Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G23
         (479 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...   156   9e-39
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    38   0.003
U41011-4|AAA82287.1|  294|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    28   4.0  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    28   4.0  
AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical ...    27   7.0  
U97402-2|AAB63409.2|  393|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U97402-1|ABB51193.1|  393|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score =  156 bits (378), Expect = 9e-39
 Identities = 69/85 (81%), Positives = 78/85 (91%)
 Frame = +1

Query: 55  MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAK 234
           MGKP+G+ TARK   HR+EQRW DK +KKAH+GT+WK+NPFGGASHAKGIVLEK+GV AK
Sbjct: 1   MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAK 60

Query: 235 QPNSAIRKCVRVQLIKNGKKVTAFV 309
           QPNSAIRKCVRVQLIKNGKK+TAFV
Sbjct: 61  QPNSAIRKCVRVQLIKNGKKITAFV 85



 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 43/56 (76%), Positives = 48/56 (85%)
 Frame = +2

Query: 311 PXDGCLNHIEXNDEVLXAGFGRKGHAVGDIPGVRFKVVKVXNVSLLALYKEKKERP 478
           P DGCLN +E NDEVL +GFGR GHAVGDIPGVRFK+VKV N SL+AL+K KKERP
Sbjct: 86  PNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERP 141


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = +1

Query: 181 GASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 309
           G SH KGIVL+ V    K+PNS  RKC  V+L   G +V A++
Sbjct: 72  GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYI 113


>U41011-4|AAA82287.1|  294|Caenorhabditis elegans Hypothetical
           protein D2024.4 protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 126 VRPSLFTTVVHVLTRRSYSSG 64
           VRP + TTV+HV+ R    SG
Sbjct: 189 VRPGIMTTVIHVMDRNPMKSG 209


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 420 TLKRTPGMSPTA*PLRPNPAXSTSS 346
           T  RTP  +P A P RP P+ S+++
Sbjct: 38  TTMRTPAATPAAPPTRPTPSRSSAA 62


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 420 TLKRTPGMSPTA*PLRPNPAXSTSS 346
           T  RTP  +P A P RP P+ S+++
Sbjct: 167 TTMRTPAATPAAPPTRPTPSRSSAA 191


>AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.4 protein.
          Length = 466

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -3

Query: 150 HVGFLEFFVRPSLFTTVVHVLTRRS--YSSGFTHLDSTTPIGYGWE 19
           HV  +E+  R      VV V T+ +  +++G+T L  TT   YGW+
Sbjct: 158 HVWQIEWPERQRGTHAVVGVATKNAPLHAAGYTALIGTTDESYGWD 203


>U97402-2|AAB63409.2|  393|Caenorhabditis elegans Hypothetical
           protein C30H7.2a protein.
          Length = 393

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 31  ADWCRAIQMGKPRGIRTARKHVNHRREQ-RWADKEFKKAH-MGTKWKANPF 177
           ADWCR  QM KP  +  + K  +    +  WA  +  K + + TK+  N +
Sbjct: 43  ADWCRFSQMLKPIFLEASEKFKDAAPGKIMWASVDADKNNDIATKYHVNKY 93


>U97402-1|ABB51193.1|  393|Caenorhabditis elegans Hypothetical
           protein C30H7.2b protein.
          Length = 393

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 31  ADWCRAIQMGKPRGIRTARKHVNHRREQ-RWADKEFKKAH-MGTKWKANPF 177
           ADWCR  QM KP  +  + K  +    +  WA  +  K + + TK+  N +
Sbjct: 43  ADWCRFSQMLKPIFLEASEKFKDAAPGKIMWASVDADKNNDIATKYHVNKY 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,541,273
Number of Sequences: 27780
Number of extensions: 239477
Number of successful extensions: 489
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)