Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_H07
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical pr... 75 3e-14
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 75 3e-14
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.67
AF098993-5|AAC67468.1| 325|Caenorhabditis elegans Hypothetical ... 29 3.6
AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated... 29 3.6
Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical p... 28 4.8
Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z82274-7|CAD21646.1| 331|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical pr... 27 8.3
>U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical
protein T26A5.5b protein.
Length = 505
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/104 (34%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +3
Query: 318 LTVTYLQKNGFTTPLLFK-EKTGLGLRVPTSNFTVNDVRMCVGSRRILDVMDVNTXKNIX 494
L + + KNG P+ F+ + +G+ +P+ +F+V+DV VG R+++V+ V ++
Sbjct: 6 LNLEFYDKNGLDNPIHFRCDPKRIGMTLPSPDFSVDDVLELVGGNRMIEVVQVQNQGSVK 65
Query: 495 MTMXDWQRYYDDPNKER--LLNVISLEFSHTRLENYVQAPRIVR 620
M++ ++ +Y P ++R L NV+SLEFS T LE+ V++P +VR
Sbjct: 66 MSLQEFINFYKTPQEKREVLYNVLSLEFSQTPLEDLVKSPELVR 109
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/104 (34%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +3
Query: 318 LTVTYLQKNGFTTPLLFK-EKTGLGLRVPTSNFTVNDVRMCVGSRRILDVMDVNTXKNIX 494
L + + KNG P+ F+ + +G+ +P+ +F+V+DV VG R+++V+ V ++
Sbjct: 6 LNLEFYDKNGLDNPIHFRCDPKRIGMTLPSPDFSVDDVLELVGGNRMIEVVQVQNQGSVK 65
Query: 495 MTMXDWQRYYDDPNKER--LLNVISLEFSHTRLENYVQAPRIVR 620
M++ ++ +Y P ++R L NV+SLEFS T LE+ V++P +VR
Sbjct: 66 MSLQEFINFYKTPQEKREVLYNVLSLEFSQTPLEDLVKSPELVR 109
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 0.67
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 283 TPTQSWRCKAPISLSHTCRRMVLQLPCCSKRKLVL 387
+P + CKA + +S C R+ PCC K++L
Sbjct: 747 SPCEPSPCKASVRISCECGRIKKDAPCCEVDKMIL 781
>AF098993-5|AAC67468.1| 325|Caenorhabditis elegans Hypothetical
protein T10B11.6 protein.
Length = 325
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 278 RAHRRSPGDARHRSHCHILAEEWFYNSLAVQRENWSWIESTDE*FHRER 424
RA PGD R + C I+ + N + W W E+ ++ RER
Sbjct: 124 RAIDAKPGDFRSFAKCPIIVHSFSMNGVRGLISFWKWTEAEEKPQLRER 172
>AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated
protein 57, isoform c protein.
Length = 379
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 247 HSPISWRVKDSSTPTQSWRCKAPISLSH 330
H P+S +S TP S+R AP +SH
Sbjct: 253 HVPLSVLANESRTPRSSFRSPAPSDMSH 280
>Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical
protein T16H12.5b protein.
Length = 409
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 293 SPGDARHRSHCHILAEEWFYNSLAVQRENWSWIESTDE*FHRERCAHVRRFAPYSRRNGC 472
SP A H +AE W + + V + N+ W + F RE V + + +S GC
Sbjct: 27 SPSSASHGDPLLPVAENWCHTQVKVVKFNYMWTINNFS-FCREEMGEVLKSSTFSA--GC 83
Query: 473 QHTXKY 490
K+
Sbjct: 84 NDKLKW 89
>Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical
protein T16H12.5a protein.
Length = 451
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 293 SPGDARHRSHCHILAEEWFYNSLAVQRENWSWIESTDE*FHRERCAHVRRFAPYSRRNGC 472
SP A H +AE W + + V + N+ W + F RE V + + +S GC
Sbjct: 69 SPSSASHGDPLLPVAENWCHTQVKVVKFNYMWTINNFS-FCREEMGEVLKSSTFSA--GC 125
Query: 473 QHTXKY 490
K+
Sbjct: 126 NDKLKW 131
>Z82274-7|CAD21646.1| 331|Caenorhabditis elegans Hypothetical
protein JC8.13 protein.
Length = 331
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = -2
Query: 446 RTDAHAHIVHGEITRRYSQSKTSFLFEQQGSCKTILLQVCDSEIGALHLQDCVG 285
R D + G+ T + F E G+CK Q D ++ L++C G
Sbjct: 113 RQDMIMQNLRGDFTVILIEKMLPFYIETDGACKMAKCQSYDPKLHDFQLEECFG 166
>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
protein C31E10.8 protein.
Length = 1272
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -2
Query: 221 IIAERPLVGVKLPVLAFTQLSWYLFFIIRQCFRHVYISQKHCTTKFTLFYVNILARSSEK 42
II+ +G+ A T+L++ I+ FR + + L YVN+LA EK
Sbjct: 593 IISRGDAIGIMRVSKAATKLAFDEEAIVNMAFRIPNLPTRIELKNMQLQYVNLLAERLEK 652
Query: 41 K*RKS 27
K R++
Sbjct: 653 KMRRA 657
>Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical
protein W04D2.2a protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/78 (21%), Positives = 33/78 (42%)
Frame = -2
Query: 341 LLQVCDSEIGALHLQDCVGVLESLTLQLIGE*KPPAALRLIIAERPLVGVKLPVLAFTQL 162
++ + + AL C+ L + +L+G KP A++L + + + P+L F
Sbjct: 102 IIYISGMVVCALWCSSCMTALLLVANRLLGMTKPSLAVKLFEGRKTYIALTFPILYFI-- 159
Query: 161 SWYLFFIIRQCFRHVYIS 108
Y F F Y++
Sbjct: 160 --YFLFTAPLVFNSKYLA 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,419,940
Number of Sequences: 27780
Number of extensions: 260431
Number of successful extensions: 873
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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