Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_G23
(479 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 152 5e-36
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 133 2e-30
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 122 6e-27
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 97 2e-19
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 91 2e-17
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 84 1e-15
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 72 6e-12
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 69 5e-11
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 61 1e-08
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 56 3e-07
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 54 2e-06
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 50 4e-05
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 45 8e-04
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 45 8e-04
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 44 0.002
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 43 0.004
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 40 0.029
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 40 0.038
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 39 0.051
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 38 0.088
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 37 0.20
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 36 0.47
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 36 0.62
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 35 0.82
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 33 3.3
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 33 4.4
UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 32 5.8
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 32 7.7
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 152 bits (368), Expect = 5e-36
Identities = 70/85 (82%), Positives = 78/85 (91%)
Frame = +1
Query: 55 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAK 234
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGV AK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 235 QPNSAIRKCVRVQLIKNGKKVTAFV 309
QPNSAIRKCVRVQLIKNGKK+TAFV
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFV 85
Score = 106 bits (255), Expect = 2e-22
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = +2
Query: 311 PXDGCLNHIEXNDEVLXAGFGRKGHAVGDIPGVRFKVVKVXNVSLLALYKEKKERP 478
P DGCLN IE NDEVL AGFGRKGHAVGDIPGVRFKVVKV NVSLLALYK KKERP
Sbjct: 86 PNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERP 141
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 133 bits (321), Expect = 2e-30
Identities = 60/84 (71%), Positives = 72/84 (85%)
Frame = +1
Query: 58 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQ 237
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+ +KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 238 PNSAIRKCVRVQLIKNGKKVTAFV 309
PNSAIRKCVRVQLIKNGKKVTAFV
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFV 87
Score = 96.3 bits (229), Expect = 3e-19
Identities = 44/56 (78%), Positives = 48/56 (85%)
Frame = +2
Query: 311 PXDGCLNHIEXNDEVLXAGFGRKGHAVGDIPGVRFKVVKVXNVSLLALYKEKKERP 478
P DGCLN ++ NDEVL AGFGRKG A GDIPGVRFKVVKV VSLLAL+KEKKE+P
Sbjct: 88 PNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKP 143
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 122 bits (293), Expect = 6e-27
Identities = 55/83 (66%), Positives = 64/83 (77%)
Frame = +1
Query: 61 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQP 240
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+ AKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 241 NSAIRKCVRVQLIKNGKKVTAFV 309
NSAI KC RVQL+KNGKK+ AFV
Sbjct: 133 NSAICKCARVQLVKNGKKIAAFV 155
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 96.7 bits (230), Expect = 2e-19
Identities = 44/74 (59%), Positives = 58/74 (78%)
Frame = +1
Query: 85 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCV 264
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGV AKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 265 RVQLIKNGKKVTAF 306
R+QLIKNG+++TAF
Sbjct: 69 RIQLIKNGRQITAF 82
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 311 PXDGCLNHIEXNDEVLXAGFG-RKGHAVGDIPGVRFKVVKVXNVSLLALYKEKKERP 478
P DG +N I+ +DEV G G R G + GDIPGVRF+V KV +VSL + K+++P
Sbjct: 84 PGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKRDKP 140
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 90.6 bits (215), Expect = 2e-17
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +1
Query: 64 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPN 243
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGV A++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 244 SAIRKCVRVQLIKNGKKVTAFV 309
+A+RKCVRVQL+KNGK VTAFV
