Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_H02
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0226 + 23754513-23756914,23756972-23757050,23759296-23760153     29   3.2  
11_01_0606 + 4831102-4833033                                           29   4.3  
01_06_0236 - 27751430-27751600,27752029-27752278,27753131-27754050     28   7.5  
12_02_0068 + 13155402-13155568,13155674-13155767,13157748-131577...    27   9.9  
08_01_0398 - 3515439-3515573,3515965-3516516                           27   9.9  
07_01_0555 - 4125087-4125578                                           27   9.9  
01_05_0793 + 25278846-25279504,25279598-25279702,25280949-252810...    27   9.9  
01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,286...    27   9.9  

>04_04_0226 + 23754513-23756914,23756972-23757050,23759296-23760153
          Length = 1112

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 191 PKELAESWDNTGLLVEPYTPRQITKILLTND 283
           PKE A  W+N G     + PR I + + ++D
Sbjct: 264 PKEAARKWNNIGWTTVDFIPRNICQAIRSDD 294


>11_01_0606 + 4831102-4833033
          Length = 643

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -2

Query: 240 GSTNKPVLSQLSANSFGANFSSTVTTLSK 154
           G TN  VL+ LSANSF     ST+  LSK
Sbjct: 442 GMTNMEVLN-LSANSFSGEIPSTLVLLSK 469


>01_06_0236 - 27751430-27751600,27752029-27752278,27753131-27754050
          Length = 446

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 441 RHILVGIVCKAGSMTGWH 494
           R +L G VCK   +TGWH
Sbjct: 323 RVVLEGPVCKGNQVTGWH 340


>12_02_0068 +
           13155402-13155568,13155674-13155767,13157748-13157771,
           13157956-13158013,13158123-13158166,13158254-13158481
          Length = 204

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 516 DSATEKADANQSLTPPCTLSQLVCGEYRA 430
           +SA EKADA   + PP     +  G YR+
Sbjct: 8   ESAAEKADAAMVVAPPSNFGMVDTGVYRS 36


>08_01_0398 - 3515439-3515573,3515965-3516516
          Length = 228

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +2

Query: 248 PRQITKILLTNDLTEDVA-LEAEILACEMIISYHPPIFAPLKSIV---QRSWKERVVSYL 415
           PR  T+ L+  DL +++A LEAE  AC   +      FA L  +V   Q S  +   S  
Sbjct: 142 PRSETEKLIA-DLEKEIANLEAENTACIRTLELRKKQFALLLHVVEELQISIDDEQRSIA 200

Query: 416 LXKRIALYSPHTSWDSVQGGVNDWLA 493
              R A      S + V GG +D +A
Sbjct: 201 DELRAATEEQKMSIEEVSGGASDAMA 226


>07_01_0555 - 4125087-4125578
          Length = 163

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 381 SVRGKNGLYLIYXKNESPCTRHILVGIVCKAGSMT 485
           +V G N L  +  + E+P  RH++V I   AG  T
Sbjct: 26  NVAGNNVLLPLSNRTEAPTPRHVIVTISLDAGQNT 60


>01_05_0793 +
           25278846-25279504,25279598-25279702,25280949-25281071,
           25281167-25281337,25281440-25281569,25281797-25282039,
           25282084-25282202,25282269-25282331,25282423-25282486
          Length = 558

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 559 AGSEVGVV*L*NWLRLCDRESRCQPVIDPALHTIPT 452
           +G+EV +V    WL++     R + V+DP L   PT
Sbjct: 393 SGNEVNLV---EWLKIMVANRRAEEVVDPILEVRPT 425


>01_01_0365 -
           2859617-2859722,2860047-2860489,2862232-2862391,
           2863431-2863516,2863648-2866272
          Length = 1139

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 212 WDNTGLLVEPYTPRQITKILLTNDLTEDVAL-EAEILACEMI 334
           WD   ++V+ Y+P  +T  +L N+L +   L  AE+L  EM+
Sbjct: 676 WDQ--MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,433,050
Number of Sequences: 37544
Number of extensions: 348712
Number of successful extensions: 812
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)