDWLPEMSLLLVEVSHTNLTEITWMVFIHVNSVVMLTTGHTST 122
Query: 126 XXXXXVLSDTTMS 88
VL+DTT +
Sbjct: 123 TGVLSVLTDTTFT 135
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 46.4 bits (105), Expect = 4e-04
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +1
Query: 37 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGK--LGM 210
M TS+KKTR LR HVS H R + PG G +GM
Sbjct: 1 MTTSRKKTRNLREHVSVG---------------------HGRFGKHRKLPGSRGNAGVGM 39
Query: 211 RNFHFRKNKNFCPVLNLDKLWTLV 282
R FH +NK +C ++NLDKLW++V
Sbjct: 40 RYFHKLRNKFYCQIVNLDKLWSMV 63
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 39.9 bits (89), Expect = 0.034
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +1
Query: 37 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 189
M+ +KTRK +GHVS NAGGEH HRIN PG
Sbjct: 1 MSGRLRKTRKFQGHVSDSHSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 35.1 bits (77), Expect = 0.97
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 136 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 315
NAG + H +++ K++P YFGK G N+N C + L+ + E+ LKY A
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGF-------NRNPCLIKQLETINIGELEEYILKYKDA 88
Query: 316 ---PDGKVPVH 339
+GKV V+
Sbjct: 89 FQVEEGKVVVN 99
>UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retroelement reverse transcriptase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1044
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 171 GQVPSWILWQTWYEKFPL*KEQEFLSSFEL 260
GQ+P WILW W + L EQ+ +SS +L
Sbjct: 842 GQLPIWILWNLWNCRNKLIFEQKHISSMDL 871
>UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L15 - Cenarchaeum
symbiosum
Length = 138
Score = 32.7 bits (71), Expect = 5.2
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = +1
Query: 37 MATSKKKTRKLRG-HVSXXXXXXXXXXXXXXXXXNAGGE-HHHRINMDKYHPGYFGKLGM 210
MAT +KTRKLRG G+ HH +M K PG+FG
Sbjct: 1 MATRNRKTRKLRGSRTHGWGQVGQHRASGHKGGVGVSGQLKHHFSSMLKEDPGHFGHDST 60
Query: 211 RNFHFRKNKNFCPVLNLDKLWT 276
H K + V +LD T
Sbjct: 61 HPPHSNAAKKWASVRDLDDFHT 82
>UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;
n=7; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 656
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 238 NFCPVLNLDKLWTLVSEQTRLKYASAPDGKV 330
NFCP L D WT++S+ + Y S+PD V
Sbjct: 116 NFCPWLEED--WTMLSDDSTTPYESSPDNSV 144
>UniRef50_Q16MI6 Cluster: Putative uncharacterized protein; n=3;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 1151
Score = 32.3 bits (70), Expect = 6.8
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 334 VH-QYCQSWILQVARQRQTPQTTCHSKSKVLLKISREXNQGC 456
VH +Y Q ++ + +QR T Q H + KVLL SRE N C
Sbjct: 721 VHSRYAQLIVITIEQQRDTAQGVIH-RLKVLLDKSRELNSAC 761
>UniRef50_Q121E9 Cluster: Putative uncharacterized protein; n=1;
Polaromonas sp. JS666|Rep: Putative uncharacterized
protein - Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 321
Score = 31.9 bits (69), Expect = 9.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 244 CPVLNLDKLWTLVSEQTRLKYASAP-DGKVPVHQYCQSWI 360
C + L ++WT V EQ R+K A+ P D +PVH W+
Sbjct: 283 CGEVELARVWTKV-EQIRVKQAAKPKDSPLPVHVAAGGWL 321
>UniRef50_Q60KI9 Cluster: Putative uncharacterized protein CBG24039;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24039 - Caenorhabditis
briggsae
Length = 991
Score = 31.9 bits (69), Expect = 9.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 160 RINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLD-KLWTLVSEQ 291
++ D+Y Y G L + FHF K C + +LD K WT++++Q
Sbjct: 894 KVLADRYKQ-YNGMLKEKKFHFDKLFEICKLTDLDKKQWTILNDQ 937
>UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 306
Score = 31.9 bits (69), Expect = 9.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 244 RNSCSF*SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAYGA 107
R+SC + F +C+S T PC D H +H DL+D GA
Sbjct: 108 RSSCQ--ARCFMNNLCRSYNYNTTPCQLSDSDHLEHPSDLVDKPGA 151
>UniRef50_Q5B812 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1678
Score = 31.9 bits (69), Expect = 9.0
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -1
Query: 441 FSADFEKNFAFTMTGCLGSLPLPSNL*YPALTILMNGDLAIWSRCILQPRLFRD 280
FS D E F F S P+PS+ L + +N L +WS C+ P +FR+
Sbjct: 591 FSRDLEMPFDFVQASFANS-PIPSDFGGNILKLAIN-ILDVWSDCLDGPAIFRE 642
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,021,756
Number of Sequences: 1657284
Number of extensions: 8931381
Number of successful extensions: 20676
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 19960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20661
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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