Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H03
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    31   0.024
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   3.6  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 31.5 bits (68), Expect = 0.024
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +3

Query: 495 YMDIPDAVVGKFILISTATLFILTTLWINTYPFLDEDSAVYELIPNPKW 641
           Y+D   ++    +++ +A + ++ TLW+ TYP  D +         P W
Sbjct: 258 YLDSVGSIEDLQLIVYSAAVAVVRTLWLRTYPQGDSEGRPCSKAEKPAW 306


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 274 ILVNFIIISCVVRFFTSTFVWMRNCLTC 191
           +L+ F+ +S +    T   +WM+NC +C
Sbjct: 323 LLILFLCVSILGTLITPE-LWMKNCKSC 349


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,807
Number of Sequences: 2352
Number of extensions: 11111
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)