Sbjct: 67 AAVRKCVRVQLVKNGKVVTAFV 88
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = +2
Query: 311 PXDGCLNHIEXNDEVLXAGFGR-KGHAVGDIPGVRFKVVKVXNVSLLALYKEKKERP 478
P DG LN+I +DEV+ G +G ++GDIPGVRFKV+KV VSL A+++ KK++P
Sbjct: 89 PLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 84.2 bits (199), Expect = 1e-15
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +2
Query: 347 DEVLXAGFGRKGHAVGDIPGVRFKVVKVXNVSLLALYKEKKERP 478
DEVL AGFGRKGHAVGDIPGVRFKVVKV VSLLAL+KEKKE+P
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 267
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 72.1 bits (169), Expect = 6e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +1
Query: 64 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPN 243
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGV A++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 244 SAIRKCVRVQLIKN 285
+A+RKCV + N
Sbjct: 67 AAVRKCVTPDTLIN 80
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +2
Query: 311 PXDGCLNHIEXNDEVLXAGFGR-KGHAVGDIPGVRFKVVKVXNVSLLALYKEKKERP 478
P DG LN I +DEV+ G +G A GD+PGVRFKV KV VSL A+ KK++P
Sbjct: 603 PWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNGVSLKAILLGKKQKP 659
Score = 33.5 bits (73), Expect = 2.5
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 259 CVRVQLIKNGKKVTAFV 309
CVRVQL KNGK VTAFV
Sbjct: 586 CVRVQLTKNGKVVTAFV 602
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 68.9 bits (161), Expect = 5e-11
Identities = 39/88 (44%), Positives = 47/88 (53%)
Frame = -3
Query: 477 GRSFFSL*RARRDTLXTFTTLKRTPGMSPTA*PLRPNPAXSTSSFXSMWFRQPSXGDECG 298
G SFFS +A ++T T TTL TPG+SP A PL P PA TSSF S F+QPS G +
Sbjct: 8 GFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSFGTKAV 67
Query: 297 HFLSVLNELYTDAFADGRVGLLSXYTNF 214
FL L + F+ G L F
Sbjct: 68 TFLPFLINWTSTHFSIAEFGCLDSIPIF 95
Score = 54.0 bits (124), Expect = 2e-06
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -1
Query: 311 GTNAVTFFPFLMSCTRTHLRMAELGCLAXTPTFSRTMPFA 192
GT AVTF PFL++ T TH +AE GCL P FS+T+P A
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 61.3 bits (142), Expect = 1e-08
Identities = 35/91 (38%), Positives = 46/91 (50%)
Frame = -3
Query: 312 GDECGHFLSVLNELYTDAFADGRVGLLSXYTNFLEDDALCVRCTTERVSLPFRTHVGFLE 133
G E L VLNEL+ DA DGR+ L F + ++LC+R T +R+ L VGFL
Sbjct: 25 GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLV 84
Query: 132 FFVRPSLFTTVVHVLTRRSYSSGFTHLDSTT 40
FV P L +V L S ++ HL T
Sbjct: 85 LFVMPLLVPSVTAELPGSSETTTLAHLAGAT 115
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 56.4 bits (130), Expect = 3e-07
Identities = 32/86 (37%), Positives = 43/86 (50%)
Frame = -3
Query: 312 GDECGHFLSVLNELYTDAFADGRVGLLSXYTNFLEDDALCVRCTTERVSLPFRTHVGFLE 133
G E L VLNEL+ DA DGR+ L F + ++LC+R +R+ L VGFL
Sbjct: 56 GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLV 115
Query: 132 FFVRPSLFTTVVHVLTRRSYSSGFTH 55
FV P L +V L S ++ H
Sbjct: 116 LFVMPLLVPSVTAELPGSSETTTLAH 141
Score = 38.3 bits (85), Expect = 0.088
Identities = 14/31 (45%), Positives = 26/31 (83%)
Frame = -2
Query: 457 VESEERHVGYFYHLKTNSGNVTDGVTFTTES 365
++S++R++GYF HLK +S ++T +TF+T+S
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKS 39
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +1
Query: 169 NPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
NPF GA AKG+VL+ + K+PNSA RKCV V+L NGK++TA++
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYI 128
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 347 DEVLXAGFGRKGHAVGDIPGVRFKVVK 427
DEVL +GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 49.6 bits (113), Expect = 4e-05
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +1
Query: 145 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
H+ + NP G AKG+VL+ V K+PNSA RKCV V+L NGK++ A++
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYI 66
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 45.2 bits (102), Expect = 8e-04
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 145 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
H+ T+ P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYI 109
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 45.2 bits (102), Expect = 8e-04
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 145 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
H+ T+ P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYI 95
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 145 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
H+ + P G KG+VL+ + K+PNSA RKCV V+L NGK++ A++
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYI 113
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 42.7 bits (96), Expect = 0.004
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +1
Query: 172 PFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
