Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H04
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X02200-1|CAA26131.1|  182|Drosophila melanogaster protein ( Dros...    31   1.3  
AY089367-1|AAL90105.1|  162|Drosophila melanogaster AT18988p pro...    29   5.3  
AE014134-2687|AAF53512.2|  162|Drosophila melanogaster CG17329-P...    29   5.3  
M24441-1|AAA28652.1|  975|Drosophila melanogaster protein ( D.me...    28   9.2  
AY094959-1|AAM11312.1|  975|Drosophila melanogaster SD02406p pro...    28   9.2  
AE013599-2234|AAF58029.1|  975|Drosophila melanogaster CG7765-PA...    28   9.2  

>X02200-1|CAA26131.1|  182|Drosophila melanogaster protein (
           Drosophila Dras3 gene. ).
          Length = 182

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = +3

Query: 348 YFALLDNNVSLKKTVNEQRETIKILNTKVQRLSTARKNIYGKEQNDCCRSVK 503
           Y   ++++   +  VNE++  ++I+NT      TA +N+Y K  +D C S +
Sbjct: 32  YDPTIEDSYRKQVKVNERQCMLEIVNTAGTEQFTAMRNLYMKNGSDSCWSTR 83


>AY089367-1|AAL90105.1|  162|Drosophila melanogaster AT18988p
           protein.
          Length = 162

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +3

Query: 288 ERELYRTC-----PTKLSKRELEDLYFALLDNNVSLKKTVNEQRETIKILNTKVQRLSTA 452
           E+EL RT      PT+ S   LE+    L D+N+ +K    ++R  +++L  K+ + +T 
Sbjct: 5   EKELERTEQQQQEPTEPSNGNLEEQVRKLRDHNLRVKHLNTQRRRILRLLQGKMLQYATL 64

Query: 453 RKNIY 467
            + ++
Sbjct: 65  EERLH 69


>AE014134-2687|AAF53512.2|  162|Drosophila melanogaster CG17329-PA
           protein.
          Length = 162

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +3

Query: 288 ERELYRTC-----PTKLSKRELEDLYFALLDNNVSLKKTVNEQRETIKILNTKVQRLSTA 452
           E+EL RT      PT+ S   LE+    L D+N+ +K    ++R  +++L  K+ + +T 
Sbjct: 5   EKELERTEQQQQEPTEPSNGNLEEQVRKLRDHNLRVKHLNTQRRRILRLLQGKMLQYATL 64

Query: 453 RKNIY 467
            + ++
Sbjct: 65  EERLH 69


>M24441-1|AAA28652.1|  975|Drosophila melanogaster protein (
           D.melanogaster kinesinheavy chain mRNA, complete cds. ).
          Length = 975

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 23/84 (27%), Positives = 33/84 (39%)
 Frame = +3

Query: 369 NVSLKKTVNEQRETIKILNTKVQRLSTARKNIYGKEQNDCCRSVKVMVNEXXELIVELKR 548
           N+S    VNEQ           Q+L    + I   +Q+     +K  V E  ELI   +R
Sbjct: 424 NMSASVAVNEQARLATECERLYQQLDDKDEEI--NQQSQYAEQLKEQVMEQEELIANARR 481

Query: 549 ENTRLCERVRLLNMRLCSAKQFTK 620
           E   L   +  +     SAK+  K
Sbjct: 482 EYETLQSEMARIQQENESAKEEVK 505


>AY094959-1|AAM11312.1|  975|Drosophila melanogaster SD02406p
           protein.
          Length = 975

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 23/84 (27%), Positives = 33/84 (39%)
 Frame = +3

Query: 369 NVSLKKTVNEQRETIKILNTKVQRLSTARKNIYGKEQNDCCRSVKVMVNEXXELIVELKR 548
           N+S    VNEQ           Q+L    + I   +Q+     +K  V E  ELI   +R
Sbjct: 424 NMSASVAVNEQARLATECERLYQQLDDKDEEI--NQQSQYAEQLKEQVMEQEELIANARR 481

Query: 549 ENTRLCERVRLLNMRLCSAKQFTK 620
           E   L   +  +     SAK+  K
Sbjct: 482 EYETLQSEMARIQQENESAKEEVK 505


>AE013599-2234|AAF58029.1|  975|Drosophila melanogaster CG7765-PA
           protein.
          Length = 975

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 23/84 (27%), Positives = 33/84 (39%)
 Frame = +3

Query: 369 NVSLKKTVNEQRETIKILNTKVQRLSTARKNIYGKEQNDCCRSVKVMVNEXXELIVELKR 548
           N+S    VNEQ           Q+L    + I   +Q+     +K  V E  ELI   +R
Sbjct: 424 NMSASVAVNEQARLATECERLYQQLDDKDEEI--NQQSQYAEQLKEQVMEQEELIANARR 481

Query: 549 ENTRLCERVRLLNMRLCSAKQFTK 620
           E   L   +  +     SAK+  K
Sbjct: 482 EYETLQSEMARIQQENESAKEEVK 505


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,963,577
Number of Sequences: 53049
Number of extensions: 458196
Number of successful extensions: 1234
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)