Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H10
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   3.6  
DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    23   8.4  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    23   8.4  
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        23   8.4  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 480 NMTAAQLDAQEHXYFKNYIDKLQASEHWKDISYFEMNLE 596
           N T  QL A E    +  + +  A E+W  ++YFE++ +
Sbjct: 500 NATGGQL-AGELPGQQRLLSRQPAPEYWCSVAYFELDTQ 537


>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 212 EQGFTYAYIDRNKCIR 259
           E+G+   Y+D  KC+R
Sbjct: 63  EKGYVREYLDGGKCVR 78


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 396 VPXKEMEINSLDYFPVDLSFPRRPPWDFNMTAAQLDAQEHXYFKNYIDKLQA-SEHWKDI 572
           +P  +  I+ ++    D   P R P + + TA   +  E     N  DK++A       +
Sbjct: 238 IPLLKDNIDYVNVAAYDQQTPERNPKEGDYTAPIYEPTERVVGNNVDDKVKAWHSQGTPL 297

Query: 573 SYFEMNLETWRQLWRVL 623
               + + T+ + WR++
Sbjct: 298 DKIVVGIATYGRGWRLV 314


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 150 AWGMTSKLLDSKARNLFLI 94
           AWG+  K LD   RN+ L+
Sbjct: 17  AWGLIRKDLDVHGRNVLLL 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,427
Number of Sequences: 2352
Number of extensions: 11517
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)