Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_H05
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0235 + 6644083-6644125,6645218-6645315,6645448-6645498,664... 194 4e-50
07_01_0718 + 5484553-5484601,5484836-5484933,5485028-5485078,548... 173 8e-44
01_01_0676 + 5194718-5194940,5195420-5195952 32 0.46
04_03_0093 - 11085882-11087339 31 1.1
01_06_1795 - 39925019-39926029,39926265-39926408,39927200-399272... 31 1.1
04_03_0647 + 18367321-18367675,18368044-18368885 29 2.4
11_03_0064 + 9518810-9519164,9519533-9520359 29 3.2
08_02_1451 - 27192418-27192423,27192424-27193146 29 3.2
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 29 3.2
05_04_0184 - 18855062-18855604,18855889-18856611 29 4.3
09_02_0334 - 7374974-7375032,7375370-7375586 28 5.6
10_07_0179 - 13860745-13861571,13861940-13862294 27 9.9
01_01_0100 - 755894-756662,757086-757598,758718-761050 27 9.9
>03_02_0235 +
6644083-6644125,6645218-6645315,6645448-6645498,
6645573-6645686,6645771-6645971,6646047-6646148,
6647245-6647352,6647745-6647995,6648108-6648279,
6648341-6648397,6648555-6648710,6648807-6648857,
6649053-6649193,6649270-6649464,6649534-6649665,
6649768-6649941,6650396-6650635,6650761-6650955
Length = 826
Score = 194 bits (474), Expect = 4e-50
Identities = 95/178 (53%), Positives = 120/178 (67%)
Frame = +1
Query: 112 DEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDA 291
D++D +P+ ++K VLQE R F+ + RKCS ++TK+LYLLNQGE FT EAT+
Sbjct: 11 DDEDVEYSPFYGIEKGAVLQEARAFHDPQLDARKCSQVITKLLYLLNQGETFTKVEATEV 70
Query: 292 FFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALC 471
FFA TKLFQSK+ LRR+VYL IKELS + +VIIVTSSL KDM K D+YRA AIR LC
Sbjct: 71 FFAVTKLFQSKDAGLRRLVYLMIKELSPSSDEVIIVTSSLMKDMNSKTDMYRANAIRVLC 130
Query: 472 SITDASMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWANEAXETINS 645
I D ++L IERY+KQAIVDKNP P++V+RW+NE E + S
Sbjct: 131 RIIDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQANPEIVKRWSNEVQEAVQS 188
>07_01_0718 +
5484553-5484601,5484836-5484933,5485028-5485078,
5485744-5485857,5485887-5485937,5485938-5486138,
5486240-5486341,5486879-5486986,5487053-5487286,
5488250-5488500,5488592-5488763,5489165-5489320,
5489405-5489455,5489499-5489591,5489814-5490014,
5490105-5490236,5490308-5490481,5490755-5490994,
5491213-5491407
Length = 890
Score = 173 bits (422), Expect = 8e-44
Identities = 97/198 (48%), Positives = 122/198 (61%), Gaps = 17/198 (8%)
Frame = +1
Query: 103 DVKDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEA 282
D DE++ S P+ ++K VLQE R F+ + R+C ++TK+LYLLNQG+ FT EA
Sbjct: 11 DDLDEEEYYS-PFLGIEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEA 69
Query: 283 TDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQD-----------------VIIVTSSL 411
T+ FFATTKLFQSK+ LRRMVYL IKELS A + VIIVTSSL
Sbjct: 70 TEVFFATTKLFQSKDAGLRRMVYLMIKELSPSADEFSAVYGSLKVSVLHLLQVIIVTSSL 129
Query: 412 TKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXX 591
KDM K D+YRA AIR LC I D+++L IERY+KQAIVDKNP
Sbjct: 130 MKDMNSKTDMYRANAIRVLCRIIDSTLLTQIERYLKQAIVDKNPVVASAALVSGIYLLQT 189
Query: 592 XPDLVRRWANEAXETINS 645
P++V+RW+NE E + S
Sbjct: 190 SPEVVKRWSNEVQEAVQS 207
>01_01_0676 + 5194718-5194940,5195420-5195952
Length = 251
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 441 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 265
+I F GH + H +HI ++F QF DA + F G+ + + L+G
Sbjct: 7 KISFLGHEIGEGKIHLQEHIAKKFLQFPDAMNDKKELQQFLGIVNYARNHIQNLAKLAGP 66
Query: 264 IFALIQ 247
++A+++
Sbjct: 67 LYAILR 72
>04_03_0093 - 11085882-11087339
Length = 485
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Frame = -1
Query: 605 TRSGAVEDK*SAETNAAELTAGFLSTIACFIYRS--------IACSIEASVMLHNALIAA 450
T AV+ S N A+LT ++A + S I C A V+LH +
Sbjct: 187 TTDEAVQQLVSGCPNLADLTLEQCPSVADLVVASPRLESFAMICCHNAAHVVLHTQRLRT 246
Query: 449 ARYRSSLPVMSLVKEEVTMITSCANLLS 366
RY+ LP E MI C N+L+
