Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H03
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003623-1|AAO39626.1| 1104|Drosophila melanogaster GH02446p pro...    32   0.78 
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    32   0.78 
AY061461-1|AAL29009.1| 1430|Drosophila melanogaster LD41803p pro...    28   9.6  
AE014297-3525|AAF56280.2| 1430|Drosophila melanogaster CG5728-PA...    28   9.6  

>BT003623-1|AAO39626.1| 1104|Drosophila melanogaster GH02446p protein.
          Length = 1104

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = +2

Query: 266  DQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFE 445
            + N+ K+  + EPA  P  + K   +AKK+KPL +    K    K  + P E++S +D  
Sbjct: 846  ESNLGKVPTVKEPAKLPEPLIKT--KAKKEKPLKKEKGAKLLTPKDEVLPIERESAKDET 903

Query: 446  K 448
            K
Sbjct: 904  K 904


>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = +2

Query: 266  DQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFE 445
            + N+ K+  + EPA  P  + K   +AKK+KPL +    K    K  + P E++S +D  
Sbjct: 5088 ESNLGKVPTVKEPAKLPEPLIKT--KAKKEKPLKKEKGAKLLTPKDEVLPIERESAKDET 5145

Query: 446  K 448
            K
Sbjct: 5146 K 5146


>AY061461-1|AAL29009.1| 1430|Drosophila melanogaster LD41803p protein.
          Length = 1430

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 320  IVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFEKE 451
            +VEKI    KK +PL      +K K+   LF E+K   ++ + E
Sbjct: 1038 VVEKITNGQKKTQPLTNGIVKEKPKQNGKLFFEDKTPAKNAKSE 1081


>AE014297-3525|AAF56280.2| 1430|Drosophila melanogaster CG5728-PA
            protein.
          Length = 1430

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 320  IVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFEKE 451
            +VEKI    KK +PL      +K K+   LF E+K   ++ + E
Sbjct: 1038 VVEKITNGQKKTQPLTNGIVKEKPKQNGKLFFEDKTPAKNAKSE 1081


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,976,953
Number of Sequences: 53049
Number of extensions: 461535
Number of successful extensions: 1096
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)