Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H08
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.18 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 141 KAGGMRITQHKTPHSKDSKEPANEDLTGLS-GPSPVPSNPISIAGAP 278
           K  G   T   TP+S  S  P  E+    + G  P PS+P SI+  P
Sbjct: 27  KLEGDEDTGSMTPNSAASPAPPEEEAASPTPGDVPTPSSPRSISEDP 73


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 327 SPKPPAHINLRPSPNIQQPRK 389
           SP PP  I+ +P+P+ Q P +
Sbjct: 329 SPPPPYQISAQPTPS-QSPNQ 348


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -1

Query: 84  SFDNFEFNLFTIVGSLS--NANATSTKFVS 1
           S  + +FN+F  VGSL   + N +  K ++
Sbjct: 175 SISSLDFNIFDQVGSLGMFHVNMSHNKLIN 204


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 231 GPSPVPSNPISIAGA 275
           GP PVPS P    G+
Sbjct: 204 GPEPVPSTPYPPPGS 218


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 300 TPEAAQVAHSPKPPAHINLRPSPNIQQP 383
           +PE +QVA S   P+   L P    + P
Sbjct: 178 SPEMSQVAASWHTPSMYPLSPGAGFRSP 205


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 300 TPEAAQVAHSPKPPAHINLRPSPNIQQP 383
           +PE +QVA S   P+   L P    + P
Sbjct: 70  SPEMSQVAASWHTPSMYPLSPGAGFRSP 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,587
Number of Sequences: 336
Number of extensions: 2883
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)