Sbjct: 247 LRYKDGLP----AGENFLMIADCTNVLA 270
>01_06_1795 -
39925019-39926029,39926265-39926408,39927200-39927277,
39927722-39927838,39927925-39927981,39928492-39928623,
39928725-39928922,39929364-39929474,39929570-39929785,
39929879-39930064,39930590-39931192
Length = 950
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 208 RKCSLILTKILYLLNQGENFTTQEATDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQD 387
RK +L +++Y G +A+ K+ + + L+R YL + D
Sbjct: 64 RKMKELLLRLVYAEMLGH-----DASFGHIHAVKMTHDESLPLKRTGYLAVSLFLDERHD 118
Query: 388 -VIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAI 504
VI+V +++ KD+ L AA+ A C + + A+
Sbjct: 119 LVILVVNTIQKDLRSDNYLVVCAALTAACRLIGEEAIPAV 158
>04_03_0647 + 18367321-18367675,18368044-18368885
Length = 398
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 441 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 265
+I F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 7 KINFLGHKIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 66
Query: 264 IFALIQ*IQYFRKY**TFSRDNERLIKL 181
++A ++ + +KY F+ ++ +L++L
Sbjct: 67 LYAKLR--KNGQKY---FNSEDIKLVRL 89
>11_03_0064 + 9518810-9519164,9519533-9520359
Length = 393
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 441 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 265
++ F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 7 KVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 66
Query: 264 IFALIQ*IQYFRKY**TFSRDNERLIKL 181
++A ++ + +KY F+ ++ +L++L
Sbjct: 67 LYAKLR--KNGQKY---FNSEDIKLVRL 89
>08_02_1451 - 27192418-27192423,27192424-27193146
Length = 242
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 441 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 265
++ F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 7 KVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 66
Query: 264 IFALIQ*IQYFRKY**TFSRDNERLIKL 181
++A ++ + +KY F+ ++ +L++L
Sbjct: 67 LYAKLR--KNGQKY---FNSEDIKLVRL 89
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 441 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 265
++ F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 547 KVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 606
Query: 264 IFALIQ*IQYFRKY**TFSRDNERLIKL 181
++A ++ + +KY F+ ++ +L++L
Sbjct: 607 LYAKLR--KNGQKY---FNSEDIKLVRL 629
>05_04_0184 - 18855062-18855604,18855889-18856611
Length = 421
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 441 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 265
+I F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 7 KINFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 66
Query: 264 IFALIQ 247
++A ++
Sbjct: 67 LYAKLR 72
>09_02_0334 - 7374974-7375032,7375370-7375586
Length = 91
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 519 TGDCGQEPGRQFCGISLCA 575
TGDCGQE R++ + LCA
Sbjct: 8 TGDCGQEAMRRWIRLPLCA 26
>10_07_0179 - 13860745-13861571,13861940-13862294
Length = 393
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = -3
Query: 441 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 265
++ F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 7 KVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 66
Query: 264 IFALIQ*IQYFRKY**TFSRDNERLIKL 181
++ ++ + +KY F+ ++ +L++L
Sbjct: 67 LYTKLR--KNGQKY---FNSEDIKLVRL 89
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 441 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 265
+I F GH + H +HI ++ +F DA + F GL + + + L+G
Sbjct: 969 KINFLGHEIGEGKIHLQEHIAKKILEFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 1028
Query: 264 IFALIQ 247
++A ++
Sbjct: 1029 LYAKLR 1034
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,055,961
Number of Sequences: 37544
Number of extensions: 270579
Number of successful extensions: 616
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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