Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_H03
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 29 2.2
U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z70284-10|CAB54279.1| 351|Caenorhabditis elegans Hypothetical p... 28 6.6
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 27 8.7
AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine r... 27 8.7
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 326 EKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFEKE 451
EK + KKQK LL+ E + KEK EK+ ++ E+E
Sbjct: 194 EKRREEKKKQKELLKEKERSERKEKERELEREKEKSREKERE 235
>U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical
protein F07C3.3 protein.
Length = 791
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 396 KNPSFSLKKNNHF--KTLKKNCFVXELHNYIKKYMYMDIP 509
+ P ++ KN+ F KTL+ N FV +N+ KK + ++P
Sbjct: 222 RKPERNMTKNSMFIKKTLEVNAFVINCYNHSKKAVKPEVP 261
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical
protein F26H11.2c protein.
Length = 2266
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 206 PHPYKSRSEKXXXXXXDNKVDQNIKKLLVLSEPAAD--PNIVEKIIQRAKKQKPLLENTE 379
P P K R+ + +V+ I+++ V S PA+ P K R KK
Sbjct: 108 PPPTKKRAAQRETPSDAEEVEVKIEEISVRSTPASTPAPKSTSKARGRPKKNPTPPRRKS 167
Query: 380 VKKGKEKSILFPEEKQSFQDFEKELF 457
+K+ +E I E+ + ++ + F
Sbjct: 168 LKRQEEDIIYMDEDSEEEEESSDDEF 193
>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical
protein F26H11.2b protein.
Length = 1693
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 206 PHPYKSRSEKXXXXXXDNKVDQNIKKLLVLSEPAAD--PNIVEKIIQRAKKQKPLLENTE 379
P P K R+ + +V+ I+++ V S PA+ P K R KK
Sbjct: 108 PPPTKKRAAQRETPSDAEEVEVKIEEISVRSTPASTPAPKSTSKARGRPKKNPTPPRRKS 167
Query: 380 VKKGKEKSILFPEEKQSFQDFEKELF 457
+K+ +E I E+ + ++ + F
Sbjct: 168 LKRQEEDIIYMDEDSEEEEESSDDEF 193
>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical
protein F26H11.2a protein.
Length = 1691
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 206 PHPYKSRSEKXXXXXXDNKVDQNIKKLLVLSEPAAD--PNIVEKIIQRAKKQKPLLENTE 379
P P K R+ + +V+ I+++ V S PA+ P K R KK
Sbjct: 108 PPPTKKRAAQRETPSDAEEVEVKIEEISVRSTPASTPAPKSTSKARGRPKKNPTPPRRKS 167
Query: 380 VKKGKEKSILFPEEKQSFQDFEKELF 457
+K+ +E I E+ + ++ + F
Sbjct: 168 LKRQEEDIIYMDEDSEEEEESSDDEF 193
>Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical protein
T22C1.10b protein.
Length = 1291
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +2
Query: 254 DNKVDQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQ 427
D+ + +N+ K +V S P D + +EK+ R + + E + K+ I FP++K+
Sbjct: 836 DSYIRENVAKWIV-STPI-DTDTIEKLFPRDPSENLAEKGNEEDRRKQMIIDFPDDKE 891
>Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical protein
T22C1.10a protein.
Length = 1307
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +2
Query: 254 DNKVDQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQ 427
D+ + +N+ K +V S P D + +EK+ R + + E + K+ I FP++K+
Sbjct: 852 DSYIRENVAKWIV-STPI-DTDTIEKLFPRDPSENLAEKGNEEDRRKQMIIDFPDDKE 907
>Z70284-10|CAB54279.1| 351|Caenorhabditis elegans Hypothetical
protein K07F5.12 protein.
Length = 351
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 402 DFSLPFFTSVFSSKGFCFLALCII 331
D+ PF+TSVF F A C+I
Sbjct: 235 DYIFPFYTSVFLFSTLYFFAYCVI 258
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 355 LLFSPLYNFFNNIGICCRFGKN*QLFYILVNFIIISCVVRFFTSTFVWM 209
LLFS F N IC + LF+++ F+ + C V+ W+
Sbjct: 545 LLFSSTSQFGNITSICGLYALWISLFFVVELFLQVRCTVQLAYFLIAWI 593
>AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine
receptor, class z protein5 protein.
Length = 351
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 248 LCCSFFHFYFCMDEELLDLQTSNVSYHAFLVCCVL 144
L C F FY +L+L +V YH + + CV+
Sbjct: 75 LLCLFEMFYGFKIMNMLELDLFDVLYHYYFISCVI 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,635,612
Number of Sequences: 27780
Number of extensions: 267283
Number of successful extensions: 866
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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