Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G22
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 576 LERGGQPTGLKFSLTEEFPKEPHEY 650
           L  G +     F  T E P EP +Y
Sbjct: 201 LRNGEKHHSFPFRKTTEIPPEPEDY 225


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 92  TTQTFNSFVFVFNKCQGKEQPLY 24
           ++++FN  + VF+K   +E+P Y
Sbjct: 115 SSESFNEDIAVFSKQIRQEKPYY 137


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 122 LCVSLRQLSYTTQTFNSFVFVFNKCQG 42
           + VSLRQ+   +Q  +  V +FN   G
Sbjct: 214 IIVSLRQIGSLSQLLSETVALFNDVFG 240


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 122 LCVSLRQLSYTTQTFNSFVFVFNKCQG 42
           + VSLRQ+   +Q  +  V +FN   G
Sbjct: 214 IIVSLRQIGSLSQLLSETVALFNDVFG 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,359
Number of Sequences: 336
Number of extensions: 3450
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)