Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H07
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   1.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.9  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   7.9  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +3

Query: 234 GRGFSLADKLESQRFEHTDAVLEMQGTDLTVTYLQKNGFTTPLLFKEKTGLGLRVPTSNF 413
           GR   + +K  +  F   +A   M  +DL V  L + G + P   K+  G G  + +S F
Sbjct: 512 GRTGRVGNKGRATSFYDPEADRAM-ASDL-VKILTQAGQSVPDFLKDAGGSGSYMGSSQF 569

Query: 414 TVNDVRMCVGSR 449
              D+R   GSR
Sbjct: 570 GGKDIRDSYGSR 581


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 93  NQIYTILRKYFSSEQREKVTQIHHLXIHDTS 1
           N++  + R   S+ QR+K   I    IHDT+
Sbjct: 376 NRLRMMNRDSSSASQRDKDQDIDDFNIHDTT 406


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 93  NQIYTILRKYFSSEQREKVTQIHHLXIHDTS 1
           N++  + R   S+ QR+K   I    IHDT+
Sbjct: 377 NRLRMMNRDSSSASQRDKDQDIDDFNIHDTT 407


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,395
Number of Sequences: 2352
Number of extensions: 11340
Number of successful extensions: 76
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)