Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_G23
(479 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p pro... 175 3e-44
AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA... 175 3e-44
M19494-1|AAA28935.1| 140|Drosophila melanogaster protein ( D.me... 45 5e-05
BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p pro... 45 5e-05
AL133505-2|CAB65841.1| 140|Drosophila melanogaster EG:BACH59J11... 45 5e-05
AL133505-1|CAB63528.1| 154|Drosophila melanogaster EG:BACH59J11... 45 5e-05
AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB ... 45 5e-05
AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical kn... 42 3e-04
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot... 28 7.6
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro... 28 7.6
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot... 28 7.6
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P... 28 7.6
>AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p
protein.
Length = 143
Score = 175 bits (426), Expect = 3e-44
Identities = 77/85 (90%), Positives = 84/85 (98%)
Frame = +1
Query: 55 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAK 234
MGKPRG+RTARKHVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGV AK
Sbjct: 1 MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
Query: 235 QPNSAIRKCVRVQLIKNGKKVTAFV 309
QPNSAIRKCVRVQLIKNGKK+TAFV
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFV 85
Score = 106 bits (254), Expect = 2e-23
Identities = 50/56 (89%), Positives = 51/56 (91%)
Frame = +2
Query: 311 PXDGCLNHIEXNDEVLXAGFGRKGHAVGDIPGVRFKVVKVXNVSLLALYKEKKERP 478
P DG LN+IE NDEVL AGFGRKGHAVGDIPGVRFKVVKV NVSLLALYKEKKERP
Sbjct: 86 PRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 141
>AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA
protein.
Length = 143
Score = 175 bits (426), Expect = 3e-44
Identities = 77/85 (90%), Positives = 84/85 (98%)
Frame = +1
Query: 55 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAK 234
MGKPRG+RTARKHVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGV AK
Sbjct: 1 MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
Query: 235 QPNSAIRKCVRVQLIKNGKKVTAFV 309
QPNSAIRKCVRVQLIKNGKK+TAFV
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFV 85
Score = 106 bits (254), Expect = 2e-23
Identities = 50/56 (89%), Positives = 51/56 (91%)
Frame = +2
Query: 311 PXDGCLNHIEXNDEVLXAGFGRKGHAVGDIPGVRFKVVKVXNVSLLALYKEKKERP 478
P DG LN+IE NDEVL AGFGRKGHAVGDIPGVRFKVVKV NVSLLALYKEKKERP
Sbjct: 86 PRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 141
>M19494-1|AAA28935.1| 140|Drosophila melanogaster protein (
D.melanogaster tko (technical knockout) locus mRNA
encoding tko gene product,complete cds. ).
Length = 140
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 145 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
H+ T+ P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYI 95
>BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p
protein.
Length = 140
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 145 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
H+ T+ P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYI 95
>AL133505-2|CAB65841.1| 140|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 140
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 145 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
H+ T+ P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYI 95
>AL133505-1|CAB63528.1| 154|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 154
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 145 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
H+ T+ P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYI 109
>AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB
protein.
Length = 140
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 145 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
H+ T+ P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYI 95
>AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical
knockout protein protein.
Length = 140
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 145 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
H+ T+ P G AKG+VL+ + K+PNSA RKCV V+ GK++ A++
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR-HSTGKEMVAYI 95
>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 protein.
Length = 1228
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 200 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 99
PF PP VP++A L L R +RRW
Sbjct: 910 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 943
>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p protein.
Length = 1241
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 200 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 99
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 protein.
Length = 1241
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 200 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 99
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
protein.
Length = 1241
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 200 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 99
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,785,739
Number of Sequences: 53049
Number of extensions: 480478
Number of successful extensions: 1441
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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