P G KG+VL+ + K+PNSA RKC RV+L NGK+V F+
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFI 106
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 39.9 bits (89), Expect = 0.029
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 157 KWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYI 67
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 39.5 bits (88), Expect = 0.038
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +1
Query: 196 KGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
+G++L + + K+PNSA+RKC RV+L NGK ++A +
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALI 126
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 39.1 bits (87), Expect = 0.051
Identities = 27/70 (38%), Positives = 38/70 (54%)
Frame = -3
Query: 309 DECGHFLSVLNELYTDAFADGRVGLLSXYTNFLEDDALCVRCTTERVSLPFRTHVGFLEF 130
+E HFL VL EL++DA ++G V LL + DDA C +E + L R H F
Sbjct: 70 NESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR-HC-FNVS 127
Query: 129 FVRPSLFTTV 100
+ PSL ++V
Sbjct: 128 CIVPSLLSSV 137
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 38.3 bits (85), Expect = 0.088
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 181 GASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
G SH KGIVL+ V K+PNS RKC V+L G +V A++
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYI 113
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 37.1 bits (82), Expect = 0.20
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +1
Query: 163 KANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
K P G KG+VL K+PNSA RKC RV+L G++ F+
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFI 95
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 35.9 bits (79), Expect = 0.47
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 181 GASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
G+ +G+ V K+PNSA+RK RV+L G+ VTA++
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYI 88
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 35.5 bits (78), Expect = 0.62
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 157 KWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
K K+ +GI L V K+PNSA+RK RV+L G +VTA++
Sbjct: 18 KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYI 67
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 35.1 bits (77), Expect = 0.82
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 196 KGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
KG+VL + + K+PNSA RK RV+L NG V+A++
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYI 95
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 33.1 bits (72), Expect = 3.3
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +1
Query: 22 PSVADWCRAIQMGKPRGIRT-ARKHVNHRREQRWADKEFKKAHMGTKWKANP--FGGASH 192
P+ A + R + M R + R + R + ++ + A TK K++ G
Sbjct: 21 PAKAAFARPVAMPVFRPATSFGRGFASSSRCEATINQIMRGARKSTKRKSSVPLLDGCFQ 80
Query: 193 AKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
K + + ++PNSA+RK RV+L NG+ TA++
Sbjct: 81 KKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYI 118
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 32.7 bits (71), Expect = 4.4
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 136 KKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
K + + K ++ F KG+ ++ K+PNSA+RK +++L KN K++ A++
Sbjct: 9 KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYI 65
>UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1;
Mesorhizobium sp. BNC1|Rep: Putative uncharacterized
protein - Mesorhizobium sp. (strain BNC1)
Length = 338
Score = 32.3 bits (70), Expect = 5.8
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -1
Query: 365 PPXVLRRFXRCGLGNRXRGTNAVTFFPFLMSCTRTHLRMAELGCLAXTPTFSRTMPFA 192
PP + + R L R P + R+H ++ E+ C P +S T+PFA
Sbjct: 215 PPQSWQAY-RATLAERHFHVALAPALPTAFNSARSHNKILEIACFGAAPVYSSTVPFA 271
>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 32.3 bits (70), Expect = 5.8
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 88 KHVNHRREQ--RWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKC 261
K H+R Q W K+F K + T+ + G H KG+++ K G + N + +
Sbjct: 26 KITKHKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEK 85
Query: 262 VRVQLIK 282
+++L++
Sbjct: 86 EKIELVQ 92
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 31.9 bits (69), Expect = 7.7
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 196 KGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
KG+ ++ K+PNSA RKC ++L NGK ++A++
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYI 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,292,862
Number of Sequences: 1657284
Number of extensions: 10448102
Number of successful extensions: 24070
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24067
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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