Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_H05
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical pr... 218 2e-57
Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical pr... 218 2e-57
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 33 0.13
AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical ... 29 2.9
AC006810-5|AAF59629.2| 516|Caenorhabditis elegans Cytochrome p4... 29 3.8
Z92796-4|CAB63231.1| 516|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z46241-5|CAA86321.1| 279|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF125962-1|AAD14741.1| 341|Caenorhabditis elegans Seven tm rece... 27 8.8
>Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical
protein T14G10.5b protein.
Length = 883
Score = 218 bits (533), Expect = 2e-57
Identities = 104/181 (57%), Positives = 131/181 (72%)
Frame = +1
Query: 109 KDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATD 288
K +++ N Y +LDKT VLQE R FN+T + RKC IL+K++Y++ QGE+ EAT+
Sbjct: 18 KKDEETGGNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRTEATE 77
Query: 289 AFFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRAL 468
AFF TKL+QSK++ LRRMVYL +KEL++++ DVIIVTSSLTKDMTG+EDLYRAAAIRAL
Sbjct: 78 AFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAAIRAL 137
Query: 469 CSITDASMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWANEAXETINSD 648
C ITD MLQ IERYMKQAIVD+N ++VRRWANE E ++SD
Sbjct: 138 CKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANEVQEAVSSD 197
Query: 649 N 651
N
Sbjct: 198 N 198
>Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical
protein T14G10.5a protein.
Length = 870
Score = 218 bits (533), Expect = 2e-57
Identities = 104/181 (57%), Positives = 131/181 (72%)
Frame = +1
Query: 109 KDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATD 288
K +++ N Y +LDKT VLQE R FN+T + RKC IL+K++Y++ QGE+ EAT+
Sbjct: 5 KKDEETGGNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRTEATE 64
Query: 289 AFFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRAL 468
AFF TKL+QSK++ LRRMVYL +KEL++++ DVIIVTSSLTKDMTG+EDLYRAAAIRAL
Sbjct: 65 AFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAAIRAL 124
Query: 469 CSITDASMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWANEAXETINSD 648
C ITD MLQ IERYMKQAIVD+N ++VRRWANE E ++SD
Sbjct: 125 CKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANEVQEAVSSD 184
Query: 649 N 651
N
Sbjct: 185 N 185
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/99 (22%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = +1
Query: 226 LTKILYLLNQGENFTTQEATDAFFATTKLFQSKEIMLRRMVYL---CIKELS---KLAQD 387
L K++Y++ GE T+Q + S E L++++ + C+ + KL +
Sbjct: 42 LKKLIYMILNGEK-TSQSML--MYVIRFCLPSNEHTLKKVLLIFWECVPKTDSNGKLLHE 98
Query: 388 VIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAI 504
+I+V + KD+ + R + +R LC + + +L+ +
Sbjct: 99 MILVCDAYRKDLQHPNEFVRGSTLRFLCKLREPELLEPL 137
>AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical
protein F59B1.8 protein.
Length = 420
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -3
Query: 468 QRSYCGRP----VQILFTGHVFSQRGSHYDHILRQFTQFFDAKI 349
Q S+ G P V++L + + R SH++HIL QF +F +I
Sbjct: 298 QESHMGNPAEDLVRLLVSTISGADRQSHWEHILEQFYTYFTDEI 341
>AC006810-5|AAF59629.2| 516|Caenorhabditis elegans Cytochrome p450
family protein 32B1 protein.
Length = 516
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +1
Query: 334 LRRMVYL--CIKELSKLAQDVIIVTSSLTKDM----TGKEDLYRAAAIRALCSI 477
+++MVYL CIKE ++ V V+ LT+D+ K DL A I + +I
Sbjct: 363 IQKMVYLEQCIKETLRMTPPVPFVSRKLTEDVKIPHATKPDLLLPAGINCMINI 416
>Z92796-4|CAB63231.1| 516|Caenorhabditis elegans Hypothetical
protein H25K10.5 protein.
Length = 516
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 231 ENTVFTESRRKFHHSGGYGRFLCDNKTVSVQRNHAAT 341
EN+ FT S + G Y RFLCD + + NH T
Sbjct: 113 ENSSFT-SLGFLSYKGLYFRFLCDRHGMVIANNHLLT 148
>Z46241-5|CAA86321.1| 279|Caenorhabditis elegans Hypothetical
protein C38D4.7 protein.
Length = 279
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 483 VRDAAQRSYCGRPVQI--LFTGHVFSQRGSHYDHILRQFTQFFDAKINHTSQ 334
+RD R++ GR + +F G V +GS YD L +F F N SQ
Sbjct: 199 IRDEENRNH-GRSAERDNVFIGAVLVGKGSQYDKDLEKFKSFRCRTCNEVSQ 249
>AF125962-1|AAD14741.1| 341|Caenorhabditis elegans Seven tm
receptor protein 113 protein.
Length = 341
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 219 INTYENTVFTESRRKFHHSGGYGR 290
I+ Y+NT+F R++F +S G R
Sbjct: 68 IHIYDNTIFVIQRKRFQYSEGTAR 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,260,543
Number of Sequences: 27780
Number of extensions: 245994
Number of successful extensions: 644
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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