Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H10
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   0.94 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.8  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 28  HIHTKINLNR*KDNKFNALQLRN 96
           H+   +++N+    KFNAL+L+N
Sbjct: 67  HLEPNLDVNQGNLKKFNALKLKN 89


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 645 KGECHTFXEPSTTDAMSPDSFQNRK 571
           KG C  F  P T +  +P  F+++K
Sbjct: 497 KGTCRIFLAPKTDERGNPWLFRDQK 521


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 649  IKRRMSHIXRTLHN*RHVSR 590
            + +R+ HI +T+    H+SR
Sbjct: 1144 LNKRLDHIEKTIDPSGHISR 1163


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 649  IKRRMSHIXRTLHN*RHVSR 590
            + +R+ HI +T+    H+SR
Sbjct: 1144 LNKRLDHIEKTIDPSGHISR 1163


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 649  IKRRMSHIXRTLHN*RHVSR 590
            + +R+ HI +T+    H+SR
Sbjct: 1144 LNKRLDHIEKTIDPSGHISR 1163


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 649  IKRRMSHIXRTLHN*RHVSR 590
            + +R+ HI +T+    H+SR
Sbjct: 1144 LNKRLDHIEKTIDPSGHISR 1163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,188
Number of Sequences: 336
Number of extensions: 2651